RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 SLFNL1Q499Z3 407 aa18.38■□□□□ 0.53
SS18L1-202ENST00000370848 GADL1Q6ZQY3 521 aa18.38■□□□□ 0.53
SS18L1-202ENST00000370848 MIGA1Q8NAN2 632 aa18.38■□□□□ 0.53
SS18L1-202ENST00000370848 ZNF280CQ8ND82 737 aa18.38■□□□□ 0.53
SS18L1-202ENST00000370848 WDR18Q9BV38 432 aa18.38■□□□□ 0.53
SS18L1-202ENST00000370848 GINM1Q9NU53 330 aa18.38■□□□□ 0.53
SS18L1-202ENST00000370848 PAG1Q9NWQ8 432 aa18.38■□□□□ 0.53
SS18L1-202ENST00000370848 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.38■□□□□ 0.53
SS18L1-202ENST00000370848 PI4KBQ9UBF8 816 aa18.38■□□□□ 0.53
SS18L1-202ENST00000370848 PNMA3Q9UL41 463 aa18.38■□□□□ 0.53
SS18L1-202ENST00000370848 DDX60LQ5H9U9 1706 aaKnown RBP18.37■□□□□ 0.53
SS18L1-202ENST00000370848 BAG3O95817 575 aa18.37■□□□□ 0.53
SS18L1-202ENST00000370848 TREML2Q5T2D2 321 aa18.37■□□□□ 0.53
SS18L1-202ENST00000370848 TEX11Q8IYF3 940 aa18.37■□□□□ 0.53
SS18L1-202ENST00000370848 RWDD1Q9H446 243 aaPredicted RBP18.37■□□□□ 0.53
SS18L1-202ENST00000370848 GABRQQ9UN88 632 aa18.37■□□□□ 0.53
SS18L1-202ENST00000370848 FAM196BA6NMK8 535 aa18.36■□□□□ 0.53
SS18L1-202ENST00000370848 CCL5P13501 91 aa18.36■□□□□ 0.53
SS18L1-202ENST00000370848 PDE6AP16499 860 aa18.36■□□□□ 0.53
SS18L1-202ENST00000370848 FLT1P17948 1338 aa18.36■□□□□ 0.53
SS18L1-202ENST00000370848 GCLCP48506 637 aaPredicted RBP18.36■□□□□ 0.53
SS18L1-202ENST00000370848 UBXN2AP68543 259 aa18.36■□□□□ 0.53
SS18L1-202ENST00000370848 MAP3K12Q12852 859 aa18.36■□□□□ 0.53
SS18L1-202ENST00000370848 TTF1Q15361 905 aaPredicted RBP18.36■□□□□ 0.53
SS18L1-202ENST00000370848 B4GALNT3Q6L9W6 998 aa18.36■□□□□ 0.53
SS18L1-202ENST00000370848 CCDC84Q86UT8 332 aaPredicted RBP18.36■□□□□ 0.53
SS18L1-202ENST00000370848 SALL3Q9BXA9 1300 aa18.36■□□□□ 0.53
SS18L1-202ENST00000370848 DNAJC18Q9H819 358 aa18.36■□□□□ 0.53
SS18L1-202ENST00000370848 USP17L5A8MUK1 530 aa18.35■□□□□ 0.53
SS18L1-202ENST00000370848 FLT3LGP49771 235 aa18.35■□□□□ 0.53
SS18L1-202ENST00000370848 SPP2Q13103 211 aa18.35■□□□□ 0.53
SS18L1-202ENST00000370848 CERS3Q8IU89 383 aa18.35■□□□□ 0.53
SS18L1-202ENST00000370848 SMC5Q8IY18 1101 aa18.35■□□□□ 0.53
SS18L1-202ENST00000370848 SMCR8Q8TEV9 937 aaPredicted RBP18.35■□□□□ 0.53
SS18L1-202ENST00000370848 NOL10Q9BSC4 688 aaKnown RBP18.35■□□□□ 0.53
SS18L1-202ENST00000370848 MORF4L1Q9UBU8 362 aa18.35■□□□□ 0.53
SS18L1-202ENST00000370848 DOCK3Q8IZD9 2030 aa18.35■□□□□ 0.53
SS18L1-202ENST00000370848 PLXNB2O15031 1838 aa18.35■□□□□ 0.53
SS18L1-202ENST00000370848 ZNF532Q9HCE3 1301 aa18.34■□□□□ 0.53
SS18L1-202ENST00000370848 TCRBV5S4A2TA0A5A2 114 aa18.34■□□□□ 0.53
SS18L1-202ENST00000370848 ASNSP08243 561 aa18.34■□□□□ 0.53
SS18L1-202ENST00000370848 HOXA7P31268 230 aaPredicted RBP18.34■□□□□ 0.53
SS18L1-202ENST00000370848 PABPC4Q13310 644 aaKnown RBP eCLIP18.34■□□□□ 0.53
SS18L1-202ENST00000370848 SLC9C2Q5TAH2 1124 aa18.34■□□□□ 0.53
SS18L1-202ENST00000370848 FOXP4Q8IVH2 680 aaPredicted RBP18.34■□□□□ 0.53
SS18L1-202ENST00000370848 PI4K2BQ8TCG2 481 aa18.34■□□□□ 0.53
SS18L1-202ENST00000370848 GPATCH3Q96I76 525 aa18.34■□□□□ 0.53
SS18L1-202ENST00000370848 LNPKQ9C0E8 428 aa18.34■□□□□ 0.53
SS18L1-202ENST00000370848 AS3MTQ9HBK9 375 aa18.34■□□□□ 0.53
SS18L1-202ENST00000370848 PAK6Q9NQU5 681 aaPredicted RBP18.34■□□□□ 0.53
SS18L1-202ENST00000370848 TNPO2O14787 897 aaKnown RBP18.33■□□□□ 0.52
SS18L1-202ENST00000370848 ADCY3O60266 1144 aa18.33■□□□□ 0.52
SS18L1-202ENST00000370848 MX1P20591 662 aa18.33■□□□□ 0.52
SS18L1-202ENST00000370848 MAPKAPK5Q8IW41 473 aa18.33■□□□□ 0.52
SS18L1-202ENST00000370848 U2AF1L4Q8WU68 220 aaKnown RBP18.33■□□□□ 0.52
SS18L1-202ENST00000370848 TGFBRAP1Q8WUH2 860 aa18.33■□□□□ 0.52
SS18L1-202ENST00000370848 ADD2P35612 726 aa18.32■□□□□ 0.52
SS18L1-202ENST00000370848 FXR1P51114 621 aaKnown RBP eCLIP18.32■□□□□ 0.52
SS18L1-202ENST00000370848 HMGCS2P54868 508 aa18.32■□□□□ 0.52
SS18L1-202ENST00000370848 BACE1P56817 501 aa18.32■□□□□ 0.52
SS18L1-202ENST00000370848 RIOK1Q9BRS2 568 aaKnown RBP18.32■□□□□ 0.52
SS18L1-202ENST00000370848 CRISPLD2Q9H0B8 497 aa18.32■□□□□ 0.52
SS18L1-202ENST00000370848 RNF208Q9H0X6 261 aa18.32■□□□□ 0.52
SS18L1-202ENST00000370848 ASCC2Q9H1I8 757 aaPredicted RBP18.32■□□□□ 0.52
SS18L1-202ENST00000370848 SZT2Q5T011 3432 aa18.32■□□□□ 0.52
SS18L1-202ENST00000370848 MYH1P12882 1939 aa18.31■□□□□ 0.52
SS18L1-202ENST00000370848 TTC41PQ6P2S7 1318 aa18.31■□□□□ 0.52
SS18L1-202ENST00000370848 SGPL1O95470 568 aa18.31■□□□□ 0.52
SS18L1-202ENST00000370848 MYCP01106 439 aaPredicted RBP18.31■□□□□ 0.52
SS18L1-202ENST00000370848 JAG1P78504 1218 aa18.31■□□□□ 0.52
SS18L1-202ENST00000370848 ANKRD13CQ8N6S4 541 aa18.31■□□□□ 0.52
SS18L1-202ENST00000370848 COA7Q96BR5 231 aa18.31■□□□□ 0.52
SS18L1-202ENST00000370848 UNC93B1Q9H1C4 597 aa18.31■□□□□ 0.52
SS18L1-202ENST00000370848 PRO3102Q9H379 93 aa18.31■□□□□ 0.52
SS18L1-202ENST00000370848 ZBTB47Q9UFB7 747 aaPredicted RBP18.31■□□□□ 0.52
SS18L1-202ENST00000370848 C19orf81C9J6K1 198 aa18.3■□□□□ 0.52
SS18L1-202ENST00000370848 INHAP05111 366 aa18.3■□□□□ 0.52
SS18L1-202ENST00000370848 LCORLQ8N3X6 602 aa18.3■□□□□ 0.52
SS18L1-202ENST00000370848 EHD4Q9H223 541 aa18.3■□□□□ 0.52
SS18L1-202ENST00000370848 SAP30BPQ9UHR5 308 aaKnown RBP18.3■□□□□ 0.52
SS18L1-202ENST00000370848 GJD2Q9UKL4 321 aa18.3■□□□□ 0.52
SS18L1-202ENST00000370848 COLQQ9Y215 455 aaPredicted RBP18.3■□□□□ 0.52
SS18L1-202ENST00000370848 TRIOBPQ9H2D6 2365 aa18.29■□□□□ 0.52
SS18L1-202ENST00000370848 MAGEB6P1A0A0J9YX57 407 aa18.29■□□□□ 0.52
SS18L1-202ENST00000370848 H0YGN5 161 aa18.29■□□□□ 0.52
SS18L1-202ENST00000370848 ECM2O94769 699 aaPredicted RBP18.29■□□□□ 0.52
SS18L1-202ENST00000370848 ELNP15502 786 aa18.29■□□□□ 0.52
SS18L1-202ENST00000370848 NUCB1Q02818 461 aa18.29■□□□□ 0.52
SS18L1-202ENST00000370848 TATDN1Q6P1N9 297 aa18.29■□□□□ 0.52
SS18L1-202ENST00000370848 CHD1LQ86WJ1 897 aa18.29■□□□□ 0.52
SS18L1-202ENST00000370848 HTATIP2Q9BUP3 242 aa18.29■□□□□ 0.52
SS18L1-202ENST00000370848 ZBTB21Q9ULJ3 1066 aa18.29■□□□□ 0.52
SS18L1-202ENST00000370848 GLRX3O76003 335 aaKnown RBP18.28■□□□□ 0.52
SS18L1-202ENST00000370848 PDE1AP54750 535 aa18.28■□□□□ 0.52
SS18L1-202ENST00000370848 MTMR2Q13614 643 aa18.28■□□□□ 0.52
SS18L1-202ENST00000370848 KBTBD3Q8NAB2 608 aa18.28■□□□□ 0.52
SS18L1-202ENST00000370848 C12orf42Q96LP6 360 aa18.28■□□□□ 0.52
SS18L1-202ENST00000370848 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.28■□□□□ 0.524e-6■■■■□ 22.8
SS18L1-202ENST00000370848 ARMT1Q9H993 441 aa18.28■□□□□ 0.52
SS18L1-202ENST00000370848 STAP2Q9UGK3 403 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms