RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 PLA2G4AP47712 749 aa15.12■□□□□ 0.01
ACTN1-202ENST00000376839 SRRTQ9BXP5 876 aaKnown RBP15.12■□□□□ 0.01
ACTN1-202ENST00000376839 KAT6BQ8WYB5 2073 aa15.12■□□□□ 0.01
ACTN1-202ENST00000376839 SEC31AO94979 1220 aaKnown RBP15.12■□□□□ 0.01
ACTN1-202ENST00000376839 DEXIO95424 95 aa15.12■□□□□ 0.01
ACTN1-202ENST00000376839 CABP5Q9NP86 173 aa15.12■□□□□ 0.01
ACTN1-202ENST00000376839 SRPRBQ9Y5M8 271 aaKnown RBP15.12■□□□□ 0.01
ACTN1-202ENST00000376839 SOS2Q07890 1332 aaPredicted RBP15.12■□□□□ 0.01
ACTN1-202ENST00000376839 NUP98P52948 1817 aa15.12■□□□□ 0.01
ACTN1-202ENST00000376839 DOCK2Q92608 1830 aa15.12■□□□□ 0.01
ACTN1-202ENST00000376839 A0A087X0B3 334 aa15.12■□□□□ 0.01
ACTN1-202ENST00000376839 EFCAB8A8MWE9 144 aa15.12■□□□□ 0.01
ACTN1-202ENST00000376839 STX10O60499 249 aa15.12■□□□□ 0.01
ACTN1-202ENST00000376839 BCAMP50895 628 aa15.12■□□□□ 0.01
ACTN1-202ENST00000376839 MTF1Q14872 753 aa15.12■□□□□ 0.01
ACTN1-202ENST00000376839 ZNF654Q8IZM8 581 aa15.12■□□□□ 0.01
ACTN1-202ENST00000376839 ARAP2Q8WZ64 1704 aa15.11■□□□□ 0.01
ACTN1-202ENST00000376839 CASQ1P31415 396 aa15.11■□□□□ 0.01
ACTN1-202ENST00000376839 SART3Q15020 963 aaKnown RBP15.11■□□□□ 0.01
ACTN1-202ENST00000376839 DZIP3Q86Y13 1208 aaKnown RBP15.11■□□□□ 0.01
ACTN1-202ENST00000376839 ZNF579Q8NAF0 562 aaKnown RBP15.11■□□□□ 0.01
ACTN1-202ENST00000376839 FANCBQ8NB91 859 aa15.11■□□□□ 0.01
ACTN1-202ENST00000376839 MPHOSPH8Q99549 860 aa15.11■□□□□ 0.01
ACTN1-202ENST00000376839 RAI14Q9P0K7 980 aa15.11■□□□□ 0.01
ACTN1-202ENST00000376839 ITGB4P16144 1822 aa15.11■□□□□ 0.01
ACTN1-202ENST00000376839 CASP1P29466 404 aa15.11■□□□□ 0.01
ACTN1-202ENST00000376839 KARSQ15046 597 aaKnown RBP15.11■□□□□ 0.01
ACTN1-202ENST00000376839 EARS2Q5JPH6 523 aaKnown RBP15.11■□□□□ 0.01
ACTN1-202ENST00000376839 TMCO3Q6UWJ1 677 aa15.11■□□□□ 0.01
ACTN1-202ENST00000376839 NUTM2AQ8IVF1 878 aaPredicted RBP15.11■□□□□ 0.01
ACTN1-202ENST00000376839 KIFC2Q96AC6 838 aa15.11■□□□□ 0.01
ACTN1-202ENST00000376839 DACH1Q9UI36 760 aa15.11■□□□□ 0.01
ACTN1-202ENST00000376839 TEX33O43247 280 aa15.1■□□□□ 0.01
ACTN1-202ENST00000376839 PLCD1P51178 756 aa15.1■□□□□ 0.01
ACTN1-202ENST00000376839 MAP3K9P80192 1104 aa15.1■□□□□ 0.01
ACTN1-202ENST00000376839 NR1I3Q14994 352 aa15.1■□□□□ 0.01
ACTN1-202ENST00000376839 SPATA20Q8TB22 786 aa15.1■□□□□ 0.01
ACTN1-202ENST00000376839 DHX58Q96C10 678 aa15.1■□□□□ 0.01
ACTN1-202ENST00000376839 NACAP1Q9BZK3 213 aa15.1■□□□□ 0.01
ACTN1-202ENST00000376839 ARGLU1Q9NWB6 273 aaPredicted RBP15.1■□□□□ 0.01
ACTN1-202ENST00000376839 hCG_1642624A0A1W2PR95 340 aa15.1■□□□□ 0.01
ACTN1-202ENST00000376839 ERICH2A1L162 156 aa15.1■□□□□ 0.01
ACTN1-202ENST00000376839 ZNF34Q8IZ26 560 aa15.1■□□□□ 0.01
ACTN1-202ENST00000376839 TRIML1Q8N9V2 468 aa15.1■□□□□ 0.01
ACTN1-202ENST00000376839 EPSTI1Q96J88 318 aa15.1■□□□□ 0.01
ACTN1-202ENST00000376839 MRPL44Q9H9J2 332 aaKnown RBP15.1■□□□□ 0.01
ACTN1-202ENST00000376839 ABCA3Q99758 1704 aa15.09■□□□□ 0.01
ACTN1-202ENST00000376839 XIRP1Q702N8 1843 aaKnown RBP15.09■□□□□ 0.01
ACTN1-202ENST00000376839 WNT7AO00755 349 aa15.09■□□□□ 0.01
ACTN1-202ENST00000376839 APTXQ7Z2E3 356 aaKnown RBP15.09■□□□□ 0.01
ACTN1-202ENST00000376839 NOL10Q9BSC4 688 aaKnown RBP15.09■□□□□ 0.01
ACTN1-202ENST00000376839 IRX2Q9BZI1 471 aaPredicted RBP15.09■□□□□ 0.01
ACTN1-202ENST00000376839 VPS54Q9P1Q0 977 aa15.09■□□□□ 0.01
ACTN1-202ENST00000376839 MRFAP1Q9Y605 127 aa15.09■□□□□ 0.01
ACTN1-202ENST00000376839 PNPLA7Q6ZV29 1317 aa15.09■□□□□ 0.01
ACTN1-202ENST00000376839 A0A1B0GTH6 734 aa15.09■□□□□ 0.01
ACTN1-202ENST00000376839 ERICH4A6NGS2 130 aa15.09■□□□□ 0.01
ACTN1-202ENST00000376839 CD44P16070 742 aaKnown RBP15.09■□□□□ 0.01
ACTN1-202ENST00000376839 AFMP43652 599 aa15.09■□□□□ 0.01
ACTN1-202ENST00000376839 STX17P56962 302 aa15.09■□□□□ 0.01
ACTN1-202ENST00000376839 PPP2R3AQ06190 1150 aa15.09■□□□□ 0.01
ACTN1-202ENST00000376839 SUSD4Q5VX71 490 aa15.09■□□□□ 0.01
ACTN1-202ENST00000376839 KLHL10Q6JEL2 608 aa15.09■□□□□ 0.01
ACTN1-202ENST00000376839 ADGRA1Q86SQ6 560 aa15.09■□□□□ 0.01
ACTN1-202ENST00000376839 SDR42E1Q8WUS8 393 aa15.09■□□□□ 0.01
ACTN1-202ENST00000376839 IQSEC3Q9UPP2 1182 aaPredicted RBP15.09■□□□□ 0.01
ACTN1-202ENST00000376839 A0A0U1RQJ8 604 aa15.08■□□□□ 0.01
ACTN1-202ENST00000376839 CCDC196A0A1B0GTZ2 297 aa15.08■□□□□ 0.01
ACTN1-202ENST00000376839 GOLGA6L9A6NEM1 432 aa15.08■□□□□ 0.01
ACTN1-202ENST00000376839 SOWAHDA6NJG2 315 aa15.08■□□□□ 0.01
ACTN1-202ENST00000376839 PRDM1O75626 825 aa15.08■□□□□ 0.01
ACTN1-202ENST00000376839 PPARAQ07869 468 aa15.08■□□□□ 0.01
ACTN1-202ENST00000376839 TEX35Q5T0J7 233 aa15.08■□□□□ 0.01
ACTN1-202ENST00000376839 ATRIPQ8WXE1 791 aa15.08■□□□□ 0.01
ACTN1-202ENST00000376839 UBAC1Q9BSL1 405 aa15.08■□□□□ 0.01
ACTN1-202ENST00000376839 BCL9O00512 1426 aa15.08■□□□□ 0.01
ACTN1-202ENST00000376839 MINDY4BA8MYZ0 360 aa15.08■□□□□ 0
ACTN1-202ENST00000376839 SASH3O75995 380 aa15.08■□□□□ 0
ACTN1-202ENST00000376839 GNAT2P19087 354 aa15.08■□□□□ 0
ACTN1-202ENST00000376839 CEP131Q9UPN4 1083 aa15.08■□□□□ 0
ACTN1-202ENST00000376839 TNKSO95271 1327 aa15.08■□□□□ 0
ACTN1-202ENST00000376839 BCORQ6W2J9 1755 aa15.08■□□□□ 0
ACTN1-202ENST00000376839 ERVV-1B6SEH8 477 aa15.07■□□□□ 0
ACTN1-202ENST00000376839 HSPA2P54652 639 aa15.07■□□□□ 0
ACTN1-202ENST00000376839 SEC23AQ15436 765 aa15.07■□□□□ 0
ACTN1-202ENST00000376839 KANK3Q6NY19 840 aa15.07■□□□□ 0
ACTN1-202ENST00000376839 SMYD4Q8IYR2 804 aaPredicted RBP15.07■□□□□ 0
ACTN1-202ENST00000376839 LRP2BPQ9P2M1 347 aa15.07■□□□□ 0
ACTN1-202ENST00000376839 TRIM75PA6NK02 468 aa15.07■□□□□ 0
ACTN1-202ENST00000376839 ERCC5P28715 1186 aaPredicted RBP15.07■□□□□ 0
ACTN1-202ENST00000376839 PKN1Q16512 942 aa15.07■□□□□ 0
ACTN1-202ENST00000376839 NOM1Q5C9Z4 860 aaKnown RBP15.07■□□□□ 0
ACTN1-202ENST00000376839 NHSL1Q5SYE7 1610 aa15.07■□□□□ 0
ACTN1-202ENST00000376839 AKR1B15C9JRZ8 316 aaPredicted RBP15.07■□□□□ 0
ACTN1-202ENST00000376839 CUL4BQ13620 913 aa15.07■□□□□ 0
ACTN1-202ENST00000376839 RAD9BQ6WBX8 426 aa15.07■□□□□ 0
ACTN1-202ENST00000376839 RSRC2Q7L4I2 434 aaKnown RBP15.07■□□□□ 0
ACTN1-202ENST00000376839 TMTC2Q8N394 836 aa15.07■□□□□ 0
ACTN1-202ENST00000376839 CPLX3Q8WVH0 158 aa15.07■□□□□ 0
ACTN1-202ENST00000376839 AATFQ9NY61 560 aaKnown RBP eCLIP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms