RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 MYL5Q02045 173 aa19.57■□□□□ 0.72
RXRB-201ENST00000374680 WASF1Q92558 559 aa19.57■□□□□ 0.72
RXRB-201ENST00000374680 C8orf37Q96NL8 207 aa19.57■□□□□ 0.72
RXRB-201ENST00000374680 ATRNO75882 1429 aa19.57■□□□□ 0.72
RXRB-201ENST00000374680 FMR1Q06787 632 aaKnown RBP eCLIP19.57■□□□□ 0.72
RXRB-201ENST00000374680 ZSCAN10Q96SZ4 725 aaPredicted RBP19.57■□□□□ 0.72
RXRB-201ENST00000374680 ADAMTS3O15072 1205 aa19.56■□□□□ 0.72
RXRB-201ENST00000374680 RIOK1Q9BRS2 568 aaKnown RBP19.56■□□□□ 0.72
RXRB-201ENST00000374680 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.56■□□□□ 0.72
RXRB-201ENST00000374680 FBXO2Q9UK22 296 aaPredicted RBP19.56■□□□□ 0.72
RXRB-201ENST00000374680 CDC25AP30304 524 aa19.56■□□□□ 0.72
RXRB-201ENST00000374680 NBPF5PQ86XG9 351 aaPredicted RBP19.56■□□□□ 0.72
RXRB-201ENST00000374680 TUBE1Q9UJT0 475 aa19.56■□□□□ 0.72
RXRB-201ENST00000374680 PNPLA7Q6ZV29 1317 aa19.55■□□□□ 0.72
RXRB-201ENST00000374680 CCDC196A0A1B0GTZ2 297 aa19.55■□□□□ 0.72
RXRB-201ENST00000374680 MECOMQ03112 1051 aa19.55■□□□□ 0.72
RXRB-201ENST00000374680 POSTNQ15063 836 aa19.55■□□□□ 0.72
RXRB-201ENST00000374680 CATIPQ7Z7H3 387 aa19.55■□□□□ 0.72
RXRB-201ENST00000374680 MAN1B1Q9UKM7 699 aa19.55■□□□□ 0.72
RXRB-201ENST00000374680 ABCA3Q99758 1704 aa19.55■□□□□ 0.72
RXRB-201ENST00000374680 CTR9Q6PD62 1173 aa19.55■□□□□ 0.72
RXRB-201ENST00000374680 AMIGO3Q86WK7 504 aa19.55■□□□□ 0.72
RXRB-201ENST00000374680 SAMSN1Q9NSI8 373 aaKnown RBP19.55■□□□□ 0.72
RXRB-201ENST00000374680 MYH14Q7Z406 1995 aaKnown RBP19.55■□□□□ 0.72
RXRB-201ENST00000374680 MYH15Q9Y2K3 1946 aa19.55■□□□□ 0.72
RXRB-201ENST00000374680 GNPATO15228 680 aa19.55■□□□□ 0.72
RXRB-201ENST00000374680 GSDMDP57764 484 aa19.55■□□□□ 0.72
RXRB-201ENST00000374680 RPS8P62241 208 aaKnown RBP19.55■□□□□ 0.72
RXRB-201ENST00000374680 CPLX3Q8WVH0 158 aa19.55■□□□□ 0.72
RXRB-201ENST00000374680 AK7Q96M32 723 aa19.55■□□□□ 0.72
RXRB-201ENST00000374680 CCDC94Q9BW85 323 aaPredicted RBP19.55■□□□□ 0.72
RXRB-201ENST00000374680 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.55■□□□□ 0.72
RXRB-201ENST00000374680 NFE2L3Q9Y4A8 694 aa19.55■□□□□ 0.72
RXRB-201ENST00000374680 MYH3P11055 1940 aa19.54■□□□□ 0.72
RXRB-201ENST00000374680 NEMFO60524 1076 aa19.54■□□□□ 0.72
RXRB-201ENST00000374680 ADKP55263 362 aaKnown RBP19.54■□□□□ 0.72
RXRB-201ENST00000374680 SEC23AQ15436 765 aa19.54■□□□□ 0.72
RXRB-201ENST00000374680 IQCA1Q86XH1 822 aa19.54■□□□□ 0.72
RXRB-201ENST00000374680 A0A087X0B3 334 aa19.54■□□□□ 0.72
RXRB-201ENST00000374680 TOP1P11387 765 aaKnown RBP19.54■□□□□ 0.72
RXRB-201ENST00000374680 PTPREP23469 700 aa19.54■□□□□ 0.72
RXRB-201ENST00000374680 RILPL1Q5EBL4 403 aa19.54■□□□□ 0.72
RXRB-201ENST00000374680 LRRN4CLQ8ND94 238 aa19.54■□□□□ 0.72
RXRB-201ENST00000374680 SMARCE1Q969G3 411 aa19.54■□□□□ 0.72
RXRB-201ENST00000374680 EP400Q96L91 3159 aa19.54■□□□□ 0.72
RXRB-201ENST00000374680 VWA3AA6NCI4 1184 aa19.53■□□□□ 0.72
RXRB-201ENST00000374680 USP17L8P0C7I0 530 aa19.53■□□□□ 0.72
RXRB-201ENST00000374680 PKN1Q16512 942 aa19.53■□□□□ 0.72
RXRB-201ENST00000374680 TMTC2Q8N394 836 aa19.53■□□□□ 0.72
RXRB-201ENST00000374680 NGLY1Q96IV0 654 aa19.53■□□□□ 0.72
RXRB-201ENST00000374680 PPP1R13BQ96KQ4 1090 aa19.53■□□□□ 0.72
RXRB-201ENST00000374680 TIGD1Q96MW7 591 aa19.53■□□□□ 0.72
RXRB-201ENST00000374680 SETDB2Q96T68 719 aa19.53■□□□□ 0.72
RXRB-201ENST00000374680 OSBPL5Q9H0X9 879 aaPredicted RBP19.53■□□□□ 0.72
RXRB-201ENST00000374680 BSDC1Q9NW68 430 aaPredicted RBP19.53■□□□□ 0.72
RXRB-201ENST00000374680 PAXBP1Q9Y5B6 917 aa19.53■□□□□ 0.72
RXRB-201ENST00000374680 MTERF4Q7Z6M4 381 aaKnown RBP19.52■□□□□ 0.72
RXRB-201ENST00000374680 DYNLL2Q96FJ2 89 aa19.52■□□□□ 0.72
RXRB-201ENST00000374680 NLRP3Q96P20 1036 aa19.52■□□□□ 0.72
RXRB-201ENST00000374680 BLZF1Q9H2G9 400 aa19.52■□□□□ 0.72
RXRB-201ENST00000374680 MCM9Q9NXL9 1143 aa19.52■□□□□ 0.72
RXRB-201ENST00000374680 TRIM75PA6NK02 468 aa19.52■□□□□ 0.72
RXRB-201ENST00000374680 NYAP1Q6ZVC0 841 aa19.52■□□□□ 0.72
RXRB-201ENST00000374680 KIF18AQ8NI77 898 aa19.52■□□□□ 0.72
RXRB-201ENST00000374680 RASGRP4Q8TDF6 673 aa19.52■□□□□ 0.72
RXRB-201ENST00000374680 FOXP1Q9H334 677 aaPredicted RBP19.52■□□□□ 0.72
RXRB-201ENST00000374680 COL1A1P02452 1464 aaPredicted RBP19.52■□□□□ 0.72
RXRB-201ENST00000374680 TSPY2A6NKD2 308 aa19.52■□□□□ 0.71
RXRB-201ENST00000374680 CTIFO43310 598 aaKnown RBP19.52■□□□□ 0.71
RXRB-201ENST00000374680 HIBADHP31937 336 aaKnown RBP19.52■□□□□ 0.71
RXRB-201ENST00000374680 UBE4AQ14139 1066 aa19.52■□□□□ 0.71
RXRB-201ENST00000374680 BPIFA3Q9BQP9 254 aa19.52■□□□□ 0.71
RXRB-201ENST00000374680 DNAI1Q9UI46 699 aa19.52■□□□□ 0.71
RXRB-201ENST00000374680 MCM7P33993 719 aa19.51■□□□□ 0.71
RXRB-201ENST00000374680 PIK3AP1Q6ZUJ8 805 aa19.51■□□□□ 0.71
RXRB-201ENST00000374680 SRBD1Q8N5C6 995 aaKnown RBP19.51■□□□□ 0.71
RXRB-201ENST00000374680 ANKIB1Q9P2G1 1089 aa19.51■□□□□ 0.71
RXRB-201ENST00000374680 MAPK8IP1Q9UQF2 711 aa19.51■□□□□ 0.71
RXRB-201ENST00000374680 ZPR1O75312 459 aa19.51■□□□□ 0.71
RXRB-201ENST00000374680 MDM2Q00987 491 aaPredicted RBP19.51■□□□□ 0.71
RXRB-201ENST00000374680 DIXDC1Q155Q3 683 aa19.51■□□□□ 0.71
RXRB-201ENST00000374680 ELF2Q15723 593 aa19.51■□□□□ 0.71
RXRB-201ENST00000374680 GPKOWQ92917 476 aaPredicted RBP eCLIP19.51■□□□□ 0.71
RXRB-201ENST00000374680 ZBTB9Q96C00 473 aa19.51■□□□□ 0.71
RXRB-201ENST00000374680 NSUN4Q96CB9 384 aaKnown RBP19.51■□□□□ 0.71
RXRB-201ENST00000374680 PLIN2Q99541 437 aa19.51■□□□□ 0.71
RXRB-201ENST00000374680 CPVLQ9H3G5 476 aa19.51■□□□□ 0.71
RXRB-201ENST00000374680 STK36Q9NRP7 1315 aa19.5■□□□□ 0.71
RXRB-201ENST00000374680 SYMPKQ92797 1274 aaKnown RBP19.5■□□□□ 0.71
RXRB-201ENST00000374680 INTS13Q9NVM9 706 aa19.5■□□□□ 0.71
RXRB-201ENST00000374680 C4AP0C0L4 1744 aa19.5■□□□□ 0.71
RXRB-201ENST00000374680 C4BP0C0L5 1744 aa19.5■□□□□ 0.71
RXRB-201ENST00000374680 IKBKBO14920 756 aa19.5■□□□□ 0.71
RXRB-201ENST00000374680 KRT2P35908 639 aa19.5■□□□□ 0.71
RXRB-201ENST00000374680 NLRP5P59047 1200 aa19.5■□□□□ 0.71
RXRB-201ENST00000374680 MYH2Q9UKX2 1941 aa19.49■□□□□ 0.71
RXRB-201ENST00000374680 XBP1P17861 261 aa19.49■□□□□ 0.71
RXRB-201ENST00000374680 TROAPQ12815 778 aa19.49■□□□□ 0.71
RXRB-201ENST00000374680 MED15Q96RN5 788 aa19.49■□□□□ 0.71
RXRB-201ENST00000374680 DCP1AQ9NPI6 582 aaPredicted RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms