RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 APOBRQ0VD83 1088 aa16.46■□□□□ 0.23
LDB3-204ENST00000372066 TRDNQ13061 729 aa16.46■□□□□ 0.23
LDB3-204ENST00000372066 ZBED3Q96IU2 234 aaPredicted RBP16.46■□□□□ 0.23
LDB3-204ENST00000372066 RBSNQ9H1K0 784 aa16.46■□□□□ 0.23
LDB3-204ENST00000372066 PAPPA2Q9BXP8 1791 aa16.46■□□□□ 0.22
LDB3-204ENST00000372066 JAK2O60674 1132 aa16.45■□□□□ 0.22
LDB3-204ENST00000372066 PDIA3P30101 505 aaKnown RBP16.45■□□□□ 0.22
LDB3-204ENST00000372066 RESTQ13127 1097 aa16.45■□□□□ 0.22
LDB3-204ENST00000372066 C15orf52Q6ZUT6 534 aaKnown RBP16.45■□□□□ 0.22
LDB3-204ENST00000372066 ZNF296Q8WUU4 475 aaPredicted RBP16.45■□□□□ 0.22
LDB3-204ENST00000372066 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.45■□□□□ 0.22
LDB3-204ENST00000372066 ANGEL1Q9UNK9 670 aaKnown RBP16.45■□□□□ 0.22
LDB3-204ENST00000372066 MAST2Q6P0Q8 1798 aa16.44■□□□□ 0.22
LDB3-204ENST00000372066 PTPDC1A2A3K4 754 aa16.44■□□□□ 0.22
LDB3-204ENST00000372066 F8W031 263 aaPredicted RBP16.44■□□□□ 0.22
LDB3-204ENST00000372066 PRC1O43663 620 aa16.44■□□□□ 0.22
LDB3-204ENST00000372066 SREBF2Q12772 1141 aa16.44■□□□□ 0.22
LDB3-204ENST00000372066 RASGRF1Q13972 1273 aa16.44■□□□□ 0.22
LDB3-204ENST00000372066 UBE4AQ14139 1066 aa16.44■□□□□ 0.22
LDB3-204ENST00000372066 UVSSAQ2YD98 709 aa16.44■□□□□ 0.22
LDB3-204ENST00000372066 ZNF804AQ7Z570 1209 aa16.44■□□□□ 0.22
LDB3-204ENST00000372066 CERS5Q8N5B7 392 aa16.44■□□□□ 0.22
LDB3-204ENST00000372066 LRRC2Q9BYS8 371 aa16.44■□□□□ 0.22
LDB3-204ENST00000372066 DEFB129Q9H1M3 183 aa16.44■□□□□ 0.22
LDB3-204ENST00000372066 CFAP45Q9UL16 551 aa16.44■□□□□ 0.22
LDB3-204ENST00000372066 PKN2Q16513 984 aaKnown RBP16.43■□□□□ 0.22
LDB3-204ENST00000372066 HS1BP3Q53T59 392 aa16.43■□□□□ 0.22
LDB3-204ENST00000372066 LDLRAD1Q5T700 205 aa16.43■□□□□ 0.22
LDB3-204ENST00000372066 GNL3LQ9NVN8 582 aaKnown RBP16.43■□□□□ 0.22
LDB3-204ENST00000372066 GPR25O00155 361 aa16.43■□□□□ 0.22
LDB3-204ENST00000372066 ZBTB22O15209 634 aa16.43■□□□□ 0.22
LDB3-204ENST00000372066 TTC6Q86TZ1 520 aa16.43■□□□□ 0.22
LDB3-204ENST00000372066 SLC10A4Q96EP9 437 aa16.43■□□□□ 0.22
LDB3-204ENST00000372066 TMEM87BQ96K49 555 aa16.43■□□□□ 0.22
LDB3-204ENST00000372066 SPATA32Q96LK8 384 aa16.43■□□□□ 0.22
LDB3-204ENST00000372066 STRBPQ96SI9 672 aaKnown RBP16.43■□□□□ 0.22
LDB3-204ENST00000372066 FZD1Q9UP38 647 aa16.43■□□□□ 0.22
LDB3-204ENST00000372066 HPS5Q9UPZ3 1129 aa16.43■□□□□ 0.22
LDB3-204ENST00000372066 PCDHAC2Q9Y5I4 1007 aa16.43■□□□□ 0.22
LDB3-204ENST00000372066 IRS2Q9Y4H2 1338 aa16.42■□□□□ 0.22
LDB3-204ENST00000372066 PSME4Q14997 1843 aa16.42■□□□□ 0.22
LDB3-204ENST00000372066 PATL2C9JE40 543 aaKnown RBP16.42■□□□□ 0.22
LDB3-204ENST00000372066 MYO1BO43795 1136 aa16.42■□□□□ 0.22
LDB3-204ENST00000372066 SLC34A2O95436 690 aa16.42■□□□□ 0.22
LDB3-204ENST00000372066 CTDNEP1O95476 244 aa16.42■□□□□ 0.22
LDB3-204ENST00000372066 IL1R1P14778 569 aa16.42■□□□□ 0.22
LDB3-204ENST00000372066 HAND2P61296 217 aa16.42■□□□□ 0.22
LDB3-204ENST00000372066 CFAP100Q494V2 611 aa16.42■□□□□ 0.22
LDB3-204ENST00000372066 SPRYD7Q5W111 196 aa16.42■□□□□ 0.22
LDB3-204ENST00000372066 TMED8Q6PL24 325 aaPredicted RBP16.42■□□□□ 0.22
LDB3-204ENST00000372066 FERMT3Q86UX7 667 aa16.42■□□□□ 0.22
LDB3-204ENST00000372066 MTMR14Q8NCE2 650 aa16.42■□□□□ 0.22
LDB3-204ENST00000372066 PDLIM2Q96JY6 352 aa16.42■□□□□ 0.22
LDB3-204ENST00000372066 JAG2Q9Y219 1238 aa16.42■□□□□ 0.22
LDB3-204ENST00000372066 CLRN2A0PK11 232 aa16.41■□□□□ 0.22
LDB3-204ENST00000372066 SEMA3EO15041 775 aa16.41■□□□□ 0.22
LDB3-204ENST00000372066 PPP1R12BO60237 982 aaPredicted RBP16.41■□□□□ 0.22
LDB3-204ENST00000372066 RBM5P52756 815 aaKnown RBP eCLIP16.41■□□□□ 0.22
LDB3-204ENST00000372066 MTA3Q9BTC8 594 aa16.41■□□□□ 0.22
LDB3-204ENST00000372066 CNNM2Q9H8M5 875 aa16.41■□□□□ 0.22
LDB3-204ENST00000372066 PDS5AQ29RF7 1337 aaKnown RBP16.41■□□□□ 0.22
LDB3-204ENST00000372066 ECM29Q5VYK3 1845 aa16.4■□□□□ 0.22
LDB3-204ENST00000372066 GOLGA6L4A6NEF3 574 aa16.4■□□□□ 0.22
LDB3-204ENST00000372066 SUPT20HL1Q3ZLR7 823 aa16.4■□□□□ 0.22
LDB3-204ENST00000372066 MAGEB6Q8N7X4 407 aa16.4■□□□□ 0.22
LDB3-204ENST00000372066 LEO1Q8WVC0 666 aaPredicted RBP16.4■□□□□ 0.22
LDB3-204ENST00000372066 DDX11Q96FC9 970 aa16.4■□□□□ 0.22
LDB3-204ENST00000372066 PRMT6Q96LA8 375 aaPredicted RBP16.4■□□□□ 0.22
LDB3-204ENST00000372066 ZNF396Q96N95 335 aaPredicted RBP16.4■□□□□ 0.22
LDB3-204ENST00000372066 NACAP1Q9BZK3 213 aa16.4■□□□□ 0.22
LDB3-204ENST00000372066 VEZTQ9HBM0 779 aa16.4■□□□□ 0.22
LDB3-204ENST00000372066 DDX19AQ9NUU7 478 aaKnown RBP16.4■□□□□ 0.22
LDB3-204ENST00000372066 PPP2R3BQ9Y5P8 575 aa16.4■□□□□ 0.22
LDB3-204ENST00000372066 KLF18A0A0U1RQI7 1052 aa16.39■□□□□ 0.21
LDB3-204ENST00000372066 SPDYE2BA6NHP3 402 aa16.39■□□□□ 0.21
LDB3-204ENST00000372066 GOLGA8BA8MQT2 603 aa16.39■□□□□ 0.21
LDB3-204ENST00000372066 IGSF3O75054 1194 aa16.39■□□□□ 0.21
LDB3-204ENST00000372066 FKTNO75072 461 aa16.39■□□□□ 0.21
LDB3-204ENST00000372066 APPP05067 770 aa16.39■□□□□ 0.21
LDB3-204ENST00000372066 SPDYE6P0CI01 402 aa16.39■□□□□ 0.21
LDB3-204ENST00000372066 ANTXR2P58335 489 aa16.39■□□□□ 0.21
LDB3-204ENST00000372066 FKBP1AP62942 108 aaKnown RBP16.39■□□□□ 0.21
LDB3-204ENST00000372066 NOM1Q5C9Z4 860 aaKnown RBP16.39■□□□□ 0.21
LDB3-204ENST00000372066 NAPBQ9H115 298 aa16.39■□□□□ 0.21
LDB3-204ENST00000372066 R3HDMLQ9H3Y0 253 aa16.39■□□□□ 0.21
LDB3-204ENST00000372066 CDKL5O76039 1030 aa16.38■□□□□ 0.21
LDB3-204ENST00000372066 ALDH1A1P00352 501 aa16.38■□□□□ 0.21
LDB3-204ENST00000372066 INHBEP58166 350 aa16.38■□□□□ 0.21
LDB3-204ENST00000372066 CCT2P78371 535 aaKnown RBP16.38■□□□□ 0.21
LDB3-204ENST00000372066 CAVIN4Q5BKX8 364 aa16.38■□□□□ 0.21
LDB3-204ENST00000372066 CLMNQ96JQ2 1002 aa16.38■□□□□ 0.21
LDB3-204ENST00000372066 KRT23Q9C075 422 aa16.38■□□□□ 0.21
LDB3-204ENST00000372066 NBPF3Q9H094 633 aa16.38■□□□□ 0.21
LDB3-204ENST00000372066 NAP1L2Q9ULW6 460 aaPredicted RBP16.38■□□□□ 0.21
LDB3-204ENST00000372066 MANSC4A6NHS7 340 aaPredicted RBP16.38■□□□□ 0.21
LDB3-204ENST00000372066 ESPNB1AK53 854 aa16.38■□□□□ 0.21
LDB3-204ENST00000372066 MBD4O95243 580 aa16.38■□□□□ 0.21
LDB3-204ENST00000372066 MAP3K11Q16584 847 aa16.38■□□□□ 0.21
LDB3-204ENST00000372066 NBPF12Q5TAG4 269 aaPredicted RBP16.38■□□□□ 0.21
LDB3-204ENST00000372066 CPLX2Q6PUV4 134 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms