RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 KLHL23Q8NBE8 558 aa10.11□□□□□ -0.79
ATG4A-203ENST00000372232 CTCFLQ8NI51 663 aaPredicted RBP10.11□□□□□ -0.79
ATG4A-203ENST00000372232 FMNL2Q96PY5 1086 aa10.11□□□□□ -0.79
ATG4A-203ENST00000372232 UTP14AQ9BVJ6 771 aaKnown RBP10.11□□□□□ -0.79
ATG4A-203ENST00000372232 ARFGAP3Q9NP61 516 aa10.11□□□□□ -0.79
ATG4A-203ENST00000372232 TCHHQ07283 1943 aa10.11□□□□□ -0.79
ATG4A-203ENST00000372232 HSPA4P34932 840 aa10.11□□□□□ -0.79
ATG4A-203ENST00000372232 CABP4P57796 275 aa10.11□□□□□ -0.79
ATG4A-203ENST00000372232 CCT2P78371 535 aaKnown RBP10.11□□□□□ -0.79
ATG4A-203ENST00000372232 HDLBPQ00341 1268 aaKnown RBP10.11□□□□□ -0.79
ATG4A-203ENST00000372232 MTMR3Q13615 1198 aa10.11□□□□□ -0.79
ATG4A-203ENST00000372232 GCKRQ14397 625 aa10.11□□□□□ -0.79
ATG4A-203ENST00000372232 PREPLQ4J6C6 727 aaPredicted RBP10.11□□□□□ -0.79
ATG4A-203ENST00000372232 N4BP2L2Q92802 583 aaPredicted RBP10.11□□□□□ -0.79
ATG4A-203ENST00000372232 KCNB2Q92953 911 aa10.11□□□□□ -0.79
ATG4A-203ENST00000372232 JPH2Q9BR39 696 aaPredicted RBP10.11□□□□□ -0.79
ATG4A-203ENST00000372232 METTL22Q9BUU2 404 aaPredicted RBP10.11□□□□□ -0.79
ATG4A-203ENST00000372232 ECHDC1Q9NTX5 307 aa10.11□□□□□ -0.79
ATG4A-203ENST00000372232 PNMA3Q9UL41 463 aa10.11□□□□□ -0.79
ATG4A-203ENST00000372232 CNPY2Q9Y2B0 182 aa10.11□□□□□ -0.79
ATG4A-203ENST00000372232 KINO60870 393 aaKnown RBP10.1□□□□□ -0.79
ATG4A-203ENST00000372232 IFIT2P09913 472 aaKnown RBP10.1□□□□□ -0.79
ATG4A-203ENST00000372232 DPYDQ12882 1025 aa10.1□□□□□ -0.79
ATG4A-203ENST00000372232 NR1H3Q13133 447 aa10.1□□□□□ -0.79
ATG4A-203ENST00000372232 CC2D2BQ6DHV5 1058 aa10.1□□□□□ -0.79
ATG4A-203ENST00000372232 ANKRD13DQ6ZTN6 518 aa10.1□□□□□ -0.79
ATG4A-203ENST00000372232 DDX11Q96FC9 970 aa10.1□□□□□ -0.79
ATG4A-203ENST00000372232 CBX8Q9HC52 389 aa10.1□□□□□ -0.79
ATG4A-203ENST00000372232 TRMT1Q9NXH9 659 aaKnown RBP10.1□□□□□ -0.79
ATG4A-203ENST00000372232 VPS18Q9P253 973 aa10.1□□□□□ -0.79
ATG4A-203ENST00000372232 EIF3JO75822 258 aaKnown RBP10.1□□□□□ -0.79
ATG4A-203ENST00000372232 SASH1O94885 1247 aa10.1□□□□□ -0.79
ATG4A-203ENST00000372232 CCNHP51946 323 aaPredicted RBP10.1□□□□□ -0.79
ATG4A-203ENST00000372232 TYRO3Q06418 890 aa10.1□□□□□ -0.79
ATG4A-203ENST00000372232 CHRDL2Q6WN34 429 aa10.1□□□□□ -0.79
ATG4A-203ENST00000372232 ANKMY2Q8IV38 441 aa10.1□□□□□ -0.79
ATG4A-203ENST00000372232 GPR161Q8N6U8 529 aaKnown RBP10.1□□□□□ -0.79
ATG4A-203ENST00000372232 PRPF38AQ8NAV1 312 aaKnown RBP10.1□□□□□ -0.79
ATG4A-203ENST00000372232 MYD88Q99836 296 aa10.1□□□□□ -0.79
ATG4A-203ENST00000372232 SPATS2LQ9NUQ6 558 aaKnown RBP10.1□□□□□ -0.79
ATG4A-203ENST00000372232 COLQQ9Y215 455 aaPredicted RBP10.1□□□□□ -0.79
ATG4A-203ENST00000372232 AKAP2Q9Y2D5 859 aa10.1□□□□□ -0.79
ATG4A-203ENST00000372232 C5P01031 1676 aa10.09□□□□□ -0.79
ATG4A-203ENST00000372232 SLC10A3P09131 477 aa10.09□□□□□ -0.79
ATG4A-203ENST00000372232 NF2P35240 595 aa10.09□□□□□ -0.79
ATG4A-203ENST00000372232 USP46P62068 366 aa10.09□□□□□ -0.79
ATG4A-203ENST00000372232 G3BP1Q13283 466 aaKnown RBP eCLIP10.09□□□□□ -0.79
ATG4A-203ENST00000372232 SARM1Q6SZW1 724 aa10.09□□□□□ -0.79
ATG4A-203ENST00000372232 AACSQ86V21 672 aa10.09□□□□□ -0.79
ATG4A-203ENST00000372232 ARMC2Q8NEN0 867 aa10.09□□□□□ -0.79
ATG4A-203ENST00000372232 GPATCH3Q96I76 525 aa10.09□□□□□ -0.79
ATG4A-203ENST00000372232 BAG1Q99933 345 aaPredicted RBP10.09□□□□□ -0.79
ATG4A-203ENST00000372232 LSG1Q9H089 658 aaKnown RBP10.09□□□□□ -0.79
ATG4A-203ENST00000372232 PRDM11Q9NQV5 511 aa10.09□□□□□ -0.79
ATG4A-203ENST00000372232 PHLPP2Q6ZVD8 1323 aa10.09□□□□□ -0.79
ATG4A-203ENST00000372232 WDR17Q8IZU2 1322 aa10.09□□□□□ -0.79
ATG4A-203ENST00000372232 ATMINO43313 823 aaPredicted RBP10.08□□□□□ -0.8
ATG4A-203ENST00000372232 PIP4K2AP48426 406 aaPredicted RBP10.08□□□□□ -0.8
ATG4A-203ENST00000372232 APOBRQ0VD83 1088 aa10.08□□□□□ -0.8
ATG4A-203ENST00000372232 MRFAP1L1Q96HT8 127 aa10.08□□□□□ -0.8
ATG4A-203ENST00000372232 CPSF2Q9P2I0 782 aaKnown RBP10.08□□□□□ -0.8
ATG4A-203ENST00000372232 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.08□□□□□ -0.8
ATG4A-203ENST00000372232 PKD1L3Q7Z443 1732 aa10.08□□□□□ -0.8
ATG4A-203ENST00000372232 SOS2Q07890 1332 aaPredicted RBP10.08□□□□□ -0.8
ATG4A-203ENST00000372232 ROBO1Q9Y6N7 1651 aa10.08□□□□□ -0.8
ATG4A-203ENST00000372232 PSDA5PKW4 1024 aaPredicted RBP10.08□□□□□ -0.8
ATG4A-203ENST00000372232 KCNJ6P48051 423 aa10.08□□□□□ -0.8
ATG4A-203ENST00000372232 RPS6KA3P51812 740 aa10.08□□□□□ -0.8
ATG4A-203ENST00000372232 SLC5A9Q2M3M2 681 aa10.08□□□□□ -0.8
ATG4A-203ENST00000372232 FOXD4L6Q3SYB3 417 aaPredicted RBP10.08□□□□□ -0.8
ATG4A-203ENST00000372232 EPHA10Q5JZY3 1008 aa10.08□□□□□ -0.8
ATG4A-203ENST00000372232 WLSQ5T9L3 541 aa10.08□□□□□ -0.8
ATG4A-203ENST00000372232 FBXW10Q5XX13 1052 aa10.08□□□□□ -0.8
ATG4A-203ENST00000372232 FOXD4L3Q6VB84 417 aaPredicted RBP10.08□□□□□ -0.8
ATG4A-203ENST00000372232 PNMA1Q8ND90 353 aa10.08□□□□□ -0.8
ATG4A-203ENST00000372232 EAF2Q96CJ1 260 aaPredicted RBP10.08□□□□□ -0.8
ATG4A-203ENST00000372232 CABS1Q96KC9 395 aa10.08□□□□□ -0.8
ATG4A-203ENST00000372232 UPF3BQ9BZI7 483 aaKnown RBP10.08□□□□□ -0.8
ATG4A-203ENST00000372232 CCDC69A6NI79 296 aa10.07□□□□□ -0.8
ATG4A-203ENST00000372232 EXOC5O00471 708 aa10.07□□□□□ -0.8
ATG4A-203ENST00000372232 CHUKO15111 745 aa10.07□□□□□ -0.8
ATG4A-203ENST00000372232 LIG3P49916 1009 aa10.07□□□□□ -0.8
ATG4A-203ENST00000372232 ARID5BQ14865 1188 aa10.07□□□□□ -0.8
ATG4A-203ENST00000372232 MAP3K11Q16584 847 aa10.07□□□□□ -0.8
ATG4A-203ENST00000372232 IER5LQ5T953 404 aa10.07□□□□□ -0.8
ATG4A-203ENST00000372232 TOM1L2Q6ZVM7 507 aa10.07□□□□□ -0.8
ATG4A-203ENST00000372232 ZCRB1Q8TBF4 217 aaKnown RBP10.07□□□□□ -0.8
ATG4A-203ENST00000372232 ZKSCAN4Q969J2 545 aaPredicted RBP10.07□□□□□ -0.8
ATG4A-203ENST00000372232 PCDH11XQ9BZA7 1347 aa10.07□□□□□ -0.8
ATG4A-203ENST00000372232 PCDH11YQ9BZA8 1340 aa10.07□□□□□ -0.8
ATG4A-203ENST00000372232 SNUPNO95149 360 aaKnown RBP10.07□□□□□ -0.8
ATG4A-203ENST00000372232 RBBP5Q15291 538 aaKnown RBP10.07□□□□□ -0.8
ATG4A-203ENST00000372232 PDCD2Q16342 344 aaPredicted RBP10.07□□□□□ -0.8
ATG4A-203ENST00000372232 LRRFIP1Q32MZ4 808 aaKnown RBP10.07□□□□□ -0.8
ATG4A-203ENST00000372232 GLYCTKQ8IVS8 523 aa10.07□□□□□ -0.8
ATG4A-203ENST00000372232 ZNF526Q8TF50 670 aaPredicted RBP10.07□□□□□ -0.8
ATG4A-203ENST00000372232 RUFY2Q8WXA3 655 aa10.07□□□□□ -0.8
ATG4A-203ENST00000372232 MKL1Q969V6 931 aa10.07□□□□□ -0.8
ATG4A-203ENST00000372232 EVI5LQ96CN4 794 aa10.07□□□□□ -0.8
ATG4A-203ENST00000372232 THOC1Q96FV9 657 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms