RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 FUT2Q10981 343 aa22.7■■□□□ 1.22
HDAC1-201ENST00000373548 GNL2Q13823 731 aaKnown RBP22.7■■□□□ 1.22
HDAC1-201ENST00000373548 CCDC73Q6ZRK6 1079 aa22.7■■□□□ 1.22
HDAC1-201ENST00000373548 FSIP1Q8NA03 581 aa22.7■■□□□ 1.22
HDAC1-201ENST00000373548 DDX60LQ5H9U9 1706 aaKnown RBP22.69■■□□□ 1.22
HDAC1-201ENST00000373548 DDAH1O94760 285 aa22.69■■□□□ 1.22
HDAC1-201ENST00000373548 MMP1P03956 469 aa22.69■■□□□ 1.22
HDAC1-201ENST00000373548 ALDH1B1P30837 517 aa22.69■■□□□ 1.22
HDAC1-201ENST00000373548 TYRO3Q06418 890 aa22.69■■□□□ 1.22
HDAC1-201ENST00000373548 SF3A1Q15459 793 aaKnown RBP22.69■■□□□ 1.22
HDAC1-201ENST00000373548 CERS3Q8IU89 383 aa22.69■■□□□ 1.22
HDAC1-201ENST00000373548 DYNLL2Q96FJ2 89 aa22.69■■□□□ 1.22
HDAC1-201ENST00000373548 RNF26Q9BY78 433 aaPredicted RBP22.69■■□□□ 1.22
HDAC1-201ENST00000373548 A0A1W2PQ27 194 aa22.69■■□□□ 1.22
HDAC1-201ENST00000373548 A0A1W2PQ64 194 aa22.69■■□□□ 1.22
HDAC1-201ENST00000373548 A0A1W2PQD8 194 aa22.69■■□□□ 1.22
HDAC1-201ENST00000373548 TSPY2A6NKD2 308 aa22.69■■□□□ 1.22
HDAC1-201ENST00000373548 CALM1P0DP23 149 aa22.69■■□□□ 1.22
HDAC1-201ENST00000373548 CALM2P0DP24 149 aa22.69■■□□□ 1.22
HDAC1-201ENST00000373548 CALM3P0DP25 149 aa22.69■■□□□ 1.22
HDAC1-201ENST00000373548 FAM160A1Q05DH4 1040 aa22.69■■□□□ 1.22
HDAC1-201ENST00000373548 MPNDQ8N594 471 aa22.69■■□□□ 1.22
HDAC1-201ENST00000373548 FAM163AQ96GL9 167 aaPredicted RBP22.69■■□□□ 1.22
HDAC1-201ENST00000373548 COA1Q9GZY4 146 aa22.69■■□□□ 1.22
HDAC1-201ENST00000373548 MRVI1Q9Y6F6 885 aa22.69■■□□□ 1.22
HDAC1-201ENST00000373548 GTF2IP78347 998 aa22.68■■□□□ 1.22
HDAC1-201ENST00000373548 MAPKAPK5Q8IW41 473 aa22.68■■□□□ 1.22
HDAC1-201ENST00000373548 MRPS27Q92552 414 aaKnown RBP22.68■■□□□ 1.22
HDAC1-201ENST00000373548 MASTLQ96GX5 879 aa22.68■■□□□ 1.22
HDAC1-201ENST00000373548 RRAGDQ9NQL2 400 aaPredicted RBP22.68■■□□□ 1.22
HDAC1-201ENST00000373548 RBM28Q9NW13 759 aaKnown RBP22.68■■□□□ 1.22
HDAC1-201ENST00000373548 KCNJ14Q9UNX9 436 aa22.68■■□□□ 1.22
HDAC1-201ENST00000373548 GAKO14976 1311 aa22.68■■□□□ 1.22
HDAC1-201ENST00000373548 PLEKHA8P1O95397 391 aa22.67■■□□□ 1.22
HDAC1-201ENST00000373548 SLC39A14Q15043 492 aa22.67■■□□□ 1.22
HDAC1-201ENST00000373548 RCSD1Q6JBY9 416 aa22.67■■□□□ 1.22
HDAC1-201ENST00000373548 POTEAQ6S8J7 498 aa22.67■■□□□ 1.22
HDAC1-201ENST00000373548 AMOTL1Q8IY63 956 aa22.67■■□□□ 1.22
HDAC1-201ENST00000373548 BTBD18B2RXH4 712 aa22.66■■□□□ 1.22
HDAC1-201ENST00000373548 RHBDL3P58872 404 aa22.66■■□□□ 1.22
HDAC1-201ENST00000373548 DIS3L2Q8IYB7 885 aaKnown RBP22.66■■□□□ 1.22
HDAC1-201ENST00000373548 SAP30BPQ9UHR5 308 aaKnown RBP22.66■■□□□ 1.22
HDAC1-201ENST00000373548 FOCADQ5VW36 1801 aa22.66■■□□□ 1.22
HDAC1-201ENST00000373548 NT5C2P49902 561 aa22.66■■□□□ 1.22
HDAC1-201ENST00000373548 PLCD1P51178 756 aa22.66■■□□□ 1.22
HDAC1-201ENST00000373548 TFAP4Q01664 338 aa22.66■■□□□ 1.22
HDAC1-201ENST00000373548 SAFBQ15424 915 aaKnown RBP eCLIP22.66■■□□□ 1.22
HDAC1-201ENST00000373548 PKN1Q16512 942 aa22.66■■□□□ 1.22
HDAC1-201ENST00000373548 DPP8Q6V1X1 898 aaPredicted RBP22.66■■□□□ 1.22
HDAC1-201ENST00000373548 NOSTRINQ8IVI9 506 aa22.66■■□□□ 1.22
HDAC1-201ENST00000373548 SLF2Q8IX21 1173 aa22.66■■□□□ 1.22
HDAC1-201ENST00000373548 TEX11Q8IYF3 940 aa22.66■■□□□ 1.22
HDAC1-201ENST00000373548 MAP3K14Q99558 947 aa22.66■■□□□ 1.22
HDAC1-201ENST00000373548 ZC3H12CQ9C0D7 883 aaKnown RBP22.66■■□□□ 1.22
HDAC1-201ENST00000373548 MYH1P12882 1939 aa22.66■■□□□ 1.22
HDAC1-201ENST00000373548 PRPF3O43395 683 aaKnown RBP22.65■■□□□ 1.22
HDAC1-201ENST00000373548 PLCG2P16885 1265 aa22.65■■□□□ 1.22
HDAC1-201ENST00000373548 PTPAQ15257 358 aa22.65■■□□□ 1.22
HDAC1-201ENST00000373548 AXDND1Q5T1B0 1012 aaPredicted RBP22.65■■□□□ 1.22
HDAC1-201ENST00000373548 TMTC3Q6ZXV5 915 aa22.65■■□□□ 1.22
HDAC1-201ENST00000373548 FMR1NBQ8N0W7 255 aaPredicted RBP22.65■■□□□ 1.22
HDAC1-201ENST00000373548 ANO8Q9HCE9 1232 aaPredicted RBP22.65■■□□□ 1.22
HDAC1-201ENST00000373548 IL17RBQ9NRM6 502 aa22.65■■□□□ 1.22
HDAC1-201ENST00000373548 CTAGE5O15320 804 aa22.64■■□□□ 1.22
HDAC1-201ENST00000373548 KINO60870 393 aaKnown RBP22.64■■□□□ 1.22
HDAC1-201ENST00000373548 AKAP17AQ02040 695 aaKnown RBP22.64■■□□□ 1.22
HDAC1-201ENST00000373548 SHISA4Q96DD7 197 aa22.64■■□□□ 1.22
HDAC1-201ENST00000373548 FOXP1Q9H334 677 aaPredicted RBP22.64■■□□□ 1.22
HDAC1-201ENST00000373548 QSER1Q2KHR3 1735 aa22.64■■□□□ 1.21
HDAC1-201ENST00000373548 A0A1B0GVL5 298 aa22.64■■□□□ 1.21
HDAC1-201ENST00000373548 SLC44A5Q8NCS7 719 aa22.64■■□□□ 1.21
HDAC1-201ENST00000373548 MKNK2Q9HBH9 465 aa22.64■■□□□ 1.21
HDAC1-201ENST00000373548 USP25Q9UHP3 1055 aa22.64■■□□□ 1.21
HDAC1-201ENST00000373548 FLT1P17948 1338 aa22.63■■□□□ 1.21
HDAC1-201ENST00000373548 WDHD1O75717 1129 aaPredicted RBP22.63■■□□□ 1.21
HDAC1-201ENST00000373548 NDUFA8P51970 172 aa22.63■■□□□ 1.21
HDAC1-201ENST00000373548 CTCFLQ8NI51 663 aaPredicted RBP22.63■■□□□ 1.21
HDAC1-201ENST00000373548 FAM200AQ8TCP9 573 aa22.63■■□□□ 1.21
HDAC1-201ENST00000373548 DAGLAQ9Y4D2 1042 aa22.63■■□□□ 1.21
HDAC1-201ENST00000373548 V9GY48 417 aaPredicted RBP22.63■■□□□ 1.21
HDAC1-201ENST00000373548 CNTNAP5Q8WYK1 1306 aa22.63■■□□□ 1.21
HDAC1-201ENST00000373548 ESPNB1AK53 854 aa22.63■■□□□ 1.21
HDAC1-201ENST00000373548 MARCKSP29966 332 aaPredicted RBP22.63■■□□□ 1.21
HDAC1-201ENST00000373548 SASS6Q6UVJ0 657 aa22.63■■□□□ 1.21
HDAC1-201ENST00000373548 CERS5Q8N5B7 392 aa22.63■■□□□ 1.21
HDAC1-201ENST00000373548 ZNF622Q969S3 477 aaKnown RBP eCLIP22.63■■□□□ 1.218e-8■□□□□ 9.2
HDAC1-201ENST00000373548 hCG_1642624A0A1W2PR95 340 aa22.62■■□□□ 1.21
HDAC1-201ENST00000373548 PPP6R2O75170 966 aa22.62■■□□□ 1.21
HDAC1-201ENST00000373548 DOK7Q18PE1 504 aa22.62■■□□□ 1.21
HDAC1-201ENST00000373548 ANO6Q4KMQ2 910 aa22.62■■□□□ 1.21
HDAC1-201ENST00000373548 DGKHQ86XP1 1220 aa22.62■■□□□ 1.21
HDAC1-201ENST00000373548 C2CD5Q86YS7 1000 aa22.62■■□□□ 1.21
HDAC1-201ENST00000373548 ANKS1AQ92625 1134 aa22.62■■□□□ 1.21
HDAC1-201ENST00000373548 SUGT1Q9Y2Z0 365 aa22.62■■□□□ 1.21
HDAC1-201ENST00000373548 NR5A1Q13285 461 aa22.61■■□□□ 1.21
HDAC1-201ENST00000373548 SRBD1Q8N5C6 995 aaKnown RBP22.61■■□□□ 1.21
HDAC1-201ENST00000373548 OXER1Q8TDS5 423 aa22.61■■□□□ 1.21
HDAC1-201ENST00000373548 FBXW7Q969H0 707 aa22.61■■□□□ 1.21
HDAC1-201ENST00000373548 VPS54Q9P1Q0 977 aa22.61■■□□□ 1.21
HDAC1-201ENST00000373548 BAZ2BQ9UIF8 2168 aaKnown RBP22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms