RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 TTF1Q15361 905 aaPredicted RBP20.53■□□□□ 0.88
GNE-201ENST00000377902 EARS2Q5JPH6 523 aaKnown RBP20.53■□□□□ 0.88
GNE-201ENST00000377902 CREBRFQ8IUR6 639 aa20.53■□□□□ 0.88
GNE-201ENST00000377902 STAMQ92783 540 aa20.53■□□□□ 0.88
GNE-201ENST00000377902 SUGCTQ9HAC7 445 aa20.53■□□□□ 0.88
GNE-201ENST00000377902 TBC1D2BQ9UPU7 963 aa20.53■□□□□ 0.88
GNE-201ENST00000377902 A0A1B0GTH6 734 aa20.52■□□□□ 0.88
GNE-201ENST00000377902 VGLL3A8MV65 326 aa20.52■□□□□ 0.88
GNE-201ENST00000377902 PDE8BO95263 885 aa20.52■□□□□ 0.88
GNE-201ENST00000377902 CCDC175P0C221 793 aa20.52■□□□□ 0.88
GNE-201ENST00000377902 TXLNAP40222 546 aa20.52■□□□□ 0.88
GNE-201ENST00000377902 RTN1Q16799 776 aa20.52■□□□□ 0.88
GNE-201ENST00000377902 IGSF22Q8N9C0 903 aa20.52■□□□□ 0.88
GNE-201ENST00000377902 ASAP1Q9ULH1 1129 aa20.52■□□□□ 0.88
GNE-201ENST00000377902 ADGRG1Q9Y653 693 aa20.52■□□□□ 0.88
GNE-201ENST00000377902 PATL2C9JE40 543 aaKnown RBP20.52■□□□□ 0.88
GNE-201ENST00000377902 WNT7AO00755 349 aa20.52■□□□□ 0.88
GNE-201ENST00000377902 PLCD1P51178 756 aa20.52■□□□□ 0.88
GNE-201ENST00000377902 WWC2Q6AWC2 1192 aa20.52■□□□□ 0.88
GNE-201ENST00000377902 KIF6Q6ZMV9 814 aa20.52■□□□□ 0.88
GNE-201ENST00000377902 RGS22Q8NE09 1264 aa20.52■□□□□ 0.88
GNE-201ENST00000377902 PLA2G12BQ9BX93 195 aa20.52■□□□□ 0.88
GNE-201ENST00000377902 ABCC12Q96J65 1359 aa20.52■□□□□ 0.88
GNE-201ENST00000377902 ADAMTSL3P82987 1691 aa20.52■□□□□ 0.88
GNE-201ENST00000377902 MST1RQ04912 1400 aa20.52■□□□□ 0.87
GNE-201ENST00000377902 ANKRD18BA2A2Z9 1011 aa20.51■□□□□ 0.87
GNE-201ENST00000377902 ATP8B1O43520 1251 aa20.51■□□□□ 0.87
GNE-201ENST00000377902 RILPL1Q5EBL4 403 aa20.51■□□□□ 0.87
GNE-201ENST00000377902 ANKZF1Q9H8Y5 726 aa20.51■□□□□ 0.87
GNE-201ENST00000377902 SRPRBQ9Y5M8 271 aaKnown RBP20.51■□□□□ 0.87
GNE-201ENST00000377902 ATRNO75882 1429 aa20.51■□□□□ 0.87
GNE-201ENST00000377902 STK36Q9NRP7 1315 aa20.51■□□□□ 0.87
GNE-201ENST00000377902 GSG1L2A8MUP6 293 aa20.51■□□□□ 0.87
GNE-201ENST00000377902 TULP2O00295 520 aa20.51■□□□□ 0.87
GNE-201ENST00000377902 CHMP4BP1P59074 171 aa20.51■□□□□ 0.87
GNE-201ENST00000377902 MCM6Q14566 821 aa20.51■□□□□ 0.87
GNE-201ENST00000377902 AKNAD1Q5T1N1 836 aa20.51■□□□□ 0.87
GNE-201ENST00000377902 MFSD6Q6ZSS7 791 aa20.51■□□□□ 0.87
GNE-201ENST00000377902 PNKPQ96T60 521 aa20.51■□□□□ 0.87
GNE-201ENST00000377902 CTSWP56202 376 aa20.5■□□□□ 0.87
GNE-201ENST00000377902 RAD51AP2Q09MP3 1159 aa20.5■□□□□ 0.87
GNE-201ENST00000377902 TRIM28Q13263 835 aaKnown RBP20.5■□□□□ 0.87
GNE-201ENST00000377902 ZNF569Q5MCW4 686 aa20.5■□□□□ 0.87
GNE-201ENST00000377902 TRIM22Q8IYM9 498 aa20.5■□□□□ 0.87
GNE-201ENST00000377902 CRACR2BQ8N4Y2 399 aaPredicted RBP20.5■□□□□ 0.87
GNE-201ENST00000377902 DACH1Q9UI36 760 aa20.5■□□□□ 0.87
GNE-201ENST00000377902 CASP14P31944 242 aa20.5■□□□□ 0.87
GNE-201ENST00000377902 NOM1Q5C9Z4 860 aaKnown RBP20.5■□□□□ 0.87
GNE-201ENST00000377902 NLRP10Q86W26 655 aa20.5■□□□□ 0.87
GNE-201ENST00000377902 ELOA2Q8IYF1 753 aaPredicted RBP20.5■□□□□ 0.87
GNE-201ENST00000377902 FOXP1Q9H334 677 aaPredicted RBP20.5■□□□□ 0.87
GNE-201ENST00000377902 UBR2Q8IWV8 1755 aa20.5■□□□□ 0.87
GNE-201ENST00000377902 PRDM1O75626 825 aa20.49■□□□□ 0.87
GNE-201ENST00000377902 WTAPQ15007 396 aa20.49■□□□□ 0.87
GNE-201ENST00000377902 MIGA1Q8NAN2 632 aa20.49■□□□□ 0.87
GNE-201ENST00000377902 ACRBPQ8NEB7 543 aa20.49■□□□□ 0.87
GNE-201ENST00000377902 SPATA20Q8TB22 786 aa20.49■□□□□ 0.87
GNE-201ENST00000377902 CDC5LQ99459 802 aaKnown RBP20.49■□□□□ 0.87
GNE-201ENST00000377902 ADAM21Q9UKJ8 722 aa20.49■□□□□ 0.87
GNE-201ENST00000377902 IRS4O14654 1257 aaPredicted RBP20.49■□□□□ 0.87
GNE-201ENST00000377902 CDC25AP30304 524 aa20.49■□□□□ 0.87
GNE-201ENST00000377902 FXR1P51114 621 aaKnown RBP eCLIP20.49■□□□□ 0.87
GNE-201ENST00000377902 PPFIBP1Q86W92 1011 aa20.49■□□□□ 0.87
GNE-201ENST00000377902 LCORLQ8N3X6 602 aa20.49■□□□□ 0.87
GNE-201ENST00000377902 VPS54Q9P1Q0 977 aa20.49■□□□□ 0.87
GNE-201ENST00000377902 N4BP1O75113 896 aaKnown RBP20.48■□□□□ 0.87
GNE-201ENST00000377902 CCT6AP40227 531 aaKnown RBP20.48■□□□□ 0.87
GNE-201ENST00000377902 DPYDQ12882 1025 aa20.48■□□□□ 0.87
GNE-201ENST00000377902 RASGRF1Q13972 1273 aa20.48■□□□□ 0.87
GNE-201ENST00000377902 SRGAP1Q7Z6B7 1085 aa20.48■□□□□ 0.87
GNE-201ENST00000377902 SPATA5Q8NB90 893 aa20.48■□□□□ 0.87
GNE-201ENST00000377902 WASF1Q92558 559 aa20.48■□□□□ 0.87
GNE-201ENST00000377902 ZFP91Q96JP5 570 aaPredicted RBP20.48■□□□□ 0.87
GNE-201ENST00000377902 PANX2Q96RD6 677 aa20.48■□□□□ 0.87
GNE-201ENST00000377902 STRN4Q9NRL3 753 aa20.48■□□□□ 0.87
GNE-201ENST00000377902 RNF225M0QZC1 329 aaPredicted RBP20.48■□□□□ 0.87
GNE-201ENST00000377902 ARID4AP29374 1257 aaPredicted RBP20.48■□□□□ 0.87
GNE-201ENST00000377902 TDO2P48775 406 aa20.48■□□□□ 0.87
GNE-201ENST00000377902 ZNF512BQ96KM6 892 aaPredicted RBP20.48■□□□□ 0.87
GNE-201ENST00000377902 PDE11AQ9HCR9 933 aa20.48■□□□□ 0.87
GNE-201ENST00000377902 ADD3Q9UEY8 706 aaKnown RBP20.48■□□□□ 0.87
GNE-201ENST00000377902 RHOXF2BP0C7M4 288 aa20.47■□□□□ 0.87
GNE-201ENST00000377902 LMAN1P49257 510 aa20.47■□□□□ 0.87
GNE-201ENST00000377902 PAGE5Q96GU1 130 aa20.47■□□□□ 0.87
GNE-201ENST00000377902 RHOXF2Q9BQY4 288 aa20.47■□□□□ 0.87
GNE-201ENST00000377902 PRDM11Q9NQV5 511 aa20.47■□□□□ 0.87
GNE-201ENST00000377902 TRMT112Q9UI30 125 aaKnown RBP20.47■□□□□ 0.87
GNE-201ENST00000377902 DEXIO95424 95 aa20.47■□□□□ 0.87
GNE-201ENST00000377902 CUL4BQ13620 913 aa20.47■□□□□ 0.87
GNE-201ENST00000377902 SPATA1Q5VX52 437 aa20.47■□□□□ 0.87
GNE-201ENST00000377902 GIGYF2Q6Y7W6 1299 aaKnown RBP20.47■□□□□ 0.87
GNE-201ENST00000377902 TXLNBQ8N3L3 684 aa20.47■□□□□ 0.87
GNE-201ENST00000377902 TRIML1Q8N9V2 468 aa20.47■□□□□ 0.87
GNE-201ENST00000377902 ZNF579Q8NAF0 562 aaKnown RBP20.47■□□□□ 0.87
GNE-201ENST00000377902 FANCBQ8NB91 859 aa20.47■□□□□ 0.87
GNE-201ENST00000377902 SYMPKQ92797 1274 aaKnown RBP20.47■□□□□ 0.87
GNE-201ENST00000377902 SLC4A4Q9Y6R1 1079 aa20.47■□□□□ 0.87
GNE-201ENST00000377902 SYNRGQ9UMZ2 1314 aa20.47■□□□□ 0.87
GNE-201ENST00000377902 CCDC151A5D8V7 595 aa20.46■□□□□ 0.87
GNE-201ENST00000377902 GYPCP04921 128 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms