RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 CYB5R4Q7L1T6 521 aa27.01■■□□□ 1.91
HLA-C-202ENST00000376237 TTC14Q96N46 770 aa27.01■■□□□ 1.91
HLA-C-202ENST00000376237 ANTXR2P58335 489 aa27■■□□□ 1.91
HLA-C-202ENST00000376237 CERKLQ49MI3 558 aaPredicted RBP27■■□□□ 1.91
HLA-C-202ENST00000376237 CCDC178Q5BJE1 867 aa27■■□□□ 1.91
HLA-C-202ENST00000376237 ANP32AP39687 249 aaKnown RBP27■■□□□ 1.91
HLA-C-202ENST00000376237 MCM2P49736 904 aa27■■□□□ 1.91
HLA-C-202ENST00000376237 FGD1P98174 961 aa27■■□□□ 1.91
HLA-C-202ENST00000376237 COL9A3Q14050 684 aaPredicted RBP27■■□□□ 1.91
HLA-C-202ENST00000376237 USP48Q86UV5 1035 aa27■■□□□ 1.91
HLA-C-202ENST00000376237 NEDD1Q8NHV4 660 aa27■■□□□ 1.91
HLA-C-202ENST00000376237 UBAC1Q9BSL1 405 aa27■■□□□ 1.91
HLA-C-202ENST00000376237 TCP11L1Q9NUJ3 509 aa27■■□□□ 1.91
HLA-C-202ENST00000376237 SIPA1L1O43166 1804 aa26.99■■□□□ 1.91
HLA-C-202ENST00000376237 ERICH2A1L162 156 aa26.99■■□□□ 1.91
HLA-C-202ENST00000376237 FAM196BA6NMK8 535 aa26.99■■□□□ 1.91
HLA-C-202ENST00000376237 ADM5C9JUS6 153 aa26.99■■□□□ 1.91
HLA-C-202ENST00000376237 FAM47AQ5JRC9 791 aa26.99■■□□□ 1.91
HLA-C-202ENST00000376237 MIGA2Q7L4E1 593 aa26.99■■□□□ 1.91
HLA-C-202ENST00000376237 CHST3Q7LGC8 479 aa26.99■■□□□ 1.91
HLA-C-202ENST00000376237 AGXT2Q9BYV1 514 aa26.99■■□□□ 1.91
HLA-C-202ENST00000376237 GPBP1L1Q9HC44 474 aaPredicted RBP26.99■■□□□ 1.91
HLA-C-202ENST00000376237 POTEIP0CG38 1075 aa26.98■■□□□ 1.91
HLA-C-202ENST00000376237 POTEJP0CG39 1038 aa26.98■■□□□ 1.91
HLA-C-202ENST00000376237 PRAMEF18Q5VWM3 479 aa26.98■■□□□ 1.91
HLA-C-202ENST00000376237 NKX2-3Q8TAU0 364 aa26.98■■□□□ 1.91
HLA-C-202ENST00000376237 SNX21Q969T3 373 aa26.98■■□□□ 1.91
HLA-C-202ENST00000376237 IFIT3O14879 490 aaKnown RBP26.97■■□□□ 1.91
HLA-C-202ENST00000376237 SLURP2P0DP57 97 aa26.97■■□□□ 1.91
HLA-C-202ENST00000376237 NF2P35240 595 aa26.97■■□□□ 1.91
HLA-C-202ENST00000376237 Q6ZUG5 572 aa26.97■■□□□ 1.91
HLA-C-202ENST00000376237 TMTC2Q8N394 836 aa26.97■■□□□ 1.91
HLA-C-202ENST00000376237 TCEANC2Q96MN5 208 aa26.97■■□□□ 1.91
HLA-C-202ENST00000376237 ZSCAN10Q96SZ4 725 aaPredicted RBP26.97■■□□□ 1.91
HLA-C-202ENST00000376237 ZNF341Q9BYN7 854 aa26.97■■□□□ 1.91
HLA-C-202ENST00000376237 PLIN4Q96Q06 1357 aa26.96■■□□□ 1.91
HLA-C-202ENST00000376237 PPP4R3BQ5MIZ7 849 aa26.96■■□□□ 1.91
HLA-C-202ENST00000376237 IGDCC4Q8TDY8 1250 aa26.96■■□□□ 1.91
HLA-C-202ENST00000376237 GLIS2Q9BZE0 524 aaPredicted RBP26.96■■□□□ 1.91
HLA-C-202ENST00000376237 ANGEL1Q9UNK9 670 aaKnown RBP26.96■■□□□ 1.91
HLA-C-202ENST00000376237 AKR1B1P15121 316 aa26.95■■□□□ 1.91
HLA-C-202ENST00000376237 LIFRP42702 1097 aa26.95■■□□□ 1.91
HLA-C-202ENST00000376237 AK2P54819 239 aa26.95■■□□□ 1.91
HLA-C-202ENST00000376237 TMEM67Q5HYA8 995 aa26.95■■□□□ 1.91
HLA-C-202ENST00000376237 MAP1SQ66K74 1059 aaPredicted RBP26.95■■□□□ 1.91
HLA-C-202ENST00000376237 CDCA5Q96FF9 252 aa26.95■■□□□ 1.91
HLA-C-202ENST00000376237 CABP5Q9NP86 173 aa26.95■■□□□ 1.91
HLA-C-202ENST00000376237 GINM1Q9NU53 330 aa26.95■■□□□ 1.91
HLA-C-202ENST00000376237 PPP1R12BO60237 982 aaPredicted RBP26.95■■□□□ 1.9
HLA-C-202ENST00000376237 ABCB5Q2M3G0 1257 aa26.95■■□□□ 1.9
HLA-C-202ENST00000376237 TMEM179Q6ZVK1 233 aa26.95■■□□□ 1.9
HLA-C-202ENST00000376237 DGKHQ86XP1 1220 aa26.95■■□□□ 1.9
HLA-C-202ENST00000376237 LRRC2Q9BYS8 371 aa26.95■■□□□ 1.9
HLA-C-202ENST00000376237 TNKSO95271 1327 aa26.94■■□□□ 1.9
HLA-C-202ENST00000376237 POLR2AP24928 1970 aaKnown RBP26.94■■□□□ 1.9
HLA-C-202ENST00000376237 PHF20L1A8MW92 1017 aa26.94■■□□□ 1.9
HLA-C-202ENST00000376237 MPHOSPH10O00566 681 aaKnown RBP26.94■■□□□ 1.9
HLA-C-202ENST00000376237 SH2B2O14492 632 aaPredicted RBP26.94■■□□□ 1.9
HLA-C-202ENST00000376237 CAP2P40123 477 aa26.94■■□□□ 1.9
HLA-C-202ENST00000376237 ZKSCAN3Q9BRR0 538 aa26.94■■□□□ 1.9
HLA-C-202ENST00000376237 ZNF112Q9UJU3 913 aa26.94■■□□□ 1.9
HLA-C-202ENST00000376237 TOB2Q14106 344 aaPredicted RBP26.93■■□□□ 1.9
HLA-C-202ENST00000376237 WTAPQ15007 396 aa26.93■■□□□ 1.9
HLA-C-202ENST00000376237 IL17RBQ9NRM6 502 aa26.93■■□□□ 1.9
HLA-C-202ENST00000376237 CTNND1O60716 968 aaKnown RBP26.92■■□□□ 1.9
HLA-C-202ENST00000376237 SEC23AQ15436 765 aa26.92■■□□□ 1.9
HLA-C-202ENST00000376237 CHADLQ6NUI6 762 aa26.92■■□□□ 1.9
HLA-C-202ENST00000376237 SGMS1Q86VZ5 419 aa26.92■■□□□ 1.9
HLA-C-202ENST00000376237 ENAHQ8N8S7 591 aaPredicted RBP26.92■■□□□ 1.9
HLA-C-202ENST00000376237 ANKS1AQ92625 1134 aa26.92■■□□□ 1.9
HLA-C-202ENST00000376237 BRF1Q92994 677 aa26.92■■□□□ 1.9
HLA-C-202ENST00000376237 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.92■■□□□ 1.9
HLA-C-202ENST00000376237 IGKV6D-41A0A0C4DH26 115 aa26.91■■□□□ 1.9
HLA-C-202ENST00000376237 HSCBQ8IWL3 235 aa26.91■■□□□ 1.9
HLA-C-202ENST00000376237 KANSL2Q9H9L4 492 aa26.91■■□□□ 1.9
HLA-C-202ENST00000376237 LY9Q9HBG7 655 aa26.91■■□□□ 1.9
HLA-C-202ENST00000376237 LIMCH1Q9UPQ0 1083 aa26.91■■□□□ 1.9
HLA-C-202ENST00000376237 SSC5DA1L4H1 1573 aa26.91■■□□□ 1.9
HLA-C-202ENST00000376237 GDF11O95390 407 aa26.9■■□□□ 1.9
HLA-C-202ENST00000376237 ASNSP08243 561 aa26.9■■□□□ 1.9
HLA-C-202ENST00000376237 NOVP48745 357 aa26.9■■□□□ 1.9
HLA-C-202ENST00000376237 EVCP57679 992 aa26.9■■□□□ 1.9
HLA-C-202ENST00000376237 BECN1Q14457 450 aa26.9■■□□□ 1.9
HLA-C-202ENST00000376237 RRP1BQ14684 758 aaKnown RBP26.9■■□□□ 1.9
HLA-C-202ENST00000376237 IFIT1BQ5T764 474 aaKnown RBP26.9■■□□□ 1.9
HLA-C-202ENST00000376237 KLRG1Q96E93 195 aa26.9■■□□□ 1.9
HLA-C-202ENST00000376237 CEP95Q96GE4 821 aa26.9■■□□□ 1.9
HLA-C-202ENST00000376237 MTMR4Q9NYA4 1195 aa26.9■■□□□ 1.9
HLA-C-202ENST00000376237 CD2BP2O95400 341 aaKnown RBP26.9■■□□□ 1.9
HLA-C-202ENST00000376237 GH2P01242 217 aa26.9■■□□□ 1.9
HLA-C-202ENST00000376237 DLK2Q6UY11 383 aa26.9■■□□□ 1.9
HLA-C-202ENST00000376237 CCDC69A6NI79 296 aa26.89■■□□□ 1.89
HLA-C-202ENST00000376237 NMT2O60551 498 aa26.89■■□□□ 1.89
HLA-C-202ENST00000376237 USP2O75604 605 aaPredicted RBP26.89■■□□□ 1.89
HLA-C-202ENST00000376237 ZSCAN31Q96LW9 406 aaPredicted RBP26.89■■□□□ 1.89
HLA-C-202ENST00000376237 WRNIP1Q96S55 665 aa26.89■■□□□ 1.89
HLA-C-202ENST00000376237 ZBTB21Q9ULJ3 1066 aa26.89■■□□□ 1.89
HLA-C-202ENST00000376237 STX8Q9UNK0 236 aa26.89■■□□□ 1.89
HLA-C-202ENST00000376237 TTLL1O95922 423 aa26.88■■□□□ 1.89
HLA-C-202ENST00000376237 IREB2P48200 963 aaKnown RBP26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms