RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 UPF3BQ9BZI7 483 aaKnown RBP25.18■■□□□ 1.62
CBWD3-202ENST00000377342 ZNF287Q9HBT7 754 aa25.18■■□□□ 1.62
CBWD3-202ENST00000377342 ZSWIM6Q9HCJ5 1215 aa25.18■■□□□ 1.62
CBWD3-202ENST00000377342 AKR1B1P15121 316 aa25.17■■□□□ 1.62
CBWD3-202ENST00000377342 JAG1P78504 1218 aa25.17■■□□□ 1.62
CBWD3-202ENST00000377342 TRDNQ13061 729 aa25.17■■□□□ 1.62
CBWD3-202ENST00000377342 FAM47AQ5JRC9 791 aa25.17■■□□□ 1.62
CBWD3-202ENST00000377342 RANBP6O60518 1105 aaKnown RBP25.17■■□□□ 1.62
CBWD3-202ENST00000377342 ESR2Q92731 530 aa25.17■■□□□ 1.62
CBWD3-202ENST00000377342 ZNF341Q9BYN7 854 aa25.17■■□□□ 1.62
CBWD3-202ENST00000377342 ZSWIM5Q9P217 1185 aa25.17■■□□□ 1.62
CBWD3-202ENST00000377342 PHIPQ8WWQ0 1821 aa25.16■■□□□ 1.62
CBWD3-202ENST00000377342 GDF11O95390 407 aa25.16■■□□□ 1.62
CBWD3-202ENST00000377342 TCEANC2Q96MN5 208 aa25.16■■□□□ 1.62
CBWD3-202ENST00000377342 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.16■■□□□ 1.62
CBWD3-202ENST00000377342 ZNF112Q9UJU3 913 aa25.16■■□□□ 1.62
CBWD3-202ENST00000377342 MYH4Q9Y623 1939 aa25.15■■□□□ 1.62
CBWD3-202ENST00000377342 RPS6KB1P23443 525 aa25.15■■□□□ 1.62
CBWD3-202ENST00000377342 PSMA5P28066 241 aa25.15■■□□□ 1.62
CBWD3-202ENST00000377342 CERKLQ49MI3 558 aaPredicted RBP25.15■■□□□ 1.62
CBWD3-202ENST00000377342 BLOC1S2Q6QNY1 142 aa25.15■■□□□ 1.62
CBWD3-202ENST00000377342 CHST3Q7LGC8 479 aa25.15■■□□□ 1.62
CBWD3-202ENST00000377342 USP2O75604 605 aaPredicted RBP25.14■■□□□ 1.62
CBWD3-202ENST00000377342 TFAP4Q01664 338 aa25.14■■□□□ 1.62
CBWD3-202ENST00000377342 EXOSC10Q01780 885 aaKnown RBP25.14■■□□□ 1.62
CBWD3-202ENST00000377342 PRKG1Q13976 671 aa25.14■■□□□ 1.62
CBWD3-202ENST00000377342 RUFY3Q7L099 469 aa25.14■■□□□ 1.62
CBWD3-202ENST00000377342 ZNF444Q8N0Y2 327 aaPredicted RBP25.14■■□□□ 1.62
CBWD3-202ENST00000377342 TSPY2A6NKD2 308 aa25.13■■□□□ 1.61
CBWD3-202ENST00000377342 INPP5BP32019 993 aa25.13■■□□□ 1.61
CBWD3-202ENST00000377342 NT5C2P49902 561 aa25.13■■□□□ 1.61
CBWD3-202ENST00000377342 DHX32Q7L7V1 743 aaKnown RBP25.13■■□□□ 1.61
CBWD3-202ENST00000377342 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.13■■□□□ 1.61
CBWD3-202ENST00000377342 KLRG1Q96E93 195 aa25.13■■□□□ 1.61
CBWD3-202ENST00000377342 WRNIP1Q96S55 665 aa25.13■■□□□ 1.61
CBWD3-202ENST00000377342 PASKQ96RG2 1323 aa25.13■■□□□ 1.61
CBWD3-202ENST00000377342 PRC1O43663 620 aa25.13■■□□□ 1.61
CBWD3-202ENST00000377342 NMT2O60551 498 aa25.13■■□□□ 1.61
CBWD3-202ENST00000377342 HMGB1P09429 215 aaKnown RBP25.13■■□□□ 1.61
CBWD3-202ENST00000377342 MCM5P33992 734 aa25.13■■□□□ 1.61
CBWD3-202ENST00000377342 NF2P35240 595 aa25.13■■□□□ 1.61
CBWD3-202ENST00000377342 MOB2Q70IA6 237 aa25.13■■□□□ 1.61
CBWD3-202ENST00000377342 NEDD1Q8NHV4 660 aa25.13■■□□□ 1.61
CBWD3-202ENST00000377342 CCDC17Q96LX7 622 aa25.13■■□□□ 1.61
CBWD3-202ENST00000377342 WDR19Q8NEZ3 1342 aa25.12■■□□□ 1.61
CBWD3-202ENST00000377342 IGKV6D-41A0A0C4DH26 115 aa25.12■■□□□ 1.61
CBWD3-202ENST00000377342 TSPY3P0CV98 308 aa25.12■■□□□ 1.61
CBWD3-202ENST00000377342 TSPY8P0CW00 308 aa25.12■■□□□ 1.61
CBWD3-202ENST00000377342 GUCY1A2P33402 732 aa25.12■■□□□ 1.61
CBWD3-202ENST00000377342 CAP2P40123 477 aa25.12■■□□□ 1.61
CBWD3-202ENST00000377342 RABEP1Q15276 862 aa25.12■■□□□ 1.61
CBWD3-202ENST00000377342 CLEC10AQ8IUN9 316 aa25.12■■□□□ 1.61
CBWD3-202ENST00000377342 SMC1BQ8NDV3 1235 aa25.12■■□□□ 1.61
CBWD3-202ENST00000377342 RBM46Q8TBY0 533 aaKnown RBP25.12■■□□□ 1.61
CBWD3-202ENST00000377342 TTC14Q96N46 770 aa25.12■■□□□ 1.61
CBWD3-202ENST00000377342 ZKSCAN3Q9BRR0 538 aa25.12■■□□□ 1.61
CBWD3-202ENST00000377342 LRRC2Q9BYS8 371 aa25.12■■□□□ 1.61
CBWD3-202ENST00000377342 ZNF408Q9H9D4 720 aa25.12■■□□□ 1.61
CBWD3-202ENST00000377342 IL17RBQ9NRM6 502 aa25.12■■□□□ 1.61
CBWD3-202ENST00000377342 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.12■■□□□ 1.61
CBWD3-202ENST00000377342 ZBTB21Q9ULJ3 1066 aa25.12■■□□□ 1.61
CBWD3-202ENST00000377342 CYP46A1Q9Y6A2 500 aa25.12■■□□□ 1.61
CBWD3-202ENST00000377342 TOMM70O94826 608 aa25.11■■□□□ 1.61
CBWD3-202ENST00000377342 GH2P01242 217 aa25.11■■□□□ 1.61
CBWD3-202ENST00000377342 ABCB5Q2M3G0 1257 aa25.11■■□□□ 1.61
CBWD3-202ENST00000377342 GPHNQ9NQX3 736 aaPredicted RBP25.11■■□□□ 1.61
CBWD3-202ENST00000377342 MAP3K11Q16584 847 aa25.1■■□□□ 1.61
CBWD3-202ENST00000377342 MPHOSPH10O00566 681 aaKnown RBP25.1■■□□□ 1.61
CBWD3-202ENST00000377342 PPP1R12BO60237 982 aaPredicted RBP25.1■■□□□ 1.61
CBWD3-202ENST00000377342 TSHZ2Q9NRE2 1034 aa25.1■■□□□ 1.61
CBWD3-202ENST00000377342 ANGEL1Q9UNK9 670 aaKnown RBP25.1■■□□□ 1.61
CBWD3-202ENST00000377342 TNKSO95271 1327 aa25.09■■□□□ 1.61
CBWD3-202ENST00000377342 CTNND1O60716 968 aaKnown RBP25.09■■□□□ 1.61
CBWD3-202ENST00000377342 CELF2O95319 508 aaKnown RBP25.09■■□□□ 1.61
CBWD3-202ENST00000377342 NEK4P51957 841 aa25.09■■□□□ 1.61
CBWD3-202ENST00000377342 SEC23AQ15436 765 aa25.09■■□□□ 1.61
CBWD3-202ENST00000377342 CST9Q5W186 159 aa25.09■■□□□ 1.61
CBWD3-202ENST00000377342 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.09■■□□□ 1.61
CBWD3-202ENST00000377342 TMEM179Q6ZVK1 233 aa25.09■■□□□ 1.61
CBWD3-202ENST00000377342 ZKSCAN4Q969J2 545 aaPredicted RBP25.09■■□□□ 1.61
CBWD3-202ENST00000377342 CEP95Q96GE4 821 aa25.09■■□□□ 1.61
CBWD3-202ENST00000377342 TCP11L1Q9NUJ3 509 aa25.09■■□□□ 1.61
CBWD3-202ENST00000377342 SH2B2O14492 632 aaPredicted RBP25.08■■□□□ 1.61
CBWD3-202ENST00000377342 SEPT2Q15019 361 aa25.08■■□□□ 1.61
CBWD3-202ENST00000377342 NOL9Q5SY16 702 aaKnown RBP25.08■■□□□ 1.61
CBWD3-202ENST00000377342 RCSD1Q6JBY9 416 aa25.08■■□□□ 1.61
CBWD3-202ENST00000377342 SCYL3Q8IZE3 742 aa25.08■■□□□ 1.61
CBWD3-202ENST00000377342 ENAHQ8N8S7 591 aaPredicted RBP25.08■■□□□ 1.61
CBWD3-202ENST00000377342 IGDCC4Q8TDY8 1250 aa25.08■■□□□ 1.61
CBWD3-202ENST00000377342 ZSCAN10Q96SZ4 725 aaPredicted RBP25.08■■□□□ 1.61
CBWD3-202ENST00000377342 SENP2Q9HC62 589 aa25.08■■□□□ 1.61
CBWD3-202ENST00000377342 PTPRFP10586 1907 aa25.08■■□□□ 1.61
CBWD3-202ENST00000377342 NOVP48745 357 aa25.07■■□□□ 1.6
CBWD3-202ENST00000377342 VGLL4Q14135 290 aa25.07■■□□□ 1.6
CBWD3-202ENST00000377342 IQCA1Q86XH1 822 aa25.07■■□□□ 1.6
CBWD3-202ENST00000377342 UBAC1Q9BSL1 405 aa25.07■■□□□ 1.6
CBWD3-202ENST00000377342 AGXT2Q9BYV1 514 aa25.07■■□□□ 1.6
CBWD3-202ENST00000377342 PDRG1Q9NUG6 133 aa25.07■■□□□ 1.6
CBWD3-202ENST00000377342 IREB2P48200 963 aaKnown RBP25.07■■□□□ 1.6
CBWD3-202ENST00000377342 TOB2Q14106 344 aaPredicted RBP25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms