RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 TXNDC2Q86VQ3 553 aa11.95□□□□□ -0.5
TRERF1-203ENST00000372917 C8orf58Q8NAV2 365 aa11.95□□□□□ -0.5
TRERF1-203ENST00000372917 NACA2Q9H009 215 aa11.95□□□□□ -0.5
TRERF1-203ENST00000372917 INCENPQ9NQS7 918 aa11.95□□□□□ -0.5
TRERF1-203ENST00000372917 E7EVH7 732 aa11.94□□□□□ -0.5
TRERF1-203ENST00000372917 MECOMQ03112 1051 aa11.94□□□□□ -0.5
TRERF1-203ENST00000372917 KRT24Q2M2I5 525 aa11.94□□□□□ -0.5
TRERF1-203ENST00000372917 CEP85Q6P2H3 762 aa11.94□□□□□ -0.5
TRERF1-203ENST00000372917 CCDC170Q8IYT3 715 aa11.94□□□□□ -0.5
TRERF1-203ENST00000372917 WHAMMQ8TF30 809 aa11.94□□□□□ -0.5
TRERF1-203ENST00000372917 GALNT8Q9NY28 637 aa11.94□□□□□ -0.5
TRERF1-203ENST00000372917 RASSF10A6NK89 507 aa11.94□□□□□ -0.5
TRERF1-203ENST00000372917 PFDN1O60925 122 aa11.94□□□□□ -0.5
TRERF1-203ENST00000372917 PDE1AP54750 535 aa11.94□□□□□ -0.5
TRERF1-203ENST00000372917 TUBB4BP68371 445 aa11.94□□□□□ -0.5
TRERF1-203ENST00000372917 PIP4K2BP78356 416 aa11.94□□□□□ -0.5
TRERF1-203ENST00000372917 GUCY1A3Q02108 690 aa11.94□□□□□ -0.5
TRERF1-203ENST00000372917 BRAPQ7Z569 592 aa11.94□□□□□ -0.5
TRERF1-203ENST00000372917 FCHSD1Q86WN1 690 aa11.94□□□□□ -0.5
TRERF1-203ENST00000372917 PHACTR3Q96KR7 559 aa11.94□□□□□ -0.5
TRERF1-203ENST00000372917 ZNF570Q96NI8 536 aa11.94□□□□□ -0.5
TRERF1-203ENST00000372917 FANCLQ9NW38 375 aa11.94□□□□□ -0.5
TRERF1-203ENST00000372917 NUB1Q9Y5A7 615 aa11.94□□□□□ -0.5
TRERF1-203ENST00000372917 U3KPZ7 1027 aaPredicted RBP11.94□□□□□ -0.5
TRERF1-203ENST00000372917 FANCAO15360 1455 aa11.94□□□□□ -0.5
TRERF1-203ENST00000372917 NUGGCQ68CJ6 796 aa11.94□□□□□ -0.5
TRERF1-203ENST00000372917 NME9Q86XW9 330 aa11.94□□□□□ -0.5
TRERF1-203ENST00000372917 NOP53Q9NZM5 478 aaKnown RBP11.94□□□□□ -0.5
TRERF1-203ENST00000372917 PFKFB2O60825 505 aa11.93□□□□□ -0.5
TRERF1-203ENST00000372917 ATP1A3P13637 1013 aa11.93□□□□□ -0.5
TRERF1-203ENST00000372917 SLC7A5Q01650 507 aa11.93□□□□□ -0.5
TRERF1-203ENST00000372917 MAEAQ7L5Y9 396 aa11.93□□□□□ -0.5
TRERF1-203ENST00000372917 TTC21AQ8NDW8 1320 aa11.93□□□□□ -0.5
TRERF1-203ENST00000372917 hCG_2014768A0A024R1R8 64 aa11.93□□□□□ -0.5
TRERF1-203ENST00000372917 CYP27B1O15528 508 aa11.93□□□□□ -0.5
TRERF1-203ENST00000372917 MBD4O95243 580 aa11.93□□□□□ -0.5
TRERF1-203ENST00000372917 FOSBP53539 338 aa11.93□□□□□ -0.5
TRERF1-203ENST00000372917 ADKP55263 362 aaKnown RBP11.93□□□□□ -0.5
TRERF1-203ENST00000372917 HSP90AA4PQ58FG1 418 aa11.93□□□□□ -0.5
TRERF1-203ENST00000372917 FKBP15Q5T1M5 1219 aa11.93□□□□□ -0.5
TRERF1-203ENST00000372917 SEPT14Q6ZU15 432 aa11.93□□□□□ -0.5
TRERF1-203ENST00000372917 SH2D3CQ8N5H7 860 aa11.93□□□□□ -0.5
TRERF1-203ENST00000372917 PPANQ9NQ55 473 aaKnown RBP11.93□□□□□ -0.5
TRERF1-203ENST00000372917 NRXN1Q9ULB1 1477 aa11.93□□□□□ -0.5
TRERF1-203ENST00000372917 SMAPO00193 183 aa11.93□□□□□ -0.5
TRERF1-203ENST00000372917 MTX1Q13505 466 aa11.93□□□□□ -0.5
TRERF1-203ENST00000372917 BLMHQ13867 455 aa11.93□□□□□ -0.5
TRERF1-203ENST00000372917 DPCR1Q3MIW9 517 aa11.93□□□□□ -0.5
TRERF1-203ENST00000372917 NCAPH2Q6IBW4 605 aa11.93□□□□□ -0.5
TRERF1-203ENST00000372917 CCT8L2Q96SF2 557 aa11.93□□□□□ -0.5
TRERF1-203ENST00000372917 SELENOOQ9BVL4 669 aa11.93□□□□□ -0.5
TRERF1-203ENST00000372917 UBAP1Q9NZ09 502 aa11.93□□□□□ -0.5
TRERF1-203ENST00000372917 DPPA5A6NC42 116 aa11.92□□□□□ -0.5
TRERF1-203ENST00000372917 PDCP20941 246 aa11.92□□□□□ -0.5
TRERF1-203ENST00000372917 G3BP1Q13283 466 aaKnown RBP eCLIP11.92□□□□□ -0.5
TRERF1-203ENST00000372917 IDI1Q13907 227 aa11.92□□□□□ -0.5
TRERF1-203ENST00000372917 TRAIPQ9BWF2 469 aa11.92□□□□□ -0.5
TRERF1-203ENST00000372917 PREBQ9HCU5 417 aa11.92□□□□□ -0.5
TRERF1-203ENST00000372917 BZW2Q9Y6E2 419 aaKnown RBP11.92□□□□□ -0.5
TRERF1-203ENST00000372917 GOLGA8KD6RF30 607 aa11.92□□□□□ -0.5
TRERF1-203ENST00000372917 AGPSO00116 658 aa11.92□□□□□ -0.5
TRERF1-203ENST00000372917 DNM1LO00429 736 aa11.92□□□□□ -0.5
TRERF1-203ENST00000372917 E2F6O75461 281 aa11.92□□□□□ -0.5
TRERF1-203ENST00000372917 MCM3P25205 808 aa11.92□□□□□ -0.5
TRERF1-203ENST00000372917 LSP1P33241 339 aa11.92□□□□□ -0.5
TRERF1-203ENST00000372917 NEXNQ0ZGT2 675 aa11.92□□□□□ -0.5
TRERF1-203ENST00000372917 DRP2Q13474 957 aa11.92□□□□□ -0.5
TRERF1-203ENST00000372917 SLMAPQ14BN4 828 aa11.92□□□□□ -0.5
TRERF1-203ENST00000372917 CDC5LQ99459 802 aaKnown RBP11.92□□□□□ -0.5
TRERF1-203ENST00000372917 EPN3Q9H201 632 aa11.92□□□□□ -0.5
TRERF1-203ENST00000372917 DNAJC5Q9H3Z4 198 aa11.92□□□□□ -0.5
TRERF1-203ENST00000372917 MRPL44Q9H9J2 332 aaKnown RBP11.92□□□□□ -0.5
TRERF1-203ENST00000372917 LRRC10BA6NIK2 292 aa11.92□□□□□ -0.5
TRERF1-203ENST00000372917 CCDC175P0C221 793 aa11.92□□□□□ -0.5
TRERF1-203ENST00000372917 ZNF280DQ6N043 979 aa11.92□□□□□ -0.5
TRERF1-203ENST00000372917 SND1Q7KZF4 910 aaKnown RBP eCLIP11.92□□□□□ -0.5
TRERF1-203ENST00000372917 EXOC8Q8IYI6 725 aa11.92□□□□□ -0.5
TRERF1-203ENST00000372917 CTNNBL1Q8WYA6 563 aaPredicted RBP11.92□□□□□ -0.5
TRERF1-203ENST00000372917 DTNBP1Q96EV8 351 aa11.92□□□□□ -0.5
TRERF1-203ENST00000372917 ZNHIT6Q9NWK9 470 aaKnown RBP11.92□□□□□ -0.5
TRERF1-203ENST00000372917 TBC1D7Q9P0N9 293 aa11.92□□□□□ -0.5
TRERF1-203ENST00000372917 N4BP3O15049 544 aa11.92□□□□□ -0.5
TRERF1-203ENST00000372917 LUC7L3O95232 432 aaKnown RBP11.92□□□□□ -0.5
TRERF1-203ENST00000372917 CCDC92Q53HC0 331 aaPredicted RBP11.92□□□□□ -0.5
TRERF1-203ENST00000372917 NLRP14Q86W24 1093 aa11.92□□□□□ -0.5
TRERF1-203ENST00000372917 EBF2Q9HAK2 575 aa11.92□□□□□ -0.5
TRERF1-203ENST00000372917 NLRP2Q9NX02 1062 aa11.92□□□□□ -0.5
TRERF1-203ENST00000372917 CBFA2T2O43439 604 aa11.91□□□□□ -0.5
TRERF1-203ENST00000372917 GNAI2P04899 355 aa11.91□□□□□ -0.5
TRERF1-203ENST00000372917 DEUP1Q05D60 604 aa11.91□□□□□ -0.5
TRERF1-203ENST00000372917 SPTY2D1Q68D10 685 aaPredicted RBP11.91□□□□□ -0.5
TRERF1-203ENST00000372917 ATL3Q6DD88 541 aa11.91□□□□□ -0.5
TRERF1-203ENST00000372917 DPF2Q92785 391 aa11.91□□□□□ -0.5
TRERF1-203ENST00000372917 SEC62Q99442 399 aaKnown RBP11.91□□□□□ -0.5
TRERF1-203ENST00000372917 SNX14Q9Y5W7 946 aa11.91□□□□□ -0.5
TRERF1-203ENST00000372917 EFCAB6Q5THR3 1501 aa11.91□□□□□ -0.5
TRERF1-203ENST00000372917 SPDYE5A6NIY4 337 aa11.91□□□□□ -0.5
TRERF1-203ENST00000372917 H3BQV1 296 aa11.91□□□□□ -0.5
TRERF1-203ENST00000372917 SCTRP47872 440 aa11.91□□□□□ -0.5
TRERF1-203ENST00000372917 CUL4BQ13620 913 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms