RNA–Protein interactions for RNA: ENST00000371120.7

ATG4C-203, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-203ENST00000371120 KIAA0825Q8IV33 1275 aa13.96□□□□□ -0.17
ATG4C-203ENST00000371120 POLR3DP05423 398 aaPredicted RBP13.96□□□□□ -0.18
ATG4C-203ENST00000371120 GNAQP50148 359 aa13.96□□□□□ -0.18
ATG4C-203ENST00000371120 CTDSPL2Q05D32 466 aa13.96□□□□□ -0.18
ATG4C-203ENST00000371120 WTAPQ15007 396 aa13.96□□□□□ -0.18
ATG4C-203ENST00000371120 APOA5Q6Q788 366 aa13.96□□□□□ -0.18
ATG4C-203ENST00000371120 GMCL1P1Q8NEA9 526 aa13.96□□□□□ -0.18
ATG4C-203ENST00000371120 SSC5DA1L4H1 1573 aa13.95□□□□□ -0.18
ATG4C-203ENST00000371120 WNT10BO00744 389 aa13.95□□□□□ -0.18
ATG4C-203ENST00000371120 GRM4Q14833 912 aa13.95□□□□□ -0.18
ATG4C-203ENST00000371120 RAB3GAP1Q15042 981 aa13.95□□□□□ -0.18
ATG4C-203ENST00000371120 KIF4BQ2VIQ3 1234 aa13.95□□□□□ -0.18
ATG4C-203ENST00000371120 SH3BP5LQ7L8J4 393 aa13.95□□□□□ -0.18
ATG4C-203ENST00000371120 DAXXQ9UER7 740 aaPredicted RBP13.95□□□□□ -0.18
ATG4C-203ENST00000371120 B4E1Z4 1266 aa13.95□□□□□ -0.18
ATG4C-203ENST00000371120 H7C1D1 291 aa13.95□□□□□ -0.18
ATG4C-203ENST00000371120 RAD17O75943 681 aa13.95□□□□□ -0.18
ATG4C-203ENST00000371120 TMEM179Q6ZVK1 233 aa13.95□□□□□ -0.18
ATG4C-203ENST00000371120 MAPKAPK5Q8IW41 473 aa13.95□□□□□ -0.18
ATG4C-203ENST00000371120 PRMT6Q96LA8 375 aaPredicted RBP13.95□□□□□ -0.18
ATG4C-203ENST00000371120 UPF3BQ9BZI7 483 aaKnown RBP13.95□□□□□ -0.18
ATG4C-203ENST00000371120 TNKSO95271 1327 aa13.95□□□□□ -0.18
ATG4C-203ENST00000371120 IFNAR1P17181 557 aa13.94□□□□□ -0.18
ATG4C-203ENST00000371120 TEPSINQ96N21 525 aa13.94□□□□□ -0.18
ATG4C-203ENST00000371120 MXD3Q9BW11 206 aa13.94□□□□□ -0.18
ATG4C-203ENST00000371120 TOP1P11387 765 aaKnown RBP13.94□□□□□ -0.18
ATG4C-203ENST00000371120 MAP3K11Q16584 847 aa13.94□□□□□ -0.18
ATG4C-203ENST00000371120 ATL3Q6DD88 541 aa13.94□□□□□ -0.18
ATG4C-203ENST00000371120 ENAHQ8N8S7 591 aaPredicted RBP13.94□□□□□ -0.18
ATG4C-203ENST00000371120 WASF1Q92558 559 aa13.94□□□□□ -0.18
ATG4C-203ENST00000371120 UBAC1Q9BSL1 405 aa13.94□□□□□ -0.18
ATG4C-203ENST00000371120 KDM4AO75164 1064 aa13.93□□□□□ -0.18
ATG4C-203ENST00000371120 TMEM67Q5HYA8 995 aa13.93□□□□□ -0.18
ATG4C-203ENST00000371120 ARHGAP27Q6ZUM4 889 aa13.93□□□□□ -0.18
ATG4C-203ENST00000371120 MICALL2Q8IY33 904 aa13.93□□□□□ -0.18
ATG4C-203ENST00000371120 CNOT7Q9UIV1 285 aaKnown RBP13.93□□□□□ -0.18
ATG4C-203ENST00000371120 IQCA1LA6NCM1 817 aa13.93□□□□□ -0.18
ATG4C-203ENST00000371120 GLTPD2A6NH11 291 aa13.93□□□□□ -0.18
ATG4C-203ENST00000371120 PLCD1P51178 756 aa13.93□□□□□ -0.18
ATG4C-203ENST00000371120 NSUN7Q8NE18 718 aaKnown RBP13.93□□□□□ -0.18
ATG4C-203ENST00000371120 RNF26Q9BY78 433 aaPredicted RBP13.93□□□□□ -0.18
ATG4C-203ENST00000371120 DNAJC18Q9H819 358 aa13.93□□□□□ -0.18
ATG4C-203ENST00000371120 SH3GLB2Q9NR46 395 aa13.93□□□□□ -0.18
ATG4C-203ENST00000371120 ZNF219Q9P2Y4 722 aaPredicted RBP13.93□□□□□ -0.18
ATG4C-203ENST00000371120 BRD1O95696 1058 aa13.93□□□□□ -0.18
ATG4C-203ENST00000371120 NTRK3Q16288 839 aa13.93□□□□□ -0.18
ATG4C-203ENST00000371120 DCAF4Q8WV16 495 aa13.93□□□□□ -0.18
ATG4C-203ENST00000371120 BRF1Q92994 677 aa13.93□□□□□ -0.18
ATG4C-203ENST00000371120 FBXW7Q969H0 707 aa13.93□□□□□ -0.18
ATG4C-203ENST00000371120 SPZ1Q9BXG8 430 aa13.93□□□□□ -0.18
ATG4C-203ENST00000371120 BCL11AQ9H165 835 aa13.93□□□□□ -0.18
ATG4C-203ENST00000371120 SLKQ9H2G2 1235 aaPredicted RBP13.93□□□□□ -0.18
ATG4C-203ENST00000371120 HAND2P61296 217 aa13.92□□□□□ -0.18
ATG4C-203ENST00000371120 SCRN1Q12765 414 aa13.92□□□□□ -0.18
ATG4C-203ENST00000371120 TROAPQ12815 778 aa13.92□□□□□ -0.18
ATG4C-203ENST00000371120 DCAF15Q66K64 600 aa13.92□□□□□ -0.18
ATG4C-203ENST00000371120 CPLX2Q6PUV4 134 aaKnown RBP13.92□□□□□ -0.18
ATG4C-203ENST00000371120 ZNF444Q8N0Y2 327 aaPredicted RBP13.92□□□□□ -0.18
ATG4C-203ENST00000371120 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.92□□□□□ -0.18
ATG4C-203ENST00000371120 IFIT3O14879 490 aaKnown RBP13.92□□□□□ -0.18
ATG4C-203ENST00000371120 ZBTB43O43298 467 aa13.92□□□□□ -0.18
ATG4C-203ENST00000371120 FMNL1O95466 1100 aaPredicted RBP13.92□□□□□ -0.18
ATG4C-203ENST00000371120 CYP2D6P10635 497 aa13.92□□□□□ -0.18
ATG4C-203ENST00000371120 KIF5BP33176 963 aa13.92□□□□□ -0.18
ATG4C-203ENST00000371120 ASPRV1Q53RT3 343 aa13.92□□□□□ -0.18
ATG4C-203ENST00000371120 PPP1R18Q6NYC8 613 aa13.92□□□□□ -0.18
ATG4C-203ENST00000371120 SYNE3Q6ZMZ3 975 aa13.92□□□□□ -0.18
ATG4C-203ENST00000371120 ZNF654Q8IZM8 581 aa13.92□□□□□ -0.18
ATG4C-203ENST00000371120 GMCL1Q96IK5 515 aa13.92□□□□□ -0.18
ATG4C-203ENST00000371120 BRPF3Q9ULD4 1205 aa13.92□□□□□ -0.18
ATG4C-203ENST00000371120 JAG2Q9Y219 1238 aa13.92□□□□□ -0.18
ATG4C-203ENST00000371120 CCDC69A6NI79 296 aa13.91□□□□□ -0.18
ATG4C-203ENST00000371120 FUT2Q10981 343 aa13.91□□□□□ -0.18
ATG4C-203ENST00000371120 NFIAQ12857 509 aa13.91□□□□□ -0.18
ATG4C-203ENST00000371120 C9orf131Q5VYM1 1079 aa13.91□□□□□ -0.18
ATG4C-203ENST00000371120 CATIPQ7Z7H3 387 aa13.91□□□□□ -0.18
ATG4C-203ENST00000371120 IL17RBQ9NRM6 502 aa13.91□□□□□ -0.18
ATG4C-203ENST00000371120 MTMR4Q9NYA4 1195 aa13.91□□□□□ -0.18
ATG4C-203ENST00000371120 PNMA2Q9UL42 364 aa13.91□□□□□ -0.18
ATG4C-203ENST00000371120 WDR33Q9C0J8 1336 aaKnown RBP13.91□□□□□ -0.18
ATG4C-203ENST00000371120 RLFQ13129 1914 aa13.91□□□□□ -0.18
ATG4C-203ENST00000371120 MINDY4BA8MYZ0 360 aa13.91□□□□□ -0.18
ATG4C-203ENST00000371120 LMOD1P29536 600 aaPredicted RBP13.91□□□□□ -0.18
ATG4C-203ENST00000371120 SH2D4AQ9H788 454 aa13.91□□□□□ -0.18
ATG4C-203ENST00000371120 KANSL2Q9H9L4 492 aa13.91□□□□□ -0.18
ATG4C-203ENST00000371120 FAM217BQ9NTX9 383 aaPredicted RBP13.91□□□□□ -0.18
ATG4C-203ENST00000371120 KLF18A0A0U1RQI7 1052 aa13.9□□□□□ -0.18
ATG4C-203ENST00000371120 PRPF3O43395 683 aaKnown RBP13.9□□□□□ -0.18
ATG4C-203ENST00000371120 LARGE1O95461 756 aa13.9□□□□□ -0.18
ATG4C-203ENST00000371120 TTLL1O95922 423 aa13.9□□□□□ -0.18
ATG4C-203ENST00000371120 IFIT1BQ5T764 474 aaKnown RBP13.9□□□□□ -0.18
ATG4C-203ENST00000371120 NBPF11Q86T75 865 aa13.9□□□□□ -0.18
ATG4C-203ENST00000371120 MTMR8Q96EF0 704 aa13.9□□□□□ -0.18
ATG4C-203ENST00000371120 TDRD3Q9H7E2 651 aaKnown RBP13.9□□□□□ -0.18
ATG4C-203ENST00000371120 MKNK2Q9HBH9 465 aa13.9□□□□□ -0.18
ATG4C-203ENST00000371120 RNF181Q9P0P0 153 aa13.9□□□□□ -0.18
ATG4C-203ENST00000371120 SLC12A7Q9Y666 1083 aa13.9□□□□□ -0.18
ATG4C-203ENST00000371120 PALM3A6NDB9 673 aaPredicted RBP13.9□□□□□ -0.18
ATG4C-203ENST00000371120 BTNL9Q6UXG8 535 aa13.9□□□□□ -0.18
ATG4C-203ENST00000371120 TMEM87AQ8NBN3 555 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms