RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 MCM9Q9NXL9 1143 aa20.29■□□□□ 0.84
HMGN4-201ENST00000377575 CPA4Q9UI42 421 aa20.29■□□□□ 0.84
HMGN4-201ENST00000377575 PNMA3Q9UL41 463 aa20.29■□□□□ 0.84
HMGN4-201ENST00000377575 ZBTB21Q9ULJ3 1066 aa20.29■□□□□ 0.84
HMGN4-201ENST00000377575 PTPN22Q9Y2R2 807 aa20.29■□□□□ 0.84
HMGN4-201ENST00000377575 GNRH1P01148 92 aa20.28■□□□□ 0.84
HMGN4-201ENST00000377575 CYP2C8P10632 490 aa20.28■□□□□ 0.84
HMGN4-201ENST00000377575 PABPC4Q13310 644 aaKnown RBP eCLIP20.28■□□□□ 0.84
HMGN4-201ENST00000377575 TATDN1Q6P1N9 297 aa20.28■□□□□ 0.84
HMGN4-201ENST00000377575 KBTBD3Q8NAB2 608 aa20.28■□□□□ 0.84
HMGN4-201ENST00000377575 WDR18Q9BV38 432 aa20.28■□□□□ 0.84
HMGN4-201ENST00000377575 DCP1AQ9NPI6 582 aaPredicted RBP20.28■□□□□ 0.84
HMGN4-201ENST00000377575 HMGCS2P54868 508 aa20.27■□□□□ 0.84
HMGN4-201ENST00000377575 LRRFIP1Q32MZ4 808 aaKnown RBP20.27■□□□□ 0.84
HMGN4-201ENST00000377575 AMOTL1Q8IY63 956 aa20.27■□□□□ 0.84
HMGN4-201ENST00000377575 SMCR8Q8TEV9 937 aaPredicted RBP20.27■□□□□ 0.84
HMGN4-201ENST00000377575 DDRGK1Q96HY6 314 aa20.27■□□□□ 0.84
HMGN4-201ENST00000377575 ATP8A2Q9NTI2 1148 aa20.27■□□□□ 0.84
HMGN4-201ENST00000377575 GLRX3O76003 335 aaKnown RBP20.26■□□□□ 0.83
HMGN4-201ENST00000377575 MX1P20591 662 aa20.26■□□□□ 0.83
HMGN4-201ENST00000377575 PLCD1P51178 756 aa20.26■□□□□ 0.83
HMGN4-201ENST00000377575 CAP1Q01518 475 aa20.26■□□□□ 0.83
HMGN4-201ENST00000377575 MTMR2Q13614 643 aa20.26■□□□□ 0.83
HMGN4-201ENST00000377575 SLFNL1Q499Z3 407 aa20.26■□□□□ 0.83
HMGN4-201ENST00000377575 CERKLQ49MI3 558 aaPredicted RBP20.26■□□□□ 0.83
HMGN4-201ENST00000377575 SH3D19Q5HYK7 790 aa20.26■□□□□ 0.83
HMGN4-201ENST00000377575 TMOD4Q9NZQ9 345 aa20.26■□□□□ 0.83
HMGN4-201ENST00000377575 TAOK2Q9UL54 1235 aa20.26■□□□□ 0.83
HMGN4-201ENST00000377575 RBBP6Q7Z6E9 1792 aaKnown RBP20.26■□□□□ 0.83
HMGN4-201ENST00000377575 GH2P01242 217 aa20.25■□□□□ 0.83
HMGN4-201ENST00000377575 ZFYP08048 801 aaPredicted RBP20.25■□□□□ 0.83
HMGN4-201ENST00000377575 BCRP11274 1271 aa20.25■□□□□ 0.83
HMGN4-201ENST00000377575 BACE1P56817 501 aa20.25■□□□□ 0.83
HMGN4-201ENST00000377575 TREML2Q5T2D2 321 aa20.25■□□□□ 0.83
HMGN4-201ENST00000377575 ARHGAP39Q9C0H5 1083 aa20.25■□□□□ 0.83
HMGN4-201ENST00000377575 C19orf81C9J6K1 198 aa20.24■□□□□ 0.83
HMGN4-201ENST00000377575 USP17L10C9JJH3 530 aa20.24■□□□□ 0.83
HMGN4-201ENST00000377575 SHMT1P34896 483 aa20.24■□□□□ 0.83
HMGN4-201ENST00000377575 RGS19P49795 217 aa20.24■□□□□ 0.83
HMGN4-201ENST00000377575 PRMT2P55345 433 aa20.24■□□□□ 0.83
HMGN4-201ENST00000377575 SOX10P56693 466 aa20.24■□□□□ 0.83
HMGN4-201ENST00000377575 JAG1P78504 1218 aa20.24■□□□□ 0.83
HMGN4-201ENST00000377575 GABPAQ06546 454 aa20.24■□□□□ 0.83
HMGN4-201ENST00000377575 ABCB5Q2M3G0 1257 aa20.24■□□□□ 0.83
HMGN4-201ENST00000377575 SHROOM1Q2M3G4 852 aaPredicted RBP20.24■□□□□ 0.83
HMGN4-201ENST00000377575 ANKRD45Q5TZF3 282 aa20.24■□□□□ 0.83
HMGN4-201ENST00000377575 CABP5Q9NP86 173 aa20.24■□□□□ 0.83
HMGN4-201ENST00000377575 SLC4A4Q9Y6R1 1079 aa20.24■□□□□ 0.83
HMGN4-201ENST00000377575 CENPFP49454 3210 aa20.23■□□□□ 0.83
HMGN4-201ENST00000377575 PRKAB2O43741 272 aa20.23■□□□□ 0.83
HMGN4-201ENST00000377575 CHGBP05060 677 aa20.23■□□□□ 0.83
HMGN4-201ENST00000377575 OSBPP22059 807 aa20.23■□□□□ 0.83
HMGN4-201ENST00000377575 PSMC4P43686 418 aa20.23■□□□□ 0.83
HMGN4-201ENST00000377575 PI4K2BQ8TCG2 481 aa20.23■□□□□ 0.83
HMGN4-201ENST00000377575 OTUD7AQ8TE49 926 aaPredicted RBP20.23■□□□□ 0.83
HMGN4-201ENST00000377575 APPBP2Q92624 585 aa20.23■□□□□ 0.83
HMGN4-201ENST00000377575 PUS7LQ9H0K6 701 aaKnown RBP20.23■□□□□ 0.83
HMGN4-201ENST00000377575 SWAP70Q9UH65 585 aa20.23■□□□□ 0.83
HMGN4-201ENST00000377575 RNF113AO15541 343 aaKnown RBP20.22■□□□□ 0.83
HMGN4-201ENST00000377575 HOXD10P28358 340 aa20.22■□□□□ 0.83
HMGN4-201ENST00000377575 FCGRTP55899 365 aa20.22■□□□□ 0.83
HMGN4-201ENST00000377575 RAB3GAP1Q15042 981 aa20.22■□□□□ 0.83
HMGN4-201ENST00000377575 FEZ1Q99689 392 aa20.22■□□□□ 0.83
HMGN4-201ENST00000377575 RWDD1Q9H446 243 aaPredicted RBP20.22■□□□□ 0.83
HMGN4-201ENST00000377575 PTCH2Q9Y6C5 1203 aa20.22■□□□□ 0.83
HMGN4-201ENST00000377575 FMNL1O95466 1100 aaPredicted RBP20.21■□□□□ 0.83
HMGN4-201ENST00000377575 GCLCP48506 637 aaPredicted RBP20.21■□□□□ 0.83
HMGN4-201ENST00000377575 IRX3P78415 501 aaPredicted RBP20.21■□□□□ 0.83
HMGN4-201ENST00000377575 MLLT1Q03111 559 aaPredicted RBP20.21■□□□□ 0.83
HMGN4-201ENST00000377575 SLC9C1Q4G0N8 1177 aa20.21■□□□□ 0.83
HMGN4-201ENST00000377575 USP17L2Q6R6M4 530 aa20.21■□□□□ 0.83
HMGN4-201ENST00000377575 TRIM47Q96LD4 638 aa20.21■□□□□ 0.83
HMGN4-201ENST00000377575 SALL3Q9BXA9 1300 aa20.21■□□□□ 0.83
HMGN4-201ENST00000377575 CYP2D6P10635 497 aa20.2■□□□□ 0.82
HMGN4-201ENST00000377575 USP14P54578 494 aa20.2■□□□□ 0.82
HMGN4-201ENST00000377575 FAM110CQ1W6H9 321 aa20.2■□□□□ 0.82
HMGN4-201ENST00000377575 NBPF11Q86T75 865 aa20.2■□□□□ 0.82
HMGN4-201ENST00000377575 EXOC6Q8TAG9 804 aa20.2■□□□□ 0.82
HMGN4-201ENST00000377575 ARMC5Q96C12 935 aa20.2■□□□□ 0.82
HMGN4-201ENST00000377575 FSD1Q9BTV5 496 aa20.2■□□□□ 0.82
HMGN4-201ENST00000377575 ASCC2Q9H1I8 757 aaPredicted RBP20.2■□□□□ 0.82
HMGN4-201ENST00000377575 ARPP21Q9UBL0 812 aaPredicted RBP20.2■□□□□ 0.82
HMGN4-201ENST00000377575 MPHOSPH10O00566 681 aaKnown RBP20.19■□□□□ 0.82
HMGN4-201ENST00000377575 ECM2O94769 699 aaPredicted RBP20.19■□□□□ 0.82
HMGN4-201ENST00000377575 CTGFP29279 349 aa20.19■□□□□ 0.82
HMGN4-201ENST00000377575 C12orf60Q5U649 245 aa20.19■□□□□ 0.82
HMGN4-201ENST00000377575 ANKRD13CQ8N6S4 541 aa20.19■□□□□ 0.82
HMGN4-201ENST00000377575 STRBPQ96SI9 672 aaKnown RBP20.19■□□□□ 0.82
HMGN4-201ENST00000377575 SRRDQ9UH36 339 aa20.19■□□□□ 0.82
HMGN4-201ENST00000377575 SUPT16HQ9Y5B9 1047 aaKnown RBP20.19■□□□□ 0.82
HMGN4-201ENST00000377575 MYPNQ86TC9 1320 aa20.19■□□□□ 0.82
HMGN4-201ENST00000377575 USP17L12C9JPN9 530 aa20.18■□□□□ 0.82
HMGN4-201ENST00000377575 USP17L21D6R901 530 aa20.18■□□□□ 0.82
HMGN4-201ENST00000377575 GNAT2P19087 354 aa20.18■□□□□ 0.82
HMGN4-201ENST00000377575 HOXA7P31268 230 aaPredicted RBP20.18■□□□□ 0.82
HMGN4-201ENST00000377575 HOXD11P31277 338 aaPredicted RBP20.18■□□□□ 0.82
HMGN4-201ENST00000377575 EVX2Q03828 476 aa20.18■□□□□ 0.82
HMGN4-201ENST00000377575 GIMAP6Q6P9H5 292 aa20.18■□□□□ 0.82
HMGN4-201ENST00000377575 OSBP2Q969R2 916 aa20.18■□□□□ 0.82
HMGN4-201ENST00000377575 GPAA1O43292 621 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms