RNA–Protein interactions for RNA: ENST00000374982.5

HLA-DRA-201, Transcript of major histocompatibility complex, class II, DR alpha, humanhuman

BASIC

Gene HLA-DRA, Length 1,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRA-201ENST00000374982 CAVIN4Q5BKX8 364 aa12.75□□□□□ -0.37
HLA-DRA-201ENST00000374982 ZSCAN29Q8IWY8 852 aaPredicted RBP12.75□□□□□ -0.37
HLA-DRA-201ENST00000374982 CCAR1Q8IX12 1150 aaKnown RBP12.75□□□□□ -0.37
HLA-DRA-201ENST00000374982 ZNF280CQ8ND82 737 aa12.75□□□□□ -0.37
HLA-DRA-201ENST00000374982 EDC3Q96F86 508 aaKnown RBP12.75□□□□□ -0.37
HLA-DRA-201ENST00000374982 FBXL18Q96ME1 805 aa12.75□□□□□ -0.37
HLA-DRA-201ENST00000374982 PUS3Q9BZE2 481 aaKnown RBP12.75□□□□□ -0.37
HLA-DRA-201ENST00000374982 RFX7Q2KHR2 1363 aa12.74□□□□□ -0.37
HLA-DRA-201ENST00000374982 CYBAP13498 195 aa12.74□□□□□ -0.37
HLA-DRA-201ENST00000374982 CYP2C19P33261 490 aa12.74□□□□□ -0.37
HLA-DRA-201ENST00000374982 HERVK_113P62684 666 aa12.74□□□□□ -0.37
HLA-DRA-201ENST00000374982 ERVK-9P63128 1117 aa12.74□□□□□ -0.37
HLA-DRA-201ENST00000374982 ERVK-24P63145 666 aa12.74□□□□□ -0.37
HLA-DRA-201ENST00000374982 TRIM26Q12899 539 aaPredicted RBP12.74□□□□□ -0.37
HLA-DRA-201ENST00000374982 SH3D19Q5HYK7 790 aa12.74□□□□□ -0.37
HLA-DRA-201ENST00000374982 ANO1Q5XXA6 986 aa12.74□□□□□ -0.37
HLA-DRA-201ENST00000374982 G2E3Q7L622 706 aa12.74□□□□□ -0.37
HLA-DRA-201ENST00000374982 NKX2-4Q9H2Z4 354 aa12.74□□□□□ -0.37
HLA-DRA-201ENST00000374982 RBPJLQ9UBG7 517 aa12.74□□□□□ -0.37
HLA-DRA-201ENST00000374982 CHD9Q3L8U1 2897 aa12.74□□□□□ -0.37
HLA-DRA-201ENST00000374982 A0A0G2JMZ2 1700 aa12.74□□□□□ -0.37
HLA-DRA-201ENST00000374982 ENTPD3O75355 529 aa12.73□□□□□ -0.37
HLA-DRA-201ENST00000374982 EPHA10Q5JZY3 1008 aa12.73□□□□□ -0.37
HLA-DRA-201ENST00000374982 RASIP1Q5U651 963 aa12.73□□□□□ -0.37
HLA-DRA-201ENST00000374982 HERVK_113Q902F9 699 aa12.73□□□□□ -0.37
HLA-DRA-201ENST00000374982 UIMC1Q96RL1 719 aa12.73□□□□□ -0.37
HLA-DRA-201ENST00000374982 PAGR1Q9BTK6 254 aa12.73□□□□□ -0.37
HLA-DRA-201ENST00000374982 CWC22Q9HCG8 908 aaKnown RBP12.73□□□□□ -0.37
HLA-DRA-201ENST00000374982 CD320Q9NPF0 282 aa12.73□□□□□ -0.37
HLA-DRA-201ENST00000374982 NDUFB9Q9Y6M9 179 aa12.73□□□□□ -0.37
HLA-DRA-201ENST00000374982 FAM196BA6NMK8 535 aa12.72□□□□□ -0.37
HLA-DRA-201ENST00000374982 ATP2B2Q01814 1243 aa12.72□□□□□ -0.37
HLA-DRA-201ENST00000374982 RAB30Q15771 203 aa12.72□□□□□ -0.37
HLA-DRA-201ENST00000374982 LINS1Q8NG48 757 aa12.72□□□□□ -0.37
HLA-DRA-201ENST00000374982 IDI2Q9BXS1 227 aa12.72□□□□□ -0.37
HLA-DRA-201ENST00000374982 TMEM39AQ9NV64 488 aa12.72□□□□□ -0.37
HLA-DRA-201ENST00000374982 MSRAQ9UJ68 235 aa12.72□□□□□ -0.37
HLA-DRA-201ENST00000374982 PQBP1O60828 265 aaKnown RBP12.71□□□□□ -0.37
HLA-DRA-201ENST00000374982 PRDX5P30044 214 aa12.71□□□□□ -0.37
HLA-DRA-201ENST00000374982 HOXA7P31268 230 aaPredicted RBP12.71□□□□□ -0.37
HLA-DRA-201ENST00000374982 FOXK2Q01167 660 aa12.71□□□□□ -0.37
HLA-DRA-201ENST00000374982 LRRC41Q15345 812 aa12.71□□□□□ -0.37
HLA-DRA-201ENST00000374982 TMEM240Q5SV17 173 aa12.71□□□□□ -0.37
HLA-DRA-201ENST00000374982 C16orf59Q7L2K0 433 aa12.71□□□□□ -0.37
HLA-DRA-201ENST00000374982 TSPYL6Q8N831 410 aa12.71□□□□□ -0.37
HLA-DRA-201ENST00000374982 NPLOC4Q8TAT6 608 aa12.71□□□□□ -0.37
HLA-DRA-201ENST00000374982 TBC1D2Q9BYX2 928 aa12.71□□□□□ -0.37
HLA-DRA-201ENST00000374982 OSBPL5Q9H0X9 879 aaPredicted RBP12.71□□□□□ -0.37
HLA-DRA-201ENST00000374982 KCNH6Q9H252 994 aa12.71□□□□□ -0.37
HLA-DRA-201ENST00000374982 SLC28A3Q9HAS3 691 aa12.71□□□□□ -0.37
HLA-DRA-201ENST00000374982 YBX2Q9Y2T7 364 aaKnown RBP12.71□□□□□ -0.37
HLA-DRA-201ENST00000374982 MROH5Q6ZUA9 1318 aa12.7□□□□□ -0.38
HLA-DRA-201ENST00000374982 ZEB1P37275 1124 aaPredicted RBP12.7□□□□□ -0.38
HLA-DRA-201ENST00000374982 MTMR2Q13614 643 aa12.7□□□□□ -0.38
HLA-DRA-201ENST00000374982 SLC44A5Q8NCS7 719 aa12.7□□□□□ -0.38
HLA-DRA-201ENST00000374982 DNAAF4Q8WXU2 420 aa12.7□□□□□ -0.38
HLA-DRA-201ENST00000374982 PHOX2BQ99453 314 aa12.7□□□□□ -0.38
HLA-DRA-201ENST00000374982 STK31Q9BXU1 1019 aa12.7□□□□□ -0.38
HLA-DRA-201ENST00000374982 CHMP4AQ9BY43 222 aa12.7□□□□□ -0.38
HLA-DRA-201ENST00000374982 DDX4Q9NQI0 724 aaKnown RBP12.7□□□□□ -0.38
HLA-DRA-201ENST00000374982 IFT57Q9NWB7 429 aa12.7□□□□□ -0.38
HLA-DRA-201ENST00000374982 COG5Q9UP83 839 aa12.7□□□□□ -0.38
HLA-DRA-201ENST00000374982 CHD7Q9P2D1 2997 aa12.69□□□□□ -0.38
HLA-DRA-201ENST00000374982 ZNF236Q9UL36 1845 aa12.69□□□□□ -0.38
HLA-DRA-201ENST00000374982 SLC15A5A6NIM6 579 aa12.69□□□□□ -0.38
HLA-DRA-201ENST00000374982 USP17L5A8MUK1 530 aa12.69□□□□□ -0.38
HLA-DRA-201ENST00000374982 IGHA2P01877 340 aa12.69□□□□□ -0.38
HLA-DRA-201ENST00000374982 HOXC6P09630 235 aa12.69□□□□□ -0.38
HLA-DRA-201ENST00000374982 FAAP100Q0VG06 881 aa12.69□□□□□ -0.38
HLA-DRA-201ENST00000374982 WDR66Q8TBY9 1149 aa12.69□□□□□ -0.38
HLA-DRA-201ENST00000374982 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.69□□□□□ -0.38
HLA-DRA-201ENST00000374982 PHF24Q9UPV7 400 aa12.69□□□□□ -0.38
HLA-DRA-201ENST00000374982 PRRC2BQ5JSZ5 2229 aaKnown RBP12.69□□□□□ -0.38
HLA-DRA-201ENST00000374982 SEPT4O43236 478 aa12.68□□□□□ -0.38
HLA-DRA-201ENST00000374982 ST18O60284 1047 aa12.68□□□□□ -0.38
HLA-DRA-201ENST00000374982 TBC1D12O60347 775 aa12.68□□□□□ -0.38
HLA-DRA-201ENST00000374982 GLRX3O76003 335 aaKnown RBP12.68□□□□□ -0.38
HLA-DRA-201ENST00000374982 TIMP1P01033 207 aa12.68□□□□□ -0.38
HLA-DRA-201ENST00000374982 PTPREP23469 700 aa12.68□□□□□ -0.38
HLA-DRA-201ENST00000374982 GNAI1P63096 354 aa12.68□□□□□ -0.38
HLA-DRA-201ENST00000374982 C1QBPQ07021 282 aaKnown RBP12.68□□□□□ -0.38
HLA-DRA-201ENST00000374982 PPIGQ13427 754 aaKnown RBP eCLIP12.68□□□□□ -0.38
HLA-DRA-201ENST00000374982 PICALMQ13492 652 aa12.68□□□□□ -0.38
HLA-DRA-201ENST00000374982 FAM47AQ5JRC9 791 aa12.68□□□□□ -0.38
HLA-DRA-201ENST00000374982 WDR78Q5VTH9 848 aa12.68□□□□□ -0.38
HLA-DRA-201ENST00000374982 RUNDC1Q96C34 613 aa12.68□□□□□ -0.38
HLA-DRA-201ENST00000374982 AS3MTQ9HBK9 375 aa12.68□□□□□ -0.38
HLA-DRA-201ENST00000374982 TMOD4Q9NZQ9 345 aa12.68□□□□□ -0.38
HLA-DRA-201ENST00000374982 CAP2P40123 477 aa12.67□□□□□ -0.38
HLA-DRA-201ENST00000374982 BACE1P56817 501 aa12.67□□□□□ -0.38
HLA-DRA-201ENST00000374982 GRB14Q14449 540 aa12.67□□□□□ -0.38
HLA-DRA-201ENST00000374982 RRP1BQ14684 758 aaKnown RBP12.67□□□□□ -0.38
HLA-DRA-201ENST00000374982 CSPP1Q1MSJ5 1256 aa12.67□□□□□ -0.38
HLA-DRA-201ENST00000374982 CCDC174Q6PII3 467 aa12.67□□□□□ -0.38
HLA-DRA-201ENST00000374982 ZNF365Q70YC5 407 aa12.67□□□□□ -0.38
HLA-DRA-201ENST00000374982 VGLL2Q8N8G2 317 aa12.67□□□□□ -0.38
HLA-DRA-201ENST00000374982 GTF3C2Q8WUA4 911 aaPredicted RBP12.67□□□□□ -0.38
HLA-DRA-201ENST00000374982 MTCH2Q9Y6C9 303 aa12.67□□□□□ -0.38
HLA-DRA-201ENST00000374982 SMCHD1A6NHR9 2005 aa12.67□□□□□ -0.38
HLA-DRA-201ENST00000374982 CNMDO75829 334 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms