RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 NBPF5PQ86XG9 351 aaPredicted RBP20.76■□□□□ 0.91
CD40-201ENST00000372276 C17orf53Q8N3J3 647 aaPredicted RBP20.76■□□□□ 0.91
CD40-201ENST00000372276 NUP133Q8WUM0 1156 aa20.76■□□□□ 0.91
CD40-201ENST00000372276 SRPRBQ9Y5M8 271 aaKnown RBP20.76■□□□□ 0.91
CD40-201ENST00000372276 MYL5Q02045 173 aa20.75■□□□□ 0.91
CD40-201ENST00000372276 SYCP1Q15431 976 aa20.75■□□□□ 0.91
CD40-201ENST00000372276 CCDC144BQ3MJ40 725 aa20.75■□□□□ 0.91
CD40-201ENST00000372276 CERS3Q8IU89 383 aa20.75■□□□□ 0.91
CD40-201ENST00000372276 ARPP21Q9UBL0 812 aaPredicted RBP20.75■□□□□ 0.91
CD40-201ENST00000372276 DUOX1Q9NRD9 1551 aa20.75■□□□□ 0.91
CD40-201ENST00000372276 DLEC1Q9Y238 1755 aa20.75■□□□□ 0.91
CD40-201ENST00000372276 MYH6P13533 1939 aa20.75■□□□□ 0.91
CD40-201ENST00000372276 CCP110O43303 1012 aa20.75■□□□□ 0.91
CD40-201ENST00000372276 SKILP12757 684 aa20.75■□□□□ 0.91
CD40-201ENST00000372276 LRMPQ12912 555 aa20.75■□□□□ 0.91
CD40-201ENST00000372276 TPD52L1Q16890 204 aaPredicted RBP20.75■□□□□ 0.91
CD40-201ENST00000372276 TBC1D9BQ66K14 1250 aa20.75■□□□□ 0.91
CD40-201ENST00000372276 NSUN4Q96CB9 384 aaKnown RBP20.75■□□□□ 0.91
CD40-201ENST00000372276 MAST2Q6P0Q8 1798 aa20.74■□□□□ 0.91
CD40-201ENST00000372276 CASZ1Q86V15 1759 aa20.74■□□□□ 0.91
CD40-201ENST00000372276 ADGRA1Q86SQ6 560 aa20.74■□□□□ 0.91
CD40-201ENST00000372276 SDR42E1Q8WUS8 393 aa20.74■□□□□ 0.91
CD40-201ENST00000372276 PYM1Q9BRP8 204 aaKnown RBP20.74■□□□□ 0.91
CD40-201ENST00000372276 ZKSCAN3Q9BRR0 538 aa20.74■□□□□ 0.91
CD40-201ENST00000372276 MYH13Q9UKX3 1938 aa20.74■□□□□ 0.91
CD40-201ENST00000372276 KRT2P35908 639 aa20.73■□□□□ 0.91
CD40-201ENST00000372276 PDE4BQ07343 736 aa20.73■□□□□ 0.91
CD40-201ENST00000372276 NCAPHQ15003 741 aa20.73■□□□□ 0.91
CD40-201ENST00000372276 NT5DC1Q5TFE4 455 aa20.73■□□□□ 0.91
CD40-201ENST00000372276 ENAHQ8N8S7 591 aaPredicted RBP20.73■□□□□ 0.91
CD40-201ENST00000372276 MLKLQ8NB16 471 aa20.73■□□□□ 0.91
CD40-201ENST00000372276 CELF1Q92879 486 aaKnown RBP20.73■□□□□ 0.91
CD40-201ENST00000372276 FERMT2Q96AC1 680 aa20.73■□□□□ 0.91
CD40-201ENST00000372276 BCL2L12Q9HB09 334 aa20.73■□□□□ 0.91
CD40-201ENST00000372276 FBXO2Q9UK22 296 aaPredicted RBP20.73■□□□□ 0.91
CD40-201ENST00000372276 RTCBQ9Y3I0 505 aaKnown RBP20.73■□□□□ 0.91
CD40-201ENST00000372276 CCDC88AQ3V6T2 1871 aa20.72■□□□□ 0.91
CD40-201ENST00000372276 TRIM75PA6NK02 468 aa20.72■□□□□ 0.91
CD40-201ENST00000372276 SMC2O95347 1197 aa20.72■□□□□ 0.91
CD40-201ENST00000372276 TNNT1P13805 278 aa20.72■□□□□ 0.91
CD40-201ENST00000372276 TOB1P50616 345 aaPredicted RBP20.72■□□□□ 0.91
CD40-201ENST00000372276 CTR9Q6PD62 1173 aa20.72■□□□□ 0.91
CD40-201ENST00000372276 STK11IPQ8N1F8 1099 aa20.72■□□□□ 0.91
CD40-201ENST00000372276 IQSEC3Q9UPP2 1182 aaPredicted RBP20.72■□□□□ 0.91
CD40-201ENST00000372276 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.72■□□□□ 0.91
CD40-201ENST00000372276 COL1A1P02452 1464 aaPredicted RBP20.72■□□□□ 0.91
CD40-201ENST00000372276 GUCY1A2P33402 732 aa20.71■□□□□ 0.91
CD40-201ENST00000372276 GSTO1P78417 241 aa20.71■□□□□ 0.91
CD40-201ENST00000372276 C3orf67Q6ZVT6 689 aa20.71■□□□□ 0.91
CD40-201ENST00000372276 FILIP1Q7Z7B0 1213 aa20.71■□□□□ 0.91
CD40-201ENST00000372276 FAM177A1Q8N128 213 aaPredicted RBP20.71■□□□□ 0.91
CD40-201ENST00000372276 CCDC112Q8NEF3 446 aa20.71■□□□□ 0.91
CD40-201ENST00000372276 CTCFLQ8NI51 663 aaPredicted RBP20.71■□□□□ 0.91
CD40-201ENST00000372276 PHF20Q9BVI0 1012 aa20.71■□□□□ 0.91
CD40-201ENST00000372276 AATFQ9NY61 560 aaKnown RBP eCLIP20.71■□□□□ 0.91
CD40-201ENST00000372276 LEMD3Q9Y2U8 911 aa20.71■□□□□ 0.91
CD40-201ENST00000372276 KIAA1551Q9HCM1 1747 aa20.71■□□□□ 0.91
CD40-201ENST00000372276 TRAPPC10P48553 1259 aa20.71■□□□□ 0.91
CD40-201ENST00000372276 WDR66Q8TBY9 1149 aa20.71■□□□□ 0.91
CD40-201ENST00000372276 XPO4Q9C0E2 1151 aaKnown RBP20.71■□□□□ 0.91
CD40-201ENST00000372276 IFNKQ9P0W0 207 aa20.71■□□□□ 0.91
CD40-201ENST00000372276 KCNJ14Q9UNX9 436 aa20.71■□□□□ 0.91
CD40-201ENST00000372276 BIN1O00499 593 aa20.7■□□□□ 0.9
CD40-201ENST00000372276 CTIFO43310 598 aaKnown RBP20.7■□□□□ 0.9
CD40-201ENST00000372276 SFPQP23246 707 aaKnown RBP eCLIP20.7■□□□□ 0.9
CD40-201ENST00000372276 KIF5BP33176 963 aa20.7■□□□□ 0.9
CD40-201ENST00000372276 FANCCQ00597 558 aa20.7■□□□□ 0.9
CD40-201ENST00000372276 MDM2Q00987 491 aaPredicted RBP20.7■□□□□ 0.9
CD40-201ENST00000372276 MECOMQ03112 1051 aa20.7■□□□□ 0.9
CD40-201ENST00000372276 TROAPQ12815 778 aa20.7■□□□□ 0.9
CD40-201ENST00000372276 POSTNQ15063 836 aa20.7■□□□□ 0.9
CD40-201ENST00000372276 LONRF3Q496Y0 759 aa20.7■□□□□ 0.9
CD40-201ENST00000372276 METTL16Q86W50 562 aaKnown RBP20.7■□□□□ 0.9
CD40-201ENST00000372276 ERCC4Q92889 916 aaPredicted RBP20.7■□□□□ 0.9
CD40-201ENST00000372276 CLIC6Q96NY7 704 aa20.7■□□□□ 0.9
CD40-201ENST00000372276 MYH2Q9UKX2 1941 aa20.69■□□□□ 0.9
CD40-201ENST00000372276 PSDA5PKW4 1024 aaPredicted RBP20.69■□□□□ 0.9
CD40-201ENST00000372276 USP17L12C9JPN9 530 aa20.69■□□□□ 0.9
CD40-201ENST00000372276 USP17L21D6R901 530 aa20.69■□□□□ 0.9
CD40-201ENST00000372276 DYNLL1P63167 89 aaKnown RBP20.69■□□□□ 0.9
CD40-201ENST00000372276 CCZ1BP86790 482 aa20.69■□□□□ 0.9
CD40-201ENST00000372276 CCZ1P86791 482 aaPredicted RBP20.69■□□□□ 0.9
CD40-201ENST00000372276 FUT2Q10981 343 aa20.69■□□□□ 0.9
CD40-201ENST00000372276 PTPN14Q15678 1187 aa20.69■□□□□ 0.9
CD40-201ENST00000372276 BICDL1Q6ZP65 573 aa20.69■□□□□ 0.9
CD40-201ENST00000372276 TMTC3Q6ZXV5 915 aa20.69■□□□□ 0.9
CD40-201ENST00000372276 KRT27Q7Z3Y8 459 aa20.69■□□□□ 0.9
CD40-201ENST00000372276 AMOTL1Q8IY63 956 aa20.69■□□□□ 0.9
CD40-201ENST00000372276 LAMB1P07942 1786 aa20.69■□□□□ 0.9
CD40-201ENST00000372276 NHSQ6T4R5 1651 aa20.69■□□□□ 0.9
CD40-201ENST00000372276 HMGB2P26583 209 aaKnown RBP20.68■□□□□ 0.9
CD40-201ENST00000372276 SMARCE1Q969G3 411 aa20.68■□□□□ 0.9
CD40-201ENST00000372276 DCP1AQ9NPI6 582 aaPredicted RBP20.68■□□□□ 0.9
CD40-201ENST00000372276 PCDHA5Q9Y5H7 936 aa20.68■□□□□ 0.9
CD40-201ENST00000372276 BRWD3Q6RI45 1802 aa20.68■□□□□ 0.9
CD40-201ENST00000372276 RIOK3O14730 519 aaKnown RBP20.67■□□□□ 0.9
CD40-201ENST00000372276 LDHCP07864 332 aa20.67■□□□□ 0.9
CD40-201ENST00000372276 SARSP49591 514 aaKnown RBP20.67■□□□□ 0.9
CD40-201ENST00000372276 GNAQP50148 359 aa20.67■□□□□ 0.9
CD40-201ENST00000372276 PNOCQ13519 176 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms