RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 SARSP49591 514 aaKnown RBP17.99■□□□□ 0.47
CKAP4-201ENST00000378026 WHAMMP3Q1A5X7 153 aa17.99■□□□□ 0.47
CKAP4-201ENST00000378026 APTXQ7Z2E3 356 aaKnown RBP17.99■□□□□ 0.47
CKAP4-201ENST00000378026 NBPF3Q9H094 633 aa17.99■□□□□ 0.47
CKAP4-201ENST00000378026 EHD4Q9H223 541 aa17.99■□□□□ 0.47
CKAP4-201ENST00000378026 SLC52A2Q9HAB3 445 aa17.99■□□□□ 0.47
CKAP4-201ENST00000378026 FBXO2Q9UK22 296 aaPredicted RBP17.99■□□□□ 0.47
CKAP4-201ENST00000378026 SYNRGQ9UMZ2 1314 aa17.99■□□□□ 0.47
CKAP4-201ENST00000378026 CCT5P48643 541 aa17.98■□□□□ 0.47
CKAP4-201ENST00000378026 TTC19Q6DKK2 380 aaPredicted RBP17.98■□□□□ 0.47
CKAP4-201ENST00000378026 XAGE2Q96GT9 111 aa17.98■□□□□ 0.47
CKAP4-201ENST00000378026 NAA15Q9BXJ9 866 aaKnown RBP17.98■□□□□ 0.47
CKAP4-201ENST00000378026 CSRNP2Q9H175 543 aa17.98■□□□□ 0.47
CKAP4-201ENST00000378026 ADD3Q9UEY8 706 aaKnown RBP17.98■□□□□ 0.47
CKAP4-201ENST00000378026 TTF2Q9UNY4 1162 aaKnown RBP17.98■□□□□ 0.47
CKAP4-201ENST00000378026 SH2B2O14492 632 aaPredicted RBP17.98■□□□□ 0.47
CKAP4-201ENST00000378026 GCP02774 474 aa17.98■□□□□ 0.47
CKAP4-201ENST00000378026 WWC3Q9ULE0 1092 aa17.98■□□□□ 0.47
CKAP4-201ENST00000378026 LTN1O94822 1766 aa17.98■□□□□ 0.47
CKAP4-201ENST00000378026 GGCXP38435 758 aa17.97■□□□□ 0.47
CKAP4-201ENST00000378026 SSRP1Q08945 709 aaKnown RBP17.97■□□□□ 0.47
CKAP4-201ENST00000378026 SAFBQ15424 915 aaKnown RBP eCLIP17.97■□□□□ 0.47
CKAP4-201ENST00000378026 TMEM67Q5HYA8 995 aa17.97■□□□□ 0.47
CKAP4-201ENST00000378026 TADA2BQ86TJ2 420 aa17.97■□□□□ 0.47
CKAP4-201ENST00000378026 APPBP2Q92624 585 aa17.97■□□□□ 0.47
CKAP4-201ENST00000378026 N4BP3O15049 544 aa17.97■□□□□ 0.47
CKAP4-201ENST00000378026 SNRPA1P09661 255 aaKnown RBP17.97■□□□□ 0.47
CKAP4-201ENST00000378026 SPATA1Q5VX52 437 aa17.97■□□□□ 0.47
CKAP4-201ENST00000378026 LRP10Q7Z4F1 713 aa17.97■□□□□ 0.47
CKAP4-201ENST00000378026 KCNH5Q8NCM2 988 aa17.97■□□□□ 0.47
CKAP4-201ENST00000378026 EPSTI1Q96J88 318 aa17.97■□□□□ 0.47
CKAP4-201ENST00000378026 CHP1Q99653 195 aa17.97■□□□□ 0.47
CKAP4-201ENST00000378026 ZBTB3Q9H5J0 574 aa17.97■□□□□ 0.47
CKAP4-201ENST00000378026 PTPREP23469 700 aa17.97■□□□□ 0.47
CKAP4-201ENST00000378026 ARHGAP25P42331 645 aa17.97■□□□□ 0.47
CKAP4-201ENST00000378026 CNGA4Q8IV77 575 aa17.97■□□□□ 0.47
CKAP4-201ENST00000378026 ZKSCAN3Q9BRR0 538 aa17.97■□□□□ 0.47
CKAP4-201ENST00000378026 YY1AP1Q9H869 796 aa17.97■□□□□ 0.47
CKAP4-201ENST00000378026 TBX22Q9Y458 520 aa17.97■□□□□ 0.47
CKAP4-201ENST00000378026 CPDO75976 1380 aa17.96■□□□□ 0.47
CKAP4-201ENST00000378026 PES1O00541 588 aaKnown RBP17.96■□□□□ 0.47
CKAP4-201ENST00000378026 ACTN4O43707 911 aaKnown RBP17.96■□□□□ 0.47
CKAP4-201ENST00000378026 NTRK3Q16288 839 aa17.96■□□□□ 0.47
CKAP4-201ENST00000378026 TTLL7Q6ZT98 887 aa17.96■□□□□ 0.47
CKAP4-201ENST00000378026 EFCAB13Q8IY85 973 aa17.96■□□□□ 0.47
CKAP4-201ENST00000378026 MMS19Q96T76 1030 aa17.96■□□□□ 0.47
CKAP4-201ENST00000378026 STIM1Q13586 685 aa17.96■□□□□ 0.47
CKAP4-201ENST00000378026 NT5DC1Q5TFE4 455 aa17.96■□□□□ 0.47
CKAP4-201ENST00000378026 CABP5Q9NP86 173 aa17.96■□□□□ 0.47
CKAP4-201ENST00000378026 HPCAL4Q9UM19 191 aa17.96■□□□□ 0.47
CKAP4-201ENST00000378026 CTNND2Q9UQB3 1225 aa17.96■□□□□ 0.47
CKAP4-201ENST00000378026 RRP12Q5JTH9 1297 aaKnown RBP17.95■□□□□ 0.46
CKAP4-201ENST00000378026 OXER1Q8TDS5 423 aa17.95■□□□□ 0.46
CKAP4-201ENST00000378026 CRACR2AQ9BSW2 395 aa17.95■□□□□ 0.46
CKAP4-201ENST00000378026 BRMS1Q9HCU9 246 aa17.95■□□□□ 0.46
CKAP4-201ENST00000378026 FAM217BQ9NTX9 383 aaPredicted RBP17.95■□□□□ 0.46
CKAP4-201ENST00000378026 GEMIN8Q9NWZ8 242 aaKnown RBP17.95■□□□□ 0.46
CKAP4-201ENST00000378026 TAB2Q9NYJ8 693 aa17.95■□□□□ 0.46
CKAP4-201ENST00000378026 A0A087X0B3 334 aa17.95■□□□□ 0.46
CKAP4-201ENST00000378026 ERCC5P28715 1186 aaPredicted RBP17.95■□□□□ 0.46
CKAP4-201ENST00000378026 KRT9P35527 623 aa17.95■□□□□ 0.46
CKAP4-201ENST00000378026 MRPS25P82663 173 aaKnown RBP17.95■□□□□ 0.46
CKAP4-201ENST00000378026 NLRP2Q9NX02 1062 aa17.95■□□□□ 0.46
CKAP4-201ENST00000378026 ZNF330Q9Y3S2 320 aaPredicted RBP17.95■□□□□ 0.46
CKAP4-201ENST00000378026 SLC12A7Q9Y666 1083 aa17.95■□□□□ 0.46
CKAP4-201ENST00000378026 MARF1Q9Y4F3 1742 aaKnown RBP17.95■□□□□ 0.46
CKAP4-201ENST00000378026 IDH1O75874 414 aaKnown RBP17.95■□□□□ 0.46
CKAP4-201ENST00000378026 PRPF6O94906 941 aaKnown RBP17.95■□□□□ 0.46
CKAP4-201ENST00000378026 TUBB2AQ13885 445 aa17.95■□□□□ 0.46
CKAP4-201ENST00000378026 TUBB2BQ9BVA1 445 aa17.95■□□□□ 0.46
CKAP4-201ENST00000378026 KAT14Q9H8E8 782 aa17.95■□□□□ 0.46
CKAP4-201ENST00000378026 ABHD10Q9NUJ1 306 aa17.95■□□□□ 0.46
CKAP4-201ENST00000378026 MAPK8IP1Q9UQF2 711 aa17.95■□□□□ 0.46
CKAP4-201ENST00000378026 EXOC5O00471 708 aa17.94■□□□□ 0.46
CKAP4-201ENST00000378026 IFIT3O14879 490 aaKnown RBP17.94■□□□□ 0.46
CKAP4-201ENST00000378026 MYBL2P10244 700 aa17.94■□□□□ 0.46
CKAP4-201ENST00000378026 ZC3H6P61129 1189 aaKnown RBP17.94■□□□□ 0.46
CKAP4-201ENST00000378026 FKBP15Q5T1M5 1219 aa17.94■□□□□ 0.46
CKAP4-201ENST00000378026 FBXW10Q5XX13 1052 aa17.94■□□□□ 0.46
CKAP4-201ENST00000378026 TMTC1Q8IUR5 882 aa17.94■□□□□ 0.46
CKAP4-201ENST00000378026 RAPGEF4Q8WZA2 1011 aa17.94■□□□□ 0.46
CKAP4-201ENST00000378026 FAM205CA6NFA0 338 aa17.94■□□□□ 0.46
CKAP4-201ENST00000378026 H7C1W4 665 aa17.94■□□□□ 0.46
CKAP4-201ENST00000378026 ERLIN2O94905 339 aa17.94■□□□□ 0.46
CKAP4-201ENST00000378026 ATP1A1P05023 1023 aaKnown RBP17.94■□□□□ 0.46
CKAP4-201ENST00000378026 PBX1P40424 430 aa17.94■□□□□ 0.46
CKAP4-201ENST00000378026 USP14P54578 494 aa17.94■□□□□ 0.46
CKAP4-201ENST00000378026 PLBD2Q8NHP8 589 aa17.94■□□□□ 0.46
CKAP4-201ENST00000378026 MYCBPQ99417 103 aaPredicted RBP17.94■□□□□ 0.46
CKAP4-201ENST00000378026 BLZF1Q9H2G9 400 aa17.94■□□□□ 0.46
CKAP4-201ENST00000378026 GPR108Q9NPR9 543 aa17.94■□□□□ 0.46
CKAP4-201ENST00000378026 CWC25Q9NXE8 425 aaPredicted RBP17.94■□□□□ 0.46
CKAP4-201ENST00000378026 LMO7Q8WWI1 1683 aa17.94■□□□□ 0.46
CKAP4-201ENST00000378026 A0A087WUV0 522 aaPredicted RBP17.93■□□□□ 0.46
CKAP4-201ENST00000378026 ZFYP08048 801 aaPredicted RBP17.93■□□□□ 0.46
CKAP4-201ENST00000378026 AMPD2Q01433 879 aa17.93■□□□□ 0.46
CKAP4-201ENST00000378026 WDR93Q6P2C0 686 aa17.93■□□□□ 0.46
CKAP4-201ENST00000378026 MSL3Q8N5Y2 521 aaKnown RBP17.93■□□□□ 0.46
CKAP4-201ENST00000378026 TRIML1Q8N9V2 468 aa17.93■□□□□ 0.46
CKAP4-201ENST00000378026 CAGE1Q8TC20 777 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms