RNA–Protein interactions for RNA: ENST00000372873.8

SYNPO2L-201, Transcript of synaptopodin 2 like, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2L, Length 4,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2L-201ENST00000372873 GOLGA8AA7E2F4 631 aa12.54□□□□□ -0.4
SYNPO2L-201ENST00000372873 EPHB4P54760 987 aa12.54□□□□□ -0.4
SYNPO2L-201ENST00000372873 SLC7A5Q01650 507 aa12.54□□□□□ -0.4
SYNPO2L-201ENST00000372873 SAMSN1Q9NSI8 373 aaKnown RBP12.54□□□□□ -0.4
SYNPO2L-201ENST00000372873 FAM53CQ9NYF3 392 aa12.54□□□□□ -0.4
SYNPO2L-201ENST00000372873 SBNO1A3KN83 1393 aa12.54□□□□□ -0.4
SYNPO2L-201ENST00000372873 PIK3R4Q99570 1358 aa12.54□□□□□ -0.4
SYNPO2L-201ENST00000372873 ABCA6Q8N139 1617 aa12.54□□□□□ -0.4
SYNPO2L-201ENST00000372873 CAND2O75155 1236 aa12.54□□□□□ -0.4
SYNPO2L-201ENST00000372873 KRT71Q3SY84 523 aa12.54□□□□□ -0.4
SYNPO2L-201ENST00000372873 RBM43Q6ZSC3 357 aaKnown RBP12.54□□□□□ -0.4
SYNPO2L-201ENST00000372873 SSH3Q8TE77 659 aa12.54□□□□□ -0.4
SYNPO2L-201ENST00000372873 USP44Q9H0E7 712 aa12.54□□□□□ -0.4
SYNPO2L-201ENST00000372873 MRPL44Q9H9J2 332 aaKnown RBP12.54□□□□□ -0.4
SYNPO2L-201ENST00000372873 BATF3Q9NR55 127 aa12.54□□□□□ -0.4
SYNPO2L-201ENST00000372873 NOP53Q9NZM5 478 aaKnown RBP12.54□□□□□ -0.4
SYNPO2L-201ENST00000372873 HPCAL4Q9UM19 191 aa12.54□□□□□ -0.4
SYNPO2L-201ENST00000372873 MAPK8IP1Q9UQF2 711 aa12.54□□□□□ -0.4
SYNPO2L-201ENST00000372873 ARHGAP31Q2M1Z3 1444 aa12.54□□□□□ -0.4
SYNPO2L-201ENST00000372873 NBPF7P0C2Y1 421 aaPredicted RBP12.54□□□□□ -0.4
SYNPO2L-201ENST00000372873 GPTP24298 496 aa12.54□□□□□ -0.4
SYNPO2L-201ENST00000372873 USP14P54578 494 aa12.54□□□□□ -0.4
SYNPO2L-201ENST00000372873 GUCY1A3Q02108 690 aa12.54□□□□□ -0.4
SYNPO2L-201ENST00000372873 SSRP1Q08945 709 aaKnown RBP12.54□□□□□ -0.4
SYNPO2L-201ENST00000372873 TRIM14Q14142 442 aa12.54□□□□□ -0.4
SYNPO2L-201ENST00000372873 TSNAXIP1Q2TAA8 658 aa12.54□□□□□ -0.4
SYNPO2L-201ENST00000372873 PLEKHO1Q53GL0 409 aaPredicted RBP12.54□□□□□ -0.4
SYNPO2L-201ENST00000372873 TMED8Q6PL24 325 aaPredicted RBP12.54□□□□□ -0.4
SYNPO2L-201ENST00000372873 CLIC6Q96NY7 704 aa12.54□□□□□ -0.4
SYNPO2L-201ENST00000372873 SLC40A1Q9NP59 571 aa12.54□□□□□ -0.4
SYNPO2L-201ENST00000372873 TNRQ92752 1358 aa12.54□□□□□ -0.4
SYNPO2L-201ENST00000372873 RXRAP19793 462 aa12.53□□□□□ -0.4
SYNPO2L-201ENST00000372873 NBPF20Q3BBV1 942 aa12.53□□□□□ -0.4
SYNPO2L-201ENST00000372873 ZNF530Q6P9A1 599 aaPredicted RBP12.53□□□□□ -0.4
SYNPO2L-201ENST00000372873 SLC30A9Q6PML9 568 aa12.53□□□□□ -0.4
SYNPO2L-201ENST00000372873 ARHGEF25Q86VW2 580 aa12.53□□□□□ -0.4
SYNPO2L-201ENST00000372873 OR8K1Q8NGG5 319 aa12.53□□□□□ -0.4
SYNPO2L-201ENST00000372873 BPIFA3Q9BQP9 254 aa12.53□□□□□ -0.4
SYNPO2L-201ENST00000372873 PHAXQ9H814 394 aaKnown RBP12.53□□□□□ -0.4
SYNPO2L-201ENST00000372873 HAUS2Q9NVX0 235 aa12.53□□□□□ -0.4
SYNPO2L-201ENST00000372873 PRC1O43663 620 aa12.53□□□□□ -0.4
SYNPO2L-201ENST00000372873 RPS6KA5O75582 802 aa12.53□□□□□ -0.4
SYNPO2L-201ENST00000372873 GBP1P32455 592 aa12.53□□□□□ -0.4
SYNPO2L-201ENST00000372873 CTNNA1P35221 906 aaKnown RBP12.53□□□□□ -0.4
SYNPO2L-201ENST00000372873 UBE4AQ14139 1066 aa12.53□□□□□ -0.4
SYNPO2L-201ENST00000372873 TAF11Q15544 211 aa12.53□□□□□ -0.4
SYNPO2L-201ENST00000372873 NBPF6Q5VWK0 638 aa12.53□□□□□ -0.4
SYNPO2L-201ENST00000372873 NBPF5PQ86XG9 351 aaPredicted RBP12.53□□□□□ -0.4
SYNPO2L-201ENST00000372873 SH2D3CQ8N5H7 860 aa12.53□□□□□ -0.4
SYNPO2L-201ENST00000372873 NSUN7Q8NE18 718 aaKnown RBP12.53□□□□□ -0.4
SYNPO2L-201ENST00000372873 NCOA7Q8NI08 942 aa12.53□□□□□ -0.4
SYNPO2L-201ENST00000372873 NBPF4Q96M43 638 aa12.53□□□□□ -0.4
SYNPO2L-201ENST00000372873 PANX2Q96RD6 677 aa12.53□□□□□ -0.4
SYNPO2L-201ENST00000372873 NBPF3Q9H094 633 aa12.53□□□□□ -0.4
SYNPO2L-201ENST00000372873 G3BP2Q9UN86 482 aaKnown RBP12.53□□□□□ -0.4
SYNPO2L-201ENST00000372873 CTNND2Q9UQB3 1225 aa12.53□□□□□ -0.4
SYNPO2L-201ENST00000372873 TNNC1P63316 161 aa12.52□□□□□ -0.4
SYNPO2L-201ENST00000372873 TRAF1Q13077 416 aa12.52□□□□□ -0.4
SYNPO2L-201ENST00000372873 PRPF4BQ13523 1007 aaKnown RBP12.52□□□□□ -0.4
SYNPO2L-201ENST00000372873 MTHFSDQ2M296 383 aaKnown RBP12.52□□□□□ -0.4
SYNPO2L-201ENST00000372873 ALS2CLQ60I27 953 aa12.52□□□□□ -0.4
SYNPO2L-201ENST00000372873 ZKSCAN4Q969J2 545 aaPredicted RBP12.52□□□□□ -0.4
SYNPO2L-201ENST00000372873 LRRC45Q96CN5 670 aa12.52□□□□□ -0.4
SYNPO2L-201ENST00000372873 IL17RAQ96F46 866 aa12.52□□□□□ -0.4
SYNPO2L-201ENST00000372873 EDC3Q96F86 508 aaKnown RBP12.52□□□□□ -0.4
SYNPO2L-201ENST00000372873 ANKZF1Q9H8Y5 726 aa12.52□□□□□ -0.4
SYNPO2L-201ENST00000372873 NLRP2Q9NX02 1062 aa12.52□□□□□ -0.4
SYNPO2L-201ENST00000372873 NLRP14Q86W24 1093 aa12.52□□□□□ -0.4
SYNPO2L-201ENST00000372873 KLHL7Q8IXQ5 586 aa12.52□□□□□ -0.4
SYNPO2L-201ENST00000372873 WDR66Q8TBY9 1149 aa12.52□□□□□ -0.4
SYNPO2L-201ENST00000372873 VIRMAQ69YN4 1812 aaKnown RBP12.52□□□□□ -0.41
SYNPO2L-201ENST00000372873 IFIT1P09914 478 aaKnown RBP12.52□□□□□ -0.41
SYNPO2L-201ENST00000372873 GUCY2DQ02846 1103 aa12.52□□□□□ -0.41
SYNPO2L-201ENST00000372873 GPIHBP1Q8IV16 184 aa12.52□□□□□ -0.41
SYNPO2L-201ENST00000372873 CCDC155Q8N6L0 562 aa12.52□□□□□ -0.41
SYNPO2L-201ENST00000372873 HDAC6Q9UBN7 1215 aa12.52□□□□□ -0.41
SYNPO2L-201ENST00000372873 SERTAD1Q9UHV2 236 aa12.52□□□□□ -0.41
SYNPO2L-201ENST00000372873 SLC12A7Q9Y666 1083 aa12.52□□□□□ -0.41
SYNPO2L-201ENST00000372873 ABCC3O15438 1527 aa12.52□□□□□ -0.41
SYNPO2L-201ENST00000372873 CCDC160A6NGH7 325 aa12.52□□□□□ -0.41
SYNPO2L-201ENST00000372873 APBA1Q02410 837 aa12.52□□□□□ -0.41
SYNPO2L-201ENST00000372873 RASIP1Q5U651 963 aa12.52□□□□□ -0.41
SYNPO2L-201ENST00000372873 RNF168Q8IYW5 571 aaPredicted RBP12.52□□□□□ -0.41
SYNPO2L-201ENST00000372873 RNF10Q8N5U6 811 aaKnown RBP12.52□□□□□ -0.41
SYNPO2L-201ENST00000372873 CCDC197Q8NCU1 140 aa12.52□□□□□ -0.41
SYNPO2L-201ENST00000372873 TBC1D22AQ8WUA7 517 aa12.52□□□□□ -0.41
SYNPO2L-201ENST00000372873 MAP3K2Q9Y2U5 619 aa12.52□□□□□ -0.41
SYNPO2L-201ENST00000372873 NDUFB9Q9Y6M9 179 aa12.52□□□□□ -0.41
SYNPO2L-201ENST00000372873 ZFYVE9O95405 1425 aa12.51□□□□□ -0.41
SYNPO2L-201ENST00000372873 CETN3O15182 167 aa12.51□□□□□ -0.41
SYNPO2L-201ENST00000372873 SEPT7Q16181 437 aaKnown RBP12.51□□□□□ -0.41
SYNPO2L-201ENST00000372873 FAM133BQ5BKY9 247 aaKnown RBP12.51□□□□□ -0.41
SYNPO2L-201ENST00000372873 CCDC13Q8IYE1 715 aa12.51□□□□□ -0.41
SYNPO2L-201ENST00000372873 PI4K2BQ8TCG2 481 aa12.51□□□□□ -0.41
SYNPO2L-201ENST00000372873 TSGA10Q9BZW7 698 aa12.51□□□□□ -0.41
SYNPO2L-201ENST00000372873 EHD4Q9H223 541 aa12.51□□□□□ -0.41
SYNPO2L-201ENST00000372873 ARAP3Q8WWN8 1544 aa12.51□□□□□ -0.41
SYNPO2L-201ENST00000372873 PFDN1O60925 122 aa12.51□□□□□ -0.41
SYNPO2L-201ENST00000372873 CLSTN1O94985 981 aa12.51□□□□□ -0.41
SYNPO2L-201ENST00000372873 SEC24CP53992 1094 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms