RNA–Protein interactions for RNA: ENST00000378300.9

TPM2-204, Transcript of tropomyosin 2, humanhuman

TSL 3 BASIC

Gene TPM2, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-204ENST00000378300 PGAP2Q9UHJ9 254 aa16.57■□□□□ 0.24
TPM2-204ENST00000378300 ANGEL1Q9UNK9 670 aaKnown RBP16.57■□□□□ 0.24
TPM2-204ENST00000378300 TNKSO95271 1327 aa16.57■□□□□ 0.24
TPM2-204ENST00000378300 COL2A1P02458 1487 aaPredicted RBP16.57■□□□□ 0.24
TPM2-204ENST00000378300 RAB11FIP4Q86YS3 637 aa16.56■□□□□ 0.24
TPM2-204ENST00000378300 ZNF444Q8N0Y2 327 aaPredicted RBP16.56■□□□□ 0.24
TPM2-204ENST00000378300 L3MBTL3Q96JM7 780 aaPredicted RBP16.56■□□□□ 0.24
TPM2-204ENST00000378300 ZSCAN10Q96SZ4 725 aaPredicted RBP16.56■□□□□ 0.24
TPM2-204ENST00000378300 UBAC1Q9BSL1 405 aa16.56■□□□□ 0.24
TPM2-204ENST00000378300 IL17RBQ9NRM6 502 aa16.56■□□□□ 0.24
TPM2-204ENST00000378300 ZC3H4Q9UPT8 1303 aaKnown RBP16.56■□□□□ 0.24
TPM2-204ENST00000378300 SEC23AQ15436 765 aa16.56■□□□□ 0.24
TPM2-204ENST00000378300 CRACR2BQ8N4Y2 399 aaPredicted RBP16.56■□□□□ 0.24
TPM2-204ENST00000378300 ENAHQ8N8S7 591 aaPredicted RBP16.56■□□□□ 0.24
TPM2-204ENST00000378300 ADARB2Q9NS39 739 aaKnown RBP16.56■□□□□ 0.24
TPM2-204ENST00000378300 GGA3Q9NZ52 723 aa16.56■□□□□ 0.24
TPM2-204ENST00000378300 NAP1L2Q9ULW6 460 aaPredicted RBP16.56■□□□□ 0.24
TPM2-204ENST00000378300 KLF18A0A0U1RQI7 1052 aa16.55■□□□□ 0.24
TPM2-204ENST00000378300 TSPY3P0CV98 308 aa16.55■□□□□ 0.24
TPM2-204ENST00000378300 TSPY8P0CW00 308 aa16.55■□□□□ 0.24
TPM2-204ENST00000378300 CUL4AQ13619 759 aa16.55■□□□□ 0.24
TPM2-204ENST00000378300 SHROOM1Q2M3G4 852 aaPredicted RBP16.55■□□□□ 0.24
TPM2-204ENST00000378300 METTL16Q86W50 562 aaKnown RBP16.55■□□□□ 0.24
TPM2-204ENST00000378300 FOXP4Q8IVH2 680 aaPredicted RBP16.55■□□□□ 0.24
TPM2-204ENST00000378300 CCDC83Q8IWF9 413 aa16.55■□□□□ 0.24
TPM2-204ENST00000378300 ZNF287Q9HBT7 754 aa16.55■□□□□ 0.24
TPM2-204ENST00000378300 SWAP70Q9UH65 585 aa16.55■□□□□ 0.24
TPM2-204ENST00000378300 POTECB2RU33 542 aa16.54■□□□□ 0.24
TPM2-204ENST00000378300 HSP90AA1P07900 732 aaKnown RBP16.54■□□□□ 0.24
TPM2-204ENST00000378300 AKR1B1P15121 316 aa16.54■□□□□ 0.24
TPM2-204ENST00000378300 PDIA3P30101 505 aaKnown RBP16.54■□□□□ 0.24
TPM2-204ENST00000378300 EVCP57679 992 aa16.54■□□□□ 0.24
TPM2-204ENST00000378300 IQCA1Q86XH1 822 aa16.54■□□□□ 0.24
TPM2-204ENST00000378300 ZSCAN31Q96LW9 406 aaPredicted RBP16.54■□□□□ 0.24
TPM2-204ENST00000378300 TEPSINQ96N21 525 aa16.54■□□□□ 0.24
TPM2-204ENST00000378300 MYL10Q9BUA6 226 aa16.54■□□□□ 0.24
TPM2-204ENST00000378300 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.54■□□□□ 0.24
TPM2-204ENST00000378300 DEFB129Q9H1M3 183 aa16.54■□□□□ 0.24
TPM2-204ENST00000378300 SLKQ9H2G2 1235 aaPredicted RBP16.54■□□□□ 0.24
TPM2-204ENST00000378300 MYH8P13535 1937 aa16.54■□□□□ 0.24
TPM2-204ENST00000378300 RXRAP19793 462 aa16.54■□□□□ 0.24
TPM2-204ENST00000378300 LIFRP42702 1097 aa16.54■□□□□ 0.24
TPM2-204ENST00000378300 TNNI2P48788 182 aa16.54■□□□□ 0.24
TPM2-204ENST00000378300 CCT2P78371 535 aaKnown RBP16.54■□□□□ 0.24
TPM2-204ENST00000378300 RRP1BQ14684 758 aaKnown RBP16.54■□□□□ 0.24
TPM2-204ENST00000378300 WTAPQ15007 396 aa16.54■□□□□ 0.24
TPM2-204ENST00000378300 SART3Q15020 963 aaKnown RBP16.54■□□□□ 0.24
TPM2-204ENST00000378300 PRAMEF18Q5VWM3 479 aa16.54■□□□□ 0.24
TPM2-204ENST00000378300 RCSD1Q6JBY9 416 aa16.54■□□□□ 0.24
TPM2-204ENST00000378300 MIGA2Q7L4E1 593 aa16.54■□□□□ 0.24
TPM2-204ENST00000378300 SH2B1Q9NRF2 756 aaPredicted RBP16.54■□□□□ 0.24
TPM2-204ENST00000378300 HPS5Q9UPZ3 1129 aa16.54■□□□□ 0.24
TPM2-204ENST00000378300 ERICH2A1L162 156 aa16.53■□□□□ 0.24
TPM2-204ENST00000378300 SCRN1Q12765 414 aa16.53■□□□□ 0.24
TPM2-204ENST00000378300 TNFAIP1Q13829 316 aa16.53■□□□□ 0.24
TPM2-204ENST00000378300 TATDN1Q6P1N9 297 aa16.53■□□□□ 0.24
TPM2-204ENST00000378300 APOA5Q6Q788 366 aa16.53■□□□□ 0.24
TPM2-204ENST00000378300 DLK2Q6UY11 383 aa16.53■□□□□ 0.24
TPM2-204ENST00000378300 NFXL1Q6ZNB6 911 aa16.53■□□□□ 0.24
TPM2-204ENST00000378300 CLEC10AQ8IUN9 316 aa16.53■□□□□ 0.24
TPM2-204ENST00000378300 NEDD1Q8NHV4 660 aa16.53■□□□□ 0.24
TPM2-204ENST00000378300 MTA3Q9BTC8 594 aa16.53■□□□□ 0.24
TPM2-204ENST00000378300 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.53■□□□□ 0.24
TPM2-204ENST00000378300 NCOA5Q9HCD5 579 aaKnown RBP16.53■□□□□ 0.24
TPM2-204ENST00000378300 POLR2AP24928 1970 aaKnown RBP16.52■□□□□ 0.24
TPM2-204ENST00000378300 GOLGA8BA8MQT2 603 aa16.52■□□□□ 0.24
TPM2-204ENST00000378300 EPHX2P34913 555 aa16.52■□□□□ 0.24
TPM2-204ENST00000378300 JAG1P78504 1218 aa16.52■□□□□ 0.24
TPM2-204ENST00000378300 SGMS1Q86VZ5 419 aa16.52■□□□□ 0.24
TPM2-204ENST00000378300 ZNF274Q96GC6 653 aaPredicted RBP16.52■□□□□ 0.24
TPM2-204ENST00000378300 TRIM34Q9BYJ4 488 aa16.52■□□□□ 0.24
TPM2-204ENST00000378300 CCDC69A6NI79 296 aa16.51■□□□□ 0.23
TPM2-204ENST00000378300 GDF11O95390 407 aa16.51■□□□□ 0.23
TPM2-204ENST00000378300 IFIT1BQ5T764 474 aaKnown RBP16.51■□□□□ 0.23
TPM2-204ENST00000378300 NBPF12Q5TAG4 269 aaPredicted RBP16.51■□□□□ 0.23
TPM2-204ENST00000378300 CCDC144CPQ8IYA2 1237 aa16.51■□□□□ 0.23
TPM2-204ENST00000378300 GTF3C6Q969F1 213 aa16.51■□□□□ 0.23
TPM2-204ENST00000378300 PFKFB2O60825 505 aa16.51■□□□□ 0.23
TPM2-204ENST00000378300 CERKLQ49MI3 558 aaPredicted RBP16.51■□□□□ 0.23
TPM2-204ENST00000378300 MICU3Q86XE3 530 aa16.51■□□□□ 0.23
TPM2-204ENST00000378300 APOBEC3FQ8IUX4 373 aaKnown RBP16.51■□□□□ 0.23
TPM2-204ENST00000378300 CEP95Q96GE4 821 aa16.51■□□□□ 0.23
TPM2-204ENST00000378300 TCP11L1Q9NUJ3 509 aa16.51■□□□□ 0.23
TPM2-204ENST00000378300 HERC5Q9UII4 1024 aaKnown RBP16.51■□□□□ 0.23
TPM2-204ENST00000378300 SLC12A7Q9Y666 1083 aa16.51■□□□□ 0.23
TPM2-204ENST00000378300 MPHOSPH10O00566 681 aaKnown RBP16.5■□□□□ 0.23
TPM2-204ENST00000378300 PPFIA3O75145 1194 aa16.5■□□□□ 0.23
TPM2-204ENST00000378300 TAF1DQ9H5J8 278 aaPredicted RBP16.5■□□□□ 0.23
TPM2-204ENST00000378300 PLIN4Q96Q06 1357 aa16.5■□□□□ 0.23
TPM2-204ENST00000378300 IGKV6D-41A0A0C4DH26 115 aa16.49■□□□□ 0.23
TPM2-204ENST00000378300 NT5C2P49902 561 aa16.49■□□□□ 0.23
TPM2-204ENST00000378300 DGKHQ86XP1 1220 aa16.49■□□□□ 0.23
TPM2-204ENST00000378300 ZNF654Q8IZM8 581 aa16.49■□□□□ 0.23
TPM2-204ENST00000378300 TMTC2Q8N394 836 aa16.49■□□□□ 0.23
TPM2-204ENST00000378300 INTS4Q96HW7 963 aaKnown RBP16.49■□□□□ 0.23
TPM2-204ENST00000378300 STX8Q9UNK0 236 aa16.49■□□□□ 0.23
TPM2-204ENST00000378300 WDR90Q96KV7 1748 aa16.49■□□□□ 0.23
TPM2-204ENST00000378300 SCN4AP35499 1836 aa16.49■□□□□ 0.23
TPM2-204ENST00000378300 GREB1LQ9C091 1923 aaPredicted RBP16.49■□□□□ 0.23
TPM2-204ENST00000378300 ZBTB43O43298 467 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms