RNA–Protein interactions for RNA: ENST00000372275.5

TMEM254-203, Transcript of transmembrane protein 254, humanhuman

TSL 2 BASIC

Gene TMEM254, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-203ENST00000372275 SSH1Q8WYL5 1049 aa11.49□□□□□ -0.57
TMEM254-203ENST00000372275 PNMA3Q9UL41 463 aa11.49□□□□□ -0.57
TMEM254-203ENST00000372275 DENND2AQ9ULE3 1009 aa11.49□□□□□ -0.57
TMEM254-203ENST00000372275 SLC45A1Q9Y2W3 748 aa11.49□□□□□ -0.57
TMEM254-203ENST00000372275 KIF16BQ96L93 1317 aa11.49□□□□□ -0.57
TMEM254-203ENST00000372275 ANKLE1Q8NAG6 615 aa11.48□□□□□ -0.57
TMEM254-203ENST00000372275 MYLIPQ8WY64 445 aa11.48□□□□□ -0.57
TMEM254-203ENST00000372275 SENP6Q9GZR1 1112 aaPredicted RBP11.48□□□□□ -0.57
TMEM254-203ENST00000372275 FLRT1Q9NZU1 646 aa11.48□□□□□ -0.57
TMEM254-203ENST00000372275 CEP126Q9P2H0 1117 aa11.48□□□□□ -0.57
TMEM254-203ENST00000372275 COL11A1P12107 1806 aaPredicted RBP11.48□□□□□ -0.57
TMEM254-203ENST00000372275 GBF1Q92538 1859 aa11.48□□□□□ -0.57
TMEM254-203ENST00000372275 SALL1Q9NSC2 1324 aa11.47□□□□□ -0.57
TMEM254-203ENST00000372275 ZKSCAN1P17029 563 aaPredicted RBP11.47□□□□□ -0.57
TMEM254-203ENST00000372275 IRX3P78415 501 aaPredicted RBP11.47□□□□□ -0.57
TMEM254-203ENST00000372275 MAP3K10Q02779 954 aa11.47□□□□□ -0.57
TMEM254-203ENST00000372275 C9orf50Q5SZB4 431 aa11.47□□□□□ -0.57
TMEM254-203ENST00000372275 WDR78Q5VTH9 848 aa11.47□□□□□ -0.57
TMEM254-203ENST00000372275 SH3RF3Q8TEJ3 882 aaPredicted RBP11.47□□□□□ -0.57
TMEM254-203ENST00000372275 DNAJC18Q9H819 358 aa11.47□□□□□ -0.57
TMEM254-203ENST00000372275 GNL3LQ9NVN8 582 aaKnown RBP11.47□□□□□ -0.57
TMEM254-203ENST00000372275 SAP30BPQ9UHR5 308 aaKnown RBP11.47□□□□□ -0.57
TMEM254-203ENST00000372275 TCF20Q9UGU0 1960 aaKnown RBP11.47□□□□□ -0.57
TMEM254-203ENST00000372275 MYH8P13535 1937 aa11.47□□□□□ -0.57
TMEM254-203ENST00000372275 PLXNA1Q9UIW2 1896 aa11.46□□□□□ -0.57
TMEM254-203ENST00000372275 COL2A1P02458 1487 aaPredicted RBP11.46□□□□□ -0.57
TMEM254-203ENST00000372275 COL6A1P12109 1028 aa11.46□□□□□ -0.57
TMEM254-203ENST00000372275 CAP2P40123 477 aa11.46□□□□□ -0.57
TMEM254-203ENST00000372275 TFCP2Q12800 502 aa11.46□□□□□ -0.57
TMEM254-203ENST00000372275 GSE1Q14687 1217 aa11.46□□□□□ -0.57
TMEM254-203ENST00000372275 MAP3K21Q5TCX8 1036 aa11.46□□□□□ -0.57
TMEM254-203ENST00000372275 LHX8Q68G74 356 aa11.46□□□□□ -0.57
TMEM254-203ENST00000372275 ERICH6Q7L0X2 663 aa11.46□□□□□ -0.57
TMEM254-203ENST00000372275 MAPKAPK5Q8IW41 473 aa11.46□□□□□ -0.57
TMEM254-203ENST00000372275 PROCA1Q8NCQ7 364 aaPredicted RBP11.46□□□□□ -0.57
TMEM254-203ENST00000372275 XAGE2Q96GT9 111 aa11.46□□□□□ -0.57
TMEM254-203ENST00000372275 OSBPL5Q9H0X9 879 aaPredicted RBP11.46□□□□□ -0.57
TMEM254-203ENST00000372275 PRDM5Q9NQX1 630 aaPredicted RBP11.46□□□□□ -0.57
TMEM254-203ENST00000372275 RAI14Q9P0K7 980 aa11.46□□□□□ -0.57
TMEM254-203ENST00000372275 MYO9BQ13459 2157 aa11.45□□□□□ -0.58
TMEM254-203ENST00000372275 NAV1Q8NEY1 1877 aa11.45□□□□□ -0.58
TMEM254-203ENST00000372275 A0A1B0GUL7 405 aa11.45□□□□□ -0.58
TMEM254-203ENST00000372275 USP17L5A8MUK1 530 aa11.45□□□□□ -0.58
TMEM254-203ENST00000372275 GALR2O43603 387 aaPredicted RBP11.45□□□□□ -0.58
TMEM254-203ENST00000372275 CNGA1P29973 690 aa11.45□□□□□ -0.58
TMEM254-203ENST00000372275 GCLCP48506 637 aaPredicted RBP11.45□□□□□ -0.58
TMEM254-203ENST00000372275 HERVK_113P62684 666 aa11.45□□□□□ -0.58
TMEM254-203ENST00000372275 SHHQ15465 462 aa11.45□□□□□ -0.58
TMEM254-203ENST00000372275 GPR142Q7Z601 462 aa11.45□□□□□ -0.58
TMEM254-203ENST00000372275 TEX11Q8IYF3 940 aa11.45□□□□□ -0.58
TMEM254-203ENST00000372275 KIF12Q96FN5 646 aa11.45□□□□□ -0.58
TMEM254-203ENST00000372275 NEUROD6Q96NK8 337 aa11.45□□□□□ -0.58
TMEM254-203ENST00000372275 CDX2Q99626 313 aaPredicted RBP11.45□□□□□ -0.58
TMEM254-203ENST00000372275 MEIS3Q99687 375 aa11.45□□□□□ -0.58
TMEM254-203ENST00000372275 NUDT12Q9BQG2 462 aa11.45□□□□□ -0.58
TMEM254-203ENST00000372275 SNRKQ9NRH2 765 aa11.45□□□□□ -0.58
TMEM254-203ENST00000372275 RBPJLQ9UBG7 517 aa11.45□□□□□ -0.58
TMEM254-203ENST00000372275 ATP11BQ9Y2G3 1177 aa11.45□□□□□ -0.58
TMEM254-203ENST00000372275 GPR75-ASB3A0A0A6YYF3 556 aa11.44□□□□□ -0.58
TMEM254-203ENST00000372275 POTEB2H3BUK9 544 aa11.44□□□□□ -0.58
TMEM254-203ENST00000372275 UBTFL1P0CB47 393 aaPredicted RBP11.44□□□□□ -0.58
TMEM254-203ENST00000372275 RTP1P59025 263 aa11.44□□□□□ -0.58
TMEM254-203ENST00000372275 GJC2Q5T442 439 aaPredicted RBP11.44□□□□□ -0.58
TMEM254-203ENST00000372275 ZNF697Q5TEC3 545 aa11.44□□□□□ -0.58
TMEM254-203ENST00000372275 GPR153Q6NV75 609 aa11.44□□□□□ -0.58
TMEM254-203ENST00000372275 ADGRA1Q86SQ6 560 aa11.44□□□□□ -0.58
TMEM254-203ENST00000372275 TRPV1Q8NER1 839 aa11.44□□□□□ -0.58
TMEM254-203ENST00000372275 MAFAQ8NHW3 353 aaPredicted RBP11.44□□□□□ -0.58
TMEM254-203ENST00000372275 CWC22Q9HCG8 908 aaKnown RBP11.44□□□□□ -0.58
TMEM254-203ENST00000372275 PRDM6Q9NQX0 595 aa11.44□□□□□ -0.58
TMEM254-203ENST00000372275 AATFQ9NY61 560 aaKnown RBP eCLIP11.44□□□□□ -0.58
TMEM254-203ENST00000372275 HMG20BQ9P0W2 317 aa11.44□□□□□ -0.58
TMEM254-203ENST00000372275 MORF4L1Q9UBU8 362 aa11.44□□□□□ -0.58
TMEM254-203ENST00000372275 TNNQ9UQP3 1299 aa11.44□□□□□ -0.58
TMEM254-203ENST00000372275 PARP14Q460N5 1801 aa11.44□□□□□ -0.58
TMEM254-203ENST00000372275 CNMDO75829 334 aa11.43□□□□□ -0.58
TMEM254-203ENST00000372275 CYP2C19P33261 490 aa11.43□□□□□ -0.58
TMEM254-203ENST00000372275 ERVK-9P63128 1117 aa11.43□□□□□ -0.58
TMEM254-203ENST00000372275 ERVK-24P63145 666 aa11.43□□□□□ -0.58
TMEM254-203ENST00000372275 PDE3AQ14432 1141 aa11.43□□□□□ -0.58
TMEM254-203ENST00000372275 SH3RF1Q7Z6J0 888 aa11.43□□□□□ -0.58
TMEM254-203ENST00000372275 USP38Q8NB14 1042 aa11.43□□□□□ -0.58
TMEM254-203ENST00000372275 TGFBRAP1Q8WUH2 860 aa11.43□□□□□ -0.58
TMEM254-203ENST00000372275 NSUN4Q96CB9 384 aaKnown RBP11.43□□□□□ -0.58
TMEM254-203ENST00000372275 CDCA7LQ96GN5 454 aa11.43□□□□□ -0.58
TMEM254-203ENST00000372275 LBHD1Q9BQE6 289 aaPredicted RBP11.43□□□□□ -0.58
TMEM254-203ENST00000372275 TTYH1Q9H313 450 aaPredicted RBP11.43□□□□□ -0.58
TMEM254-203ENST00000372275 TMOD4Q9NZQ9 345 aa11.43□□□□□ -0.58
TMEM254-203ENST00000372275 PALD1Q9ULE6 856 aa11.43□□□□□ -0.58
TMEM254-203ENST00000372275 PTPRCP08575 1304 aa11.42□□□□□ -0.58
TMEM254-203ENST00000372275 CIAO1O76071 339 aa11.42□□□□□ -0.58
TMEM254-203ENST00000372275 IL15P40933 162 aaPredicted RBP11.42□□□□□ -0.58
TMEM254-203ENST00000372275 MCAMP43121 646 aa11.42□□□□□ -0.58
TMEM254-203ENST00000372275 BACE1P56817 501 aa11.42□□□□□ -0.58
TMEM254-203ENST00000372275 DYNLL1P63167 89 aaKnown RBP11.42□□□□□ -0.58
TMEM254-203ENST00000372275 PABPC4Q13310 644 aaKnown RBP eCLIP11.42□□□□□ -0.58
TMEM254-203ENST00000372275 SH3D19Q5HYK7 790 aa11.42□□□□□ -0.58
TMEM254-203ENST00000372275 MORN1Q5T089 497 aa11.42□□□□□ -0.58
TMEM254-203ENST00000372275 CCAR1Q8IX12 1150 aaKnown RBP11.42□□□□□ -0.58
TMEM254-203ENST00000372275 ZGPATQ8N5A5 531 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms