RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 SAP30BPQ9UHR5 308 aaKnown RBP18.29■□□□□ 0.52
CLCN6-204ENST00000376491 GJD2Q9UKL4 321 aa18.29■□□□□ 0.52
CLCN6-204ENST00000376491 ALPK3Q96L96 1907 aa18.28■□□□□ 0.52
CLCN6-204ENST00000376491 PEX10O60683 326 aa18.28■□□□□ 0.52
CLCN6-204ENST00000376491 IGSF3O75054 1194 aa18.28■□□□□ 0.52
CLCN6-204ENST00000376491 GDF11O95390 407 aa18.28■□□□□ 0.52
CLCN6-204ENST00000376491 CYP7A1P22680 504 aa18.28■□□□□ 0.52
CLCN6-204ENST00000376491 NDUFB9Q9Y6M9 179 aa18.28■□□□□ 0.52
CLCN6-204ENST00000376491 HOXA7P31268 230 aaPredicted RBP18.27■□□□□ 0.52
CLCN6-204ENST00000376491 CEP85Q6P2H3 762 aa18.27■□□□□ 0.52
CLCN6-204ENST00000376491 MIER1Q8N108 512 aa18.27■□□□□ 0.52
CLCN6-204ENST00000376491 CRACR2BQ8N4Y2 399 aaPredicted RBP18.27■□□□□ 0.52
CLCN6-204ENST00000376491 P2RX7Q99572 595 aaKnown RBP18.27■□□□□ 0.52
CLCN6-204ENST00000376491 CRISPLD2Q9H0B8 497 aa18.27■□□□□ 0.52
CLCN6-204ENST00000376491 RBM27Q9P2N5 1060 aaKnown RBP18.27■□□□□ 0.52
CLCN6-204ENST00000376491 MORF4L1Q9UBU8 362 aa18.27■□□□□ 0.52
CLCN6-204ENST00000376491 IDH1O75874 414 aaKnown RBP18.26■□□□□ 0.51
CLCN6-204ENST00000376491 TFRCP02786 760 aaKnown RBP18.26■□□□□ 0.51
CLCN6-204ENST00000376491 TRIM32Q13049 653 aa18.26■□□□□ 0.51
CLCN6-204ENST00000376491 MIGA1Q8NAN2 632 aa18.26■□□□□ 0.51
CLCN6-204ENST00000376491 ANTXR1Q9H6X2 564 aa18.26■□□□□ 0.51
CLCN6-204ENST00000376491 TXNRD2Q9NNW7 524 aa18.26■□□□□ 0.51
CLCN6-204ENST00000376491 TMOD4Q9NZQ9 345 aa18.26■□□□□ 0.51
CLCN6-204ENST00000376491 ZBTB21Q9ULJ3 1066 aa18.26■□□□□ 0.51
CLCN6-204ENST00000376491 C19orf81C9J6K1 198 aa18.25■□□□□ 0.51
CLCN6-204ENST00000376491 USP17L10C9JJH3 530 aa18.25■□□□□ 0.51
CLCN6-204ENST00000376491 IRX3P78415 501 aaPredicted RBP18.25■□□□□ 0.51
CLCN6-204ENST00000376491 MAGEB6Q8N7X4 407 aa18.25■□□□□ 0.51
CLCN6-204ENST00000376491 TRIM34Q9BYJ4 488 aa18.25■□□□□ 0.51
CLCN6-204ENST00000376491 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.25■□□□□ 0.51
CLCN6-204ENST00000376491 PRO3102Q9H379 93 aa18.25■□□□□ 0.51
CLCN6-204ENST00000376491 GINM1Q9NU53 330 aa18.25■□□□□ 0.51
CLCN6-204ENST00000376491 EXOC6BQ9Y2D4 811 aa18.25■□□□□ 0.51
CLCN6-204ENST00000376491 HMGCRP04035 888 aa18.24■□□□□ 0.51
CLCN6-204ENST00000376491 HLA-DOAP06340 250 aa18.24■□□□□ 0.51
CLCN6-204ENST00000376491 POTEEQ6S8J3 1075 aa18.24■□□□□ 0.51
CLCN6-204ENST00000376491 EMILIN3Q9NT22 766 aa18.24■□□□□ 0.51
CLCN6-204ENST00000376491 CAPN2P17655 700 aa18.23■□□□□ 0.51
CLCN6-204ENST00000376491 HERVK_113P62684 666 aa18.23■□□□□ 0.51
CLCN6-204ENST00000376491 Q3C1V9 767 aa18.23■□□□□ 0.51
CLCN6-204ENST00000376491 PANK1Q8TE04 598 aa18.23■□□□□ 0.51
CLCN6-204ENST00000376491 DIS3LQ8TF46 1054 aaKnown RBP18.23■□□□□ 0.51
CLCN6-204ENST00000376491 TRIB2Q92519 343 aa18.23■□□□□ 0.51
CLCN6-204ENST00000376491 PAWRQ96IZ0 340 aaKnown RBP18.23■□□□□ 0.51
CLCN6-204ENST00000376491 RBPJLQ9UBG7 517 aa18.23■□□□□ 0.51
CLCN6-204ENST00000376491 NR2E3Q9Y5X4 410 aa18.23■□□□□ 0.51
CLCN6-204ENST00000376491 GH2P01242 217 aa18.22■□□□□ 0.51
CLCN6-204ENST00000376491 CYP2B6P20813 491 aa18.22■□□□□ 0.51
CLCN6-204ENST00000376491 USP5P45974 858 aa18.22■□□□□ 0.51
CLCN6-204ENST00000376491 TATDN1Q6P1N9 297 aa18.22■□□□□ 0.51
CLCN6-204ENST00000376491 AACSQ86V21 672 aa18.22■□□□□ 0.51
CLCN6-204ENST00000376491 RPTORQ8N122 1335 aa18.22■□□□□ 0.51
CLCN6-204ENST00000376491 USP17L2Q6R6M4 530 aa18.21■□□□□ 0.51
CLCN6-204ENST00000376491 GPRC5AQ8NFJ5 357 aa18.21■□□□□ 0.51
CLCN6-204ENST00000376491 IL1RAPL2Q9NP60 686 aa18.21■□□□□ 0.51
CLCN6-204ENST00000376491 RANBP2P49792 3224 aaKnown RBP18.21■□□□□ 0.51
CLCN6-204ENST00000376491 EVI5O60447 810 aa18.2■□□□□ 0.5
CLCN6-204ENST00000376491 MNX1P50219 401 aaPredicted RBP18.2■□□□□ 0.5
CLCN6-204ENST00000376491 ERVK-9P63128 1117 aa18.2■□□□□ 0.5
CLCN6-204ENST00000376491 ERVK-24P63145 666 aa18.2■□□□□ 0.5
CLCN6-204ENST00000376491 MAP3K12Q12852 859 aa18.2■□□□□ 0.5
CLCN6-204ENST00000376491 NUDT12Q9BQG2 462 aa18.2■□□□□ 0.5
CLCN6-204ENST00000376491 RIOK1Q9BRS2 568 aaKnown RBP18.2■□□□□ 0.5
CLCN6-204ENST00000376491 EHD4Q9H223 541 aa18.2■□□□□ 0.5
CLCN6-204ENST00000376491 PORCNQ9H237 461 aa18.2■□□□□ 0.5
CLCN6-204ENST00000376491 HMX1Q9NP08 348 aaPredicted RBP18.2■□□□□ 0.5
CLCN6-204ENST00000376491 SERPINB13Q9UIV8 391 aa18.2■□□□□ 0.5
CLCN6-204ENST00000376491 DDX60LQ5H9U9 1706 aaKnown RBP18.2■□□□□ 0.5
CLCN6-204ENST00000376491 MAP3K21Q5TCX8 1036 aa18.19■□□□□ 0.5
CLCN6-204ENST00000376491 NECAB2Q7Z6G3 386 aa18.19■□□□□ 0.5
CLCN6-204ENST00000376491 CERS3Q8IU89 383 aa18.19■□□□□ 0.5
CLCN6-204ENST00000376491 ERC1Q8IUD2 1116 aa18.19■□□□□ 0.5
CLCN6-204ENST00000376491 RHPN1Q8TCX5 695 aa18.19■□□□□ 0.5
CLCN6-204ENST00000376491 USP6NLQ92738 828 aa18.19■□□□□ 0.5
CLCN6-204ENST00000376491 C12orf42Q96LP6 360 aa18.19■□□□□ 0.5
CLCN6-204ENST00000376491 SZT2Q5T011 3432 aa18.19■□□□□ 0.5
CLCN6-204ENST00000376491 NAV1Q8NEY1 1877 aa18.18■□□□□ 0.5
CLCN6-204ENST00000376491 XRCC5P13010 732 aaKnown RBP18.18■□□□□ 0.5
CLCN6-204ENST00000376491 PLCD1P51178 756 aa18.18■□□□□ 0.5
CLCN6-204ENST00000376491 ZYXQ15942 572 aaKnown RBP18.18■□□□□ 0.5
CLCN6-204ENST00000376491 TTC6Q86TZ1 520 aa18.18■□□□□ 0.5
CLCN6-204ENST00000376491 ANKLE1Q8NAG6 615 aa18.18■□□□□ 0.5
CLCN6-204ENST00000376491 SOCS4Q8WXH5 440 aa18.18■□□□□ 0.5
CLCN6-204ENST00000376491 PAGR1Q9BTK6 254 aa18.18■□□□□ 0.5
CLCN6-204ENST00000376491 ZBED9Q6R2W3 1325 aa18.18■□□□□ 0.5
CLCN6-204ENST00000376491 CNMDO75829 334 aa18.17■□□□□ 0.5
CLCN6-204ENST00000376491 PRKAR2AP13861 404 aaKnown RBP18.17■□□□□ 0.5
CLCN6-204ENST00000376491 MAPK4P31152 587 aa18.17■□□□□ 0.5
CLCN6-204ENST00000376491 GUCY1A2P33402 732 aa18.17■□□□□ 0.5
CLCN6-204ENST00000376491 SHMT1P34896 483 aa18.17■□□□□ 0.5
CLCN6-204ENST00000376491 EVX2Q03828 476 aa18.17■□□□□ 0.5
CLCN6-204ENST00000376491 MORN1Q5T089 497 aa18.17■□□□□ 0.5
CLCN6-204ENST00000376491 TMED8Q6PL24 325 aaPredicted RBP18.17■□□□□ 0.5
CLCN6-204ENST00000376491 GPR142Q7Z601 462 aa18.17■□□□□ 0.5
CLCN6-204ENST00000376491 ACER1Q8TDN7 264 aa18.17■□□□□ 0.5
CLCN6-204ENST00000376491 GTF3C2Q8WUA4 911 aaPredicted RBP18.17■□□□□ 0.5
CLCN6-204ENST00000376491 OGDHLQ9ULD0 1010 aa18.17■□□□□ 0.5
CLCN6-204ENST00000376491 RAB3GAP1Q15042 981 aa18.16■□□□□ 0.5
CLCN6-204ENST00000376491 CCL14Q16627 93 aa18.16■□□□□ 0.5
CLCN6-204ENST00000376491 ABCB5Q2M3G0 1257 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms