RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 CRACR2BQ8N4Y2 399 aaPredicted RBP18.27■□□□□ 0.52
HDAC8-209ENST00000373589 SPATA32Q96LK8 384 aa18.27■□□□□ 0.52
HDAC8-209ENST00000373589 AIFM3Q96NN9 605 aa18.27■□□□□ 0.52
HDAC8-209ENST00000373589 SLC26A6Q9BXS9 759 aa18.27■□□□□ 0.52
HDAC8-209ENST00000373589 MKNK2Q9HBH9 465 aa18.27■□□□□ 0.52
HDAC8-209ENST00000373589 GJB4Q9NTQ9 266 aa18.27■□□□□ 0.52
HDAC8-209ENST00000373589 CFAP45Q9UL16 551 aa18.27■□□□□ 0.52
HDAC8-209ENST00000373589 ZNF646O15015 1829 aaPredicted RBP18.27■□□□□ 0.52
HDAC8-209ENST00000373589 FOCADQ5VW36 1801 aa18.27■□□□□ 0.52
HDAC8-209ENST00000373589 KIF13BQ9NQT8 1826 aa18.27■□□□□ 0.52
HDAC8-209ENST00000373589 SCN9AQ15858 1988 aa18.27■□□□□ 0.51
HDAC8-209ENST00000373589 SCNN1DP51172 638 aa18.26■□□□□ 0.51
HDAC8-209ENST00000373589 APOBEC3HQ6NTF7 200 aaKnown RBP18.26■□□□□ 0.51
HDAC8-209ENST00000373589 ANKS1AQ92625 1134 aa18.26■□□□□ 0.51
HDAC8-209ENST00000373589 TEKT1Q969V4 418 aa18.26■□□□□ 0.51
HDAC8-209ENST00000373589 ZNF287Q9HBT7 754 aa18.26■□□□□ 0.51
HDAC8-209ENST00000373589 IL17RBQ9NRM6 502 aa18.26■□□□□ 0.51
HDAC8-209ENST00000373589 TCP11L1Q9NUJ3 509 aa18.26■□□□□ 0.51
HDAC8-209ENST00000373589 USP17L3A6NCW0 530 aa18.26■□□□□ 0.51
HDAC8-209ENST00000373589 USP17L4A6NCW7 530 aa18.26■□□□□ 0.51
HDAC8-209ENST00000373589 WDHD1O75717 1129 aaPredicted RBP18.26■□□□□ 0.51
HDAC8-209ENST00000373589 RASA1P20936 1047 aa18.26■□□□□ 0.51
HDAC8-209ENST00000373589 CCDC93Q567U6 631 aa18.26■□□□□ 0.51
HDAC8-209ENST00000373589 USP17L1Q7RTZ2 530 aa18.26■□□□□ 0.51
HDAC8-209ENST00000373589 DGKHQ86XP1 1220 aa18.26■□□□□ 0.51
HDAC8-209ENST00000373589 RTKN2Q8IZC4 609 aa18.26■□□□□ 0.51
HDAC8-209ENST00000373589 SLC44A5Q8NCS7 719 aa18.26■□□□□ 0.51
HDAC8-209ENST00000373589 WASF1Q92558 559 aa18.26■□□□□ 0.51
HDAC8-209ENST00000373589 UBE2Q2LH0YL09 131 aa18.25■□□□□ 0.51
HDAC8-209ENST00000373589 HDLBPQ00341 1268 aaKnown RBP18.25■□□□□ 0.51
HDAC8-209ENST00000373589 KIF23Q02241 960 aaPredicted RBP18.25■□□□□ 0.51
HDAC8-209ENST00000373589 FUT2Q10981 343 aa18.25■□□□□ 0.51
HDAC8-209ENST00000373589 CCDC178Q5BJE1 867 aa18.25■□□□□ 0.51
HDAC8-209ENST00000373589 L1TD1Q5T7N2 865 aaKnown RBP18.25■□□□□ 0.51
HDAC8-209ENST00000373589 KRT40Q6A162 431 aa18.25■□□□□ 0.51
HDAC8-209ENST00000373589 TRIM22Q8IYM9 498 aa18.25■□□□□ 0.51
HDAC8-209ENST00000373589 SYAP1Q96A49 352 aaPredicted RBP18.25■□□□□ 0.51
HDAC8-209ENST00000373589 ZDHHC15Q96MV8 337 aa18.25■□□□□ 0.51
HDAC8-209ENST00000373589 PSMD1Q99460 953 aa18.25■□□□□ 0.51
HDAC8-209ENST00000373589 RBM28Q9NW13 759 aaKnown RBP18.25■□□□□ 0.51
HDAC8-209ENST00000373589 MYH15Q9Y2K3 1946 aa18.25■□□□□ 0.51
HDAC8-209ENST00000373589 CRKP46108 304 aa18.24■□□□□ 0.51
HDAC8-209ENST00000373589 CDK8P49336 464 aa18.24■□□□□ 0.51
HDAC8-209ENST00000373589 CDC42EP5Q6NZY7 148 aa18.24■□□□□ 0.51
HDAC8-209ENST00000373589 BRAPQ7Z569 592 aa18.24■□□□□ 0.51
HDAC8-209ENST00000373589 ZNF444Q8N0Y2 327 aaPredicted RBP18.24■□□□□ 0.51
HDAC8-209ENST00000373589 ZNF396Q96N95 335 aaPredicted RBP18.24■□□□□ 0.51
HDAC8-209ENST00000373589 DDX4Q9NQI0 724 aaKnown RBP18.24■□□□□ 0.51
HDAC8-209ENST00000373589 USP40Q9NVE5 1235 aa18.24■□□□□ 0.51
HDAC8-209ENST00000373589 RCOR1Q9UKL0 485 aa18.24■□□□□ 0.51
HDAC8-209ENST00000373589 ECM29Q5VYK3 1845 aa18.24■□□□□ 0.51
HDAC8-209ENST00000373589 KIF28PB7ZC32 967 aa18.23■□□□□ 0.51
HDAC8-209ENST00000373589 PPIP5K2O43314 1243 aa18.23■□□□□ 0.51
HDAC8-209ENST00000373589 DEXIO95424 95 aa18.23■□□□□ 0.51
HDAC8-209ENST00000373589 GUCY1A2P33402 732 aa18.23■□□□□ 0.51
HDAC8-209ENST00000373589 CMTR1Q8N1G2 835 aaKnown RBP18.23■□□□□ 0.51
HDAC8-209ENST00000373589 USP28Q96RU2 1077 aa18.23■□□□□ 0.51
HDAC8-209ENST00000373589 RNF26Q9BY78 433 aaPredicted RBP18.23■□□□□ 0.51
HDAC8-209ENST00000373589 MYH1P12882 1939 aa18.23■□□□□ 0.51
HDAC8-209ENST00000373589 YDJCA8MPS7 323 aa18.23■□□□□ 0.51
HDAC8-209ENST00000373589 ZBTB7AO95365 584 aa18.23■□□□□ 0.51
HDAC8-209ENST00000373589 TSPY3P0CV98 308 aa18.23■□□□□ 0.51
HDAC8-209ENST00000373589 TSPY8P0CW00 308 aa18.23■□□□□ 0.51
HDAC8-209ENST00000373589 KIAA0825Q8IV33 1275 aa18.23■□□□□ 0.51
HDAC8-209ENST00000373589 ADAMTSL1Q8N6G6 1762 aa18.22■□□□□ 0.51
HDAC8-209ENST00000373589 TGFB2P61812 414 aa18.22■□□□□ 0.51
HDAC8-209ENST00000373589 GABPAQ06546 454 aa18.22■□□□□ 0.51
HDAC8-209ENST00000373589 PICALMQ13492 652 aa18.22■□□□□ 0.51
HDAC8-209ENST00000373589 TMTC3Q6ZXV5 915 aa18.22■□□□□ 0.51
HDAC8-209ENST00000373589 CCDC82Q8N4S0 544 aa18.22■□□□□ 0.51
HDAC8-209ENST00000373589 PGBD1Q96JS3 809 aa18.22■□□□□ 0.51
HDAC8-209ENST00000373589 FTOQ9C0B1 505 aaKnown RBP eCLIP18.22■□□□□ 0.51
HDAC8-209ENST00000373589 MTFR1LQ9H019 292 aa18.22■□□□□ 0.51
HDAC8-209ENST00000373589 PLEKHA8P1O95397 391 aa18.21■□□□□ 0.51
HDAC8-209ENST00000373589 U2AF2P26368 475 aaKnown RBP eCLIP18.21■□□□□ 0.51
HDAC8-209ENST00000373589 MRE11P49959 708 aa18.21■□□□□ 0.51
HDAC8-209ENST00000373589 TRIM29Q14134 588 aa18.21■□□□□ 0.51
HDAC8-209ENST00000373589 CCDC183Q5T5S1 534 aa18.21■□□□□ 0.51
HDAC8-209ENST00000373589 MYSM1Q5VVJ2 828 aa18.21■□□□□ 0.51
HDAC8-209ENST00000373589 NEDD1Q8NHV4 660 aa18.21■□□□□ 0.51
HDAC8-209ENST00000373589 MAP3K14Q99558 947 aa18.21■□□□□ 0.51
HDAC8-209ENST00000373589 OSBPL5Q9H0X9 879 aaPredicted RBP18.21■□□□□ 0.51
HDAC8-209ENST00000373589 RTEL1Q9NZ71 1219 aa18.21■□□□□ 0.51
HDAC8-209ENST00000373589 SERPINA10Q9UK55 444 aa18.21■□□□□ 0.51
HDAC8-209ENST00000373589 SYCE3A1L190 88 aa18.2■□□□□ 0.5
HDAC8-209ENST00000373589 PRPF3O43395 683 aaKnown RBP18.2■□□□□ 0.5
HDAC8-209ENST00000373589 LRSAM1Q6UWE0 723 aa18.2■□□□□ 0.5
HDAC8-209ENST00000373589 CTCFLQ8NI51 663 aaPredicted RBP18.2■□□□□ 0.5
HDAC8-209ENST00000373589 KAT14Q9H8E8 782 aa18.2■□□□□ 0.5
HDAC8-209ENST00000373589 GRPEL1Q9HAV7 217 aa18.2■□□□□ 0.5
HDAC8-209ENST00000373589 XRCC6P12956 609 aaKnown RBP eCLIP18.2■□□□□ 0.5
HDAC8-209ENST00000373589 NOVP48745 357 aa18.2■□□□□ 0.5
HDAC8-209ENST00000373589 CEBPZQ03701 1054 aaKnown RBP18.2■□□□□ 0.5
HDAC8-209ENST00000373589 PKN1Q16512 942 aa18.2■□□□□ 0.5
HDAC8-209ENST00000373589 VPS33BQ9H267 617 aa18.2■□□□□ 0.5
HDAC8-209ENST00000373589 ATF5Q9Y2D1 282 aaPredicted RBP18.2■□□□□ 0.5
HDAC8-209ENST00000373589 MMP1P03956 469 aa18.19■□□□□ 0.5
HDAC8-209ENST00000373589 POLD1P28340 1107 aa18.19■□□□□ 0.5
HDAC8-209ENST00000373589 NFIAQ12857 509 aa18.19■□□□□ 0.5
HDAC8-209ENST00000373589 TPRNQ4KMQ1 711 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms