RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 TRMT44Q8IYL2 757 aaKnown RBP14.87□□□□□ -0.03
LSM2-208ENST00000375661 SOCS4Q8WXH5 440 aa14.87□□□□□ -0.03
LSM2-208ENST00000375661 DHX36Q9H2U1 1008 aaKnown RBP14.87□□□□□ -0.03
LSM2-208ENST00000375661 GINM1Q9NU53 330 aa14.87□□□□□ -0.03
LSM2-208ENST00000375661 PI4KBQ9UBF8 816 aa14.87□□□□□ -0.03
LSM2-208ENST00000375661 OGDHLQ9ULD0 1010 aa14.87□□□□□ -0.03
LSM2-208ENST00000375661 FAM196BA6NMK8 535 aa14.86□□□□□ -0.03
LSM2-208ENST00000375661 C19orf81C9J6K1 198 aa14.86□□□□□ -0.03
LSM2-208ENST00000375661 IGSF3O75054 1194 aa14.86□□□□□ -0.03
LSM2-208ENST00000375661 ASNSP08243 561 aa14.86□□□□□ -0.03
LSM2-208ENST00000375661 IRX3P78415 501 aaPredicted RBP14.86□□□□□ -0.03
LSM2-208ENST00000375661 LRIT3Q3SXY7 679 aa14.86□□□□□ -0.03
LSM2-208ENST00000375661 MAP3K21Q5TCX8 1036 aa14.86□□□□□ -0.03
LSM2-208ENST00000375661 C7orf61Q8IZ16 206 aa14.86□□□□□ -0.03
LSM2-208ENST00000375661 TRIB2Q92519 343 aa14.86□□□□□ -0.03
LSM2-208ENST00000375661 NEUROD6Q96NK8 337 aa14.86□□□□□ -0.03
LSM2-208ENST00000375661 C11orf49Q9H6J7 331 aa14.86□□□□□ -0.03
LSM2-208ENST00000375661 TMOD4Q9NZQ9 345 aa14.86□□□□□ -0.03
LSM2-208ENST00000375661 FRMPD3Q5JV73 1810 aa14.86□□□□□ -0.03
LSM2-208ENST00000375661 UQCRFS1P1P0C7P4 283 aa14.85□□□□□ -0.03
LSM2-208ENST00000375661 PLCG2P16885 1265 aa14.85□□□□□ -0.03
LSM2-208ENST00000375661 MNX1P50219 401 aaPredicted RBP14.85□□□□□ -0.03
LSM2-208ENST00000375661 BACE1P56817 501 aa14.85□□□□□ -0.03
LSM2-208ENST00000375661 GORABQ5T7V8 394 aa14.85□□□□□ -0.03
LSM2-208ENST00000375661 TEX11Q8IYF3 940 aa14.85□□□□□ -0.03
LSM2-208ENST00000375661 GTF3C2Q8WUA4 911 aaPredicted RBP14.85□□□□□ -0.03
LSM2-208ENST00000375661 NUDT12Q9BQG2 462 aa14.85□□□□□ -0.03
LSM2-208ENST00000375661 NOL10Q9BSC4 688 aaKnown RBP14.85□□□□□ -0.03
LSM2-208ENST00000375661 RAI14Q9P0K7 980 aa14.85□□□□□ -0.03
LSM2-208ENST00000375661 NOP58Q9Y2X3 529 aaKnown RBP14.85□□□□□ -0.03
LSM2-208ENST00000375661 SURF6O75683 361 aaKnown RBP14.84□□□□□ -0.03
LSM2-208ENST00000375661 BAG3O95817 575 aa14.84□□□□□ -0.03
LSM2-208ENST00000375661 TRIM32Q13049 653 aa14.84□□□□□ -0.03
LSM2-208ENST00000375661 AAMPQ13685 434 aa14.84□□□□□ -0.03
LSM2-208ENST00000375661 RRP1BQ14684 758 aaKnown RBP14.84□□□□□ -0.03
LSM2-208ENST00000375661 FOXP4Q8IVH2 680 aaPredicted RBP14.84□□□□□ -0.03
LSM2-208ENST00000375661 GPRC5AQ8NFJ5 357 aa14.84□□□□□ -0.03
LSM2-208ENST00000375661 LRP2BPQ9P2M1 347 aa14.84□□□□□ -0.03
LSM2-208ENST00000375661 ZMYND8Q9ULU4 1186 aaPredicted RBP14.84□□□□□ -0.03
LSM2-208ENST00000375661 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.84□□□□□ -0.03
LSM2-208ENST00000375661 MYO5AQ9Y4I1 1855 aaKnown RBP14.83□□□□□ -0.04
LSM2-208ENST00000375661 HMMRO75330 724 aa14.83□□□□□ -0.04
LSM2-208ENST00000375661 MAPK4P31152 587 aa14.83□□□□□ -0.04
LSM2-208ENST00000375661 G3BP1Q13283 466 aaKnown RBP eCLIP14.83□□□□□ -0.04
LSM2-208ENST00000375661 MTMR2Q13614 643 aa14.83□□□□□ -0.04
LSM2-208ENST00000375661 TBC1D9Q6ZT07 1266 aa14.83□□□□□ -0.04
LSM2-208ENST00000375661 METTL16Q86W50 562 aaKnown RBP14.83□□□□□ -0.04
LSM2-208ENST00000375661 TDHQ8IZJ6 230 aa14.83□□□□□ -0.04
LSM2-208ENST00000375661 MYH1P12882 1939 aa14.83□□□□□ -0.04
LSM2-208ENST00000375661 USP17L10C9JJH3 530 aa14.82□□□□□ -0.04
LSM2-208ENST00000375661 PRKAR2AP13861 404 aaKnown RBP14.82□□□□□ -0.04
LSM2-208ENST00000375661 CYP2B6P20813 491 aa14.82□□□□□ -0.04
LSM2-208ENST00000375661 MCAMP43121 646 aa14.82□□□□□ -0.04
LSM2-208ENST00000375661 PPP4CP60510 307 aa14.82□□□□□ -0.04
LSM2-208ENST00000375661 HERVK_113P62684 666 aa14.82□□□□□ -0.04
LSM2-208ENST00000375661 PI16Q6UXB8 463 aa14.82□□□□□ -0.04
LSM2-208ENST00000375661 DEFB123Q8N688 67 aa14.82□□□□□ -0.04
LSM2-208ENST00000375661 SH3RF3Q8TEJ3 882 aaPredicted RBP14.82□□□□□ -0.04
LSM2-208ENST00000375661 P2RX7Q99572 595 aaKnown RBP14.82□□□□□ -0.04
LSM2-208ENST00000375661 STXBP5LQ9Y2K9 1186 aa14.82□□□□□ -0.04
LSM2-208ENST00000375661 COL6A1P12109 1028 aa14.81□□□□□ -0.04
LSM2-208ENST00000375661 ZKSCAN1P17029 563 aaPredicted RBP14.81□□□□□ -0.04
LSM2-208ENST00000375661 RGS2P41220 211 aa14.81□□□□□ -0.04
LSM2-208ENST00000375661 MAGEA10P43363 369 aaPredicted RBP14.81□□□□□ -0.04
LSM2-208ENST00000375661 NAA16Q6N069 864 aaPredicted RBP14.81□□□□□ -0.04
LSM2-208ENST00000375661 USP6NLQ92738 828 aa14.81□□□□□ -0.04
LSM2-208ENST00000375661 TRIM34Q9BYJ4 488 aa14.81□□□□□ -0.04
LSM2-208ENST00000375661 TXNRD2Q9NNW7 524 aa14.81□□□□□ -0.04
LSM2-208ENST00000375661 EXOC6BQ9Y2D4 811 aa14.81□□□□□ -0.04
LSM2-208ENST00000375661 PFASO15067 1338 aa14.81□□□□□ -0.04
LSM2-208ENST00000375661 SYN1P17600 705 aa14.8□□□□□ -0.04
LSM2-208ENST00000375661 ERVK-9P63128 1117 aa14.8□□□□□ -0.04
LSM2-208ENST00000375661 ERVK-24P63145 666 aa14.8□□□□□ -0.04
LSM2-208ENST00000375661 CACNB2Q08289 660 aaPredicted RBP14.8□□□□□ -0.04
LSM2-208ENST00000375661 CRACR2BQ8N4Y2 399 aaPredicted RBP14.8□□□□□ -0.04
LSM2-208ENST00000375661 APBA2Q99767 749 aa14.8□□□□□ -0.04
LSM2-208ENST00000375661 UBE2OQ9C0C9 1292 aaKnown RBP14.8□□□□□ -0.04
LSM2-208ENST00000375661 DNAJC18Q9H819 358 aa14.8□□□□□ -0.04
LSM2-208ENST00000375661 GPR108Q9NPR9 543 aa14.8□□□□□ -0.04
LSM2-208ENST00000375661 AATFQ9NY61 560 aaKnown RBP eCLIP14.8□□□□□ -0.04
LSM2-208ENST00000375661 RBPJLQ9UBG7 517 aa14.8□□□□□ -0.04
LSM2-208ENST00000375661 FLT1P17948 1338 aa14.8□□□□□ -0.04
LSM2-208ENST00000375661 MORN1Q5T089 497 aa14.79□□□□□ -0.04
LSM2-208ENST00000375661 USP17L2Q6R6M4 530 aa14.79□□□□□ -0.04
LSM2-208ENST00000375661 GPR142Q7Z601 462 aa14.79□□□□□ -0.04
LSM2-208ENST00000375661 CCAR1Q8IX12 1150 aaKnown RBP14.79□□□□□ -0.04
LSM2-208ENST00000375661 TGFBRAP1Q8WUH2 860 aa14.79□□□□□ -0.04
LSM2-208ENST00000375661 DCTPP1Q9H773 170 aa14.79□□□□□ -0.04
LSM2-208ENST00000375661 ZBTB21Q9ULJ3 1066 aa14.79□□□□□ -0.04
LSM2-208ENST00000375661 COL6A3P12111 3177 aa14.79□□□□□ -0.04
LSM2-208ENST00000375661 LAMA3Q16787 3333 aa14.78□□□□□ -0.04
LSM2-208ENST00000375661 GLRX3O76003 335 aaKnown RBP14.78□□□□□ -0.04
LSM2-208ENST00000375661 HLA-DOAP06340 250 aa14.78□□□□□ -0.04
LSM2-208ENST00000375661 OS9Q13438 667 aaPredicted RBP14.78□□□□□ -0.04
LSM2-208ENST00000375661 HDAC1Q13547 482 aaPredicted RBP14.78□□□□□ -0.04
LSM2-208ENST00000375661 CCDC158Q5M9N0 1113 aa14.78□□□□□ -0.04
LSM2-208ENST00000375661 LHX8Q68G74 356 aa14.78□□□□□ -0.04
LSM2-208ENST00000375661 PLEKHH3Q7Z736 793 aa14.78□□□□□ -0.04
LSM2-208ENST00000375661 CERS3Q8IU89 383 aa14.78□□□□□ -0.04
LSM2-208ENST00000375661 MAPKAPK5Q8IW41 473 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms