RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 CD209Q9NNX6 404 aa17.29■□□□□ 0.36
CCHCR1-201ENST00000376266 GNL3LQ9NVN8 582 aaKnown RBP17.29■□□□□ 0.36
CCHCR1-201ENST00000376266 FER1L6Q2WGJ9 1857 aa17.29■□□□□ 0.36
CCHCR1-201ENST00000376266 UQCRFS1P1P0C7P4 283 aa17.29■□□□□ 0.36
CCHCR1-201ENST00000376266 SMC1AQ14683 1233 aaKnown RBP17.29■□□□□ 0.36
CCHCR1-201ENST00000376266 ZNF512BQ96KM6 892 aaPredicted RBP17.29■□□□□ 0.36
CCHCR1-201ENST00000376266 SRRTQ9BXP5 876 aaKnown RBP17.29■□□□□ 0.36
CCHCR1-201ENST00000376266 XPO4Q9C0E2 1151 aaKnown RBP17.29■□□□□ 0.36
CCHCR1-201ENST00000376266 G3V3G9 751 aa17.28■□□□□ 0.36
CCHCR1-201ENST00000376266 TRIM66O15016 1216 aa17.28■□□□□ 0.36
CCHCR1-201ENST00000376266 NMIQ13287 307 aaPredicted RBP17.28■□□□□ 0.36
CCHCR1-201ENST00000376266 DCAF8Q5TAQ9 597 aa17.28■□□□□ 0.36
CCHCR1-201ENST00000376266 CARD6Q9BX69 1037 aa17.28■□□□□ 0.36
CCHCR1-201ENST00000376266 UBXN6Q9BZV1 441 aa17.28■□□□□ 0.36
CCHCR1-201ENST00000376266 IFNKQ9P0W0 207 aa17.28■□□□□ 0.36
CCHCR1-201ENST00000376266 HMG20BQ9P0W2 317 aa17.28■□□□□ 0.36
CCHCR1-201ENST00000376266 JAG2Q9Y219 1238 aa17.28■□□□□ 0.36
CCHCR1-201ENST00000376266 PHLPP2Q6ZVD8 1323 aa17.28■□□□□ 0.36
CCHCR1-201ENST00000376266 TADA3O75528 432 aa17.28■□□□□ 0.36
CCHCR1-201ENST00000376266 KCNJ6P48051 423 aa17.28■□□□□ 0.36
CCHCR1-201ENST00000376266 GPR162Q16538 588 aa17.28■□□□□ 0.36
CCHCR1-201ENST00000376266 ALDH8A1Q9H2A2 487 aaPredicted RBP17.28■□□□□ 0.36
CCHCR1-201ENST00000376266 LCMT1Q9UIC8 334 aa17.28■□□□□ 0.36
CCHCR1-201ENST00000376266 EFCAB8A8MWE9 144 aa17.27■□□□□ 0.36
CCHCR1-201ENST00000376266 CCP110O43303 1012 aa17.27■□□□□ 0.36
CCHCR1-201ENST00000376266 ZAP70P43403 619 aa17.27■□□□□ 0.36
CCHCR1-201ENST00000376266 PRELPP51888 382 aa17.27■□□□□ 0.36
CCHCR1-201ENST00000376266 LARGE2Q8N3Y3 721 aa17.27■□□□□ 0.36
CCHCR1-201ENST00000376266 SPATA5Q8NB90 893 aa17.27■□□□□ 0.36
CCHCR1-201ENST00000376266 CCDC34Q96HJ3 373 aa17.27■□□□□ 0.36
CCHCR1-201ENST00000376266 HAUS7Q99871 368 aa17.27■□□□□ 0.36
CCHCR1-201ENST00000376266 COA1Q9GZY4 146 aa17.27■□□□□ 0.36
CCHCR1-201ENST00000376266 SASH3O75995 380 aa17.27■□□□□ 0.35
CCHCR1-201ENST00000376266 TBC1D8O95759 1140 aa17.27■□□□□ 0.35
CCHCR1-201ENST00000376266 IARSP41252 1262 aaKnown RBP17.27■□□□□ 0.35
CCHCR1-201ENST00000376266 ZRSR1Q15695 479 aaKnown RBP17.27■□□□□ 0.35
CCHCR1-201ENST00000376266 ZBTB9Q96C00 473 aa17.27■□□□□ 0.35
CCHCR1-201ENST00000376266 RCOR1Q9UKL0 485 aa17.27■□□□□ 0.35
CCHCR1-201ENST00000376266 IL1R1P14778 569 aa17.26■□□□□ 0.35
CCHCR1-201ENST00000376266 EVCP57679 992 aa17.26■□□□□ 0.35
CCHCR1-201ENST00000376266 FAM160A1Q05DH4 1040 aa17.26■□□□□ 0.35
CCHCR1-201ENST00000376266 DHX8Q14562 1220 aaKnown RBP17.26■□□□□ 0.35
CCHCR1-201ENST00000376266 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.26■□□□□ 0.35
CCHCR1-201ENST00000376266 FTOQ9C0B1 505 aaKnown RBP eCLIP17.26■□□□□ 0.35
CCHCR1-201ENST00000376266 KCNQ5Q9NR82 932 aa17.26■□□□□ 0.35
CCHCR1-201ENST00000376266 TAF6LQ9Y6J9 622 aa17.26■□□□□ 0.35
CCHCR1-201ENST00000376266 COL1A1P02452 1464 aaPredicted RBP17.26■□□□□ 0.35
CCHCR1-201ENST00000376266 HIP1O00291 1037 aa17.26■□□□□ 0.35
CCHCR1-201ENST00000376266 GOLIM4O00461 696 aa17.26■□□□□ 0.35
CCHCR1-201ENST00000376266 CASQ1P31415 396 aa17.26■□□□□ 0.35
CCHCR1-201ENST00000376266 LRRFIP1Q32MZ4 808 aaKnown RBP17.26■□□□□ 0.35
CCHCR1-201ENST00000376266 FSIP1Q8NA03 581 aa17.26■□□□□ 0.35
CCHCR1-201ENST00000376266 EPC1Q9H2F5 836 aa17.26■□□□□ 0.35
CCHCR1-201ENST00000376266 ECE2O60344 883 aa17.25■□□□□ 0.35
CCHCR1-201ENST00000376266 FOSBP53539 338 aa17.25■□□□□ 0.35
CCHCR1-201ENST00000376266 CC2D1AQ6P1N0 951 aaPredicted RBP17.25■□□□□ 0.35
CCHCR1-201ENST00000376266 SDF4Q9BRK5 362 aa17.25■□□□□ 0.35
CCHCR1-201ENST00000376266 TMX1Q9H3N1 280 aa17.25■□□□□ 0.35
CCHCR1-201ENST00000376266 COL4A5P29400 1685 aa17.25■□□□□ 0.35
CCHCR1-201ENST00000376266 AKAP11Q9UKA4 1901 aa17.25■□□□□ 0.35
CCHCR1-201ENST00000376266 ENGASEQ8NFI3 743 aa17.25■□□□□ 0.35
CCHCR1-201ENST00000376266 GOLGA5Q8TBA6 731 aa17.25■□□□□ 0.35
CCHCR1-201ENST00000376266 PAG1Q9NWQ8 432 aa17.25■□□□□ 0.35
CCHCR1-201ENST00000376266 DENND2AQ9ULE3 1009 aa17.25■□□□□ 0.35
CCHCR1-201ENST00000376266 LTBP3Q9NS15 1303 aa17.25■□□□□ 0.35
CCHCR1-201ENST00000376266 DHX16O60231 1041 aaKnown RBP17.24■□□□□ 0.35
CCHCR1-201ENST00000376266 ADD1P35611 737 aaKnown RBP17.24■□□□□ 0.35
CCHCR1-201ENST00000376266 NOP2P46087 812 aaKnown RBP17.24■□□□□ 0.35
CCHCR1-201ENST00000376266 ME1P48163 572 aa17.24■□□□□ 0.35
CCHCR1-201ENST00000376266 LMAN1P49257 510 aa17.24■□□□□ 0.35
CCHCR1-201ENST00000376266 GNL2Q13823 731 aaKnown RBP17.24■□□□□ 0.35
CCHCR1-201ENST00000376266 PAXIP1Q6ZW49 1069 aaPredicted RBP17.24■□□□□ 0.35
CCHCR1-201ENST00000376266 FBXO18Q8NFZ0 1043 aa17.24■□□□□ 0.35
CCHCR1-201ENST00000376266 GYS2P54840 703 aa17.24■□□□□ 0.35
CCHCR1-201ENST00000376266 PODNQ7Z5L7 613 aa17.24■□□□□ 0.35
CCHCR1-201ENST00000376266 CHD4Q14839 1912 aa17.24■□□□□ 0.35
CCHCR1-201ENST00000376266 SEMA3EO15041 775 aa17.23■□□□□ 0.35
CCHCR1-201ENST00000376266 GTF2IP78347 998 aa17.23■□□□□ 0.35
CCHCR1-201ENST00000376266 TRIM65Q6PJ69 517 aa17.23■□□□□ 0.35
CCHCR1-201ENST00000376266 VPS33BQ9H267 617 aa17.23■□□□□ 0.35
CCHCR1-201ENST00000376266 ARFGAP3Q9NP61 516 aa17.23■□□□□ 0.35
CCHCR1-201ENST00000376266 YDJCA8MPS7 323 aa17.23■□□□□ 0.35
CCHCR1-201ENST00000376266 SRLQ86TD4 932 aa17.23■□□□□ 0.35
CCHCR1-201ENST00000376266 REXO1L1PQ8IX06 675 aa17.23■□□□□ 0.35
CCHCR1-201ENST00000376266 ADAM21Q9UKJ8 722 aa17.23■□□□□ 0.35
CCHCR1-201ENST00000376266 RRP15Q9Y3B9 282 aaKnown RBP17.23■□□□□ 0.35
CCHCR1-201ENST00000376266 A0A0D9SFI3 127 aa17.22■□□□□ 0.35
CCHCR1-201ENST00000376266 CTR9Q6PD62 1173 aa17.22■□□□□ 0.35
CCHCR1-201ENST00000376266 GPR161Q8N6U8 529 aaKnown RBP17.22■□□□□ 0.35
CCHCR1-201ENST00000376266 EXOC4Q96A65 974 aa17.22■□□□□ 0.35
CCHCR1-201ENST00000376266 USP28Q96RU2 1077 aa17.22■□□□□ 0.35
CCHCR1-201ENST00000376266 PIH1D3Q9NQM4 214 aaKnown RBP17.22■□□□□ 0.35
CCHCR1-201ENST00000376266 NIM1KQ8IY84 436 aa17.22■□□□□ 0.35
CCHCR1-201ENST00000376266 JDP2Q8WYK2 163 aa17.22■□□□□ 0.35
CCHCR1-201ENST00000376266 ZNF396Q96N95 335 aaPredicted RBP17.22■□□□□ 0.35
CCHCR1-201ENST00000376266 ABCF2Q9UG63 623 aa17.22■□□□□ 0.35
CCHCR1-201ENST00000376266 GTF2A1P52655 376 aaPredicted RBP17.21■□□□□ 0.35
CCHCR1-201ENST00000376266 DPCR1Q3MIW9 517 aa17.21■□□□□ 0.35
CCHCR1-201ENST00000376266 TTLL5Q6EMB2 1281 aa17.21■□□□□ 0.35
CCHCR1-201ENST00000376266 FAM177A1Q8N128 213 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms