RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 TMOD4Q9NZQ9 345 aa18.49■□□□□ 0.55
RPF1-202ENST00000370656 MORF4L1Q9UBU8 362 aa18.49■□□□□ 0.55
RPF1-202ENST00000370656 GNAI3P08754 354 aa18.48■□□□□ 0.55
RPF1-202ENST00000370656 TRIM27P14373 513 aa18.48■□□□□ 0.55
RPF1-202ENST00000370656 CCAR1Q8IX12 1150 aaKnown RBP18.48■□□□□ 0.55
RPF1-202ENST00000370656 SOCS4Q8WXH5 440 aa18.48■□□□□ 0.55
RPF1-202ENST00000370656 FRAT1Q92837 279 aaPredicted RBP18.48■□□□□ 0.55
RPF1-202ENST00000370656 NUDT12Q9BQG2 462 aa18.48■□□□□ 0.55
RPF1-202ENST00000370656 DHX36Q9H2U1 1008 aaKnown RBP18.48■□□□□ 0.55
RPF1-202ENST00000370656 HMG20BQ9P0W2 317 aa18.48■□□□□ 0.55
RPF1-202ENST00000370656 PI4KBQ9UBF8 816 aa18.48■□□□□ 0.55
RPF1-202ENST00000370656 OGDHLQ9ULD0 1010 aa18.48■□□□□ 0.55
RPF1-202ENST00000370656 ASNSP08243 561 aa18.47■□□□□ 0.55
RPF1-202ENST00000370656 RLBP1P12271 317 aa18.47■□□□□ 0.55
RPF1-202ENST00000370656 XRCC5P13010 732 aaKnown RBP18.47■□□□□ 0.55
RPF1-202ENST00000370656 CYP2B6P20813 491 aa18.47■□□□□ 0.55
RPF1-202ENST00000370656 LRIT3Q3SXY7 679 aa18.47■□□□□ 0.55
RPF1-202ENST00000370656 Q7L0L9 218 aa18.47■□□□□ 0.55
RPF1-202ENST00000370656 TDHQ8IZJ6 230 aa18.47■□□□□ 0.55
RPF1-202ENST00000370656 GPRC5AQ8NFJ5 357 aa18.47■□□□□ 0.55
RPF1-202ENST00000370656 ZNF384Q8TF68 577 aa18.47■□□□□ 0.55
RPF1-202ENST00000370656 TRIB2Q92519 343 aa18.47■□□□□ 0.55
RPF1-202ENST00000370656 MEIS3Q99687 375 aa18.47■□□□□ 0.55
RPF1-202ENST00000370656 WDR18Q9BV38 432 aa18.47■□□□□ 0.55
RPF1-202ENST00000370656 TRIM34Q9BYJ4 488 aa18.47■□□□□ 0.55
RPF1-202ENST00000370656 LRP2BPQ9P2M1 347 aa18.47■□□□□ 0.55
RPF1-202ENST00000370656 C19orf81C9J6K1 198 aa18.46■□□□□ 0.55
RPF1-202ENST00000370656 BAG3O95817 575 aa18.46■□□□□ 0.55
RPF1-202ENST00000370656 PRKAR2AP13861 404 aaKnown RBP18.46■□□□□ 0.55
RPF1-202ENST00000370656 PLCG2P16885 1265 aa18.46■□□□□ 0.55
RPF1-202ENST00000370656 SYN1P17600 705 aa18.46■□□□□ 0.55
RPF1-202ENST00000370656 HOXA7P31268 230 aaPredicted RBP18.46■□□□□ 0.55
RPF1-202ENST00000370656 MAGEA10P43363 369 aaPredicted RBP18.46■□□□□ 0.55
RPF1-202ENST00000370656 BACE1P56817 501 aa18.46■□□□□ 0.55
RPF1-202ENST00000370656 TRIM32Q13049 653 aa18.46■□□□□ 0.55
RPF1-202ENST00000370656 MTMR2Q13614 643 aa18.46■□□□□ 0.55
RPF1-202ENST00000370656 TBC1D9Q6ZT07 1266 aa18.46■□□□□ 0.55
RPF1-202ENST00000370656 PANK1Q8TE04 598 aa18.46■□□□□ 0.55
RPF1-202ENST00000370656 DNAH12Q6ZR08 3092 aa18.45■□□□□ 0.54
RPF1-202ENST00000370656 UQCRFS1P1P0C7P4 283 aa18.45■□□□□ 0.54
RPF1-202ENST00000370656 ARID4AP29374 1257 aaPredicted RBP18.45■□□□□ 0.54
RPF1-202ENST00000370656 MAPK4P31152 587 aa18.45■□□□□ 0.54
RPF1-202ENST00000370656 MTX1Q13505 466 aa18.45■□□□□ 0.54
RPF1-202ENST00000370656 MAP3K21Q5TCX8 1036 aa18.45■□□□□ 0.54
RPF1-202ENST00000370656 GTF3C2Q8WUA4 911 aaPredicted RBP18.45■□□□□ 0.54
RPF1-202ENST00000370656 UBE2OQ9C0C9 1292 aaKnown RBP18.45■□□□□ 0.54
RPF1-202ENST00000370656 GINM1Q9NU53 330 aa18.45■□□□□ 0.54
RPF1-202ENST00000370656 ZKSCAN1P17029 563 aaPredicted RBP18.44■□□□□ 0.54
RPF1-202ENST00000370656 HERVK_113P62684 666 aa18.44■□□□□ 0.54
RPF1-202ENST00000370656 RRP1BQ14684 758 aaKnown RBP18.44■□□□□ 0.54
RPF1-202ENST00000370656 PI16Q6UXB8 463 aa18.44■□□□□ 0.54
RPF1-202ENST00000370656 CRACR2BQ8N4Y2 399 aaPredicted RBP18.44■□□□□ 0.54
RPF1-202ENST00000370656 P2RX7Q99572 595 aaKnown RBP18.44■□□□□ 0.54
RPF1-202ENST00000370656 TNNQ9UQP3 1299 aa18.44■□□□□ 0.54
RPF1-202ENST00000370656 STXBP5LQ9Y2K9 1186 aa18.44■□□□□ 0.54
RPF1-202ENST00000370656 CDK5RAP2Q96SN8 1893 aa18.43■□□□□ 0.54
RPF1-202ENST00000370656 MAST2Q6P0Q8 1798 aa18.43■□□□□ 0.54
RPF1-202ENST00000370656 USP17L10C9JJH3 530 aa18.43■□□□□ 0.54
RPF1-202ENST00000370656 G3BP1Q13283 466 aaKnown RBP eCLIP18.43■□□□□ 0.54
RPF1-202ENST00000370656 NAA16Q6N069 864 aaPredicted RBP18.43■□□□□ 0.54
RPF1-202ENST00000370656 FOXP4Q8IVH2 680 aaPredicted RBP18.43■□□□□ 0.54
RPF1-202ENST00000370656 SH3RF3Q8TEJ3 882 aaPredicted RBP18.43■□□□□ 0.54
RPF1-202ENST00000370656 CWC22Q9HCG8 908 aaKnown RBP18.43■□□□□ 0.54
RPF1-202ENST00000370656 FOCADQ5VW36 1801 aa18.43■□□□□ 0.54
RPF1-202ENST00000370656 SIPA1L1O43166 1804 aa18.42■□□□□ 0.54
RPF1-202ENST00000370656 RGS2P41220 211 aa18.42■□□□□ 0.54
RPF1-202ENST00000370656 POLA2Q14181 598 aa18.42■□□□□ 0.54
RPF1-202ENST00000370656 AATFQ9NY61 560 aaKnown RBP eCLIP18.42■□□□□ 0.54
RPF1-202ENST00000370656 LAMA2P24043 3122 aaKnown RBP18.42■□□□□ 0.54
RPF1-202ENST00000370656 UNC80Q8N2C7 3258 aa18.41■□□□□ 0.54
RPF1-202ENST00000370656 MCAMP43121 646 aa18.41■□□□□ 0.54
RPF1-202ENST00000370656 ERVK-9P63128 1117 aa18.41■□□□□ 0.54
RPF1-202ENST00000370656 ERVK-24P63145 666 aa18.41■□□□□ 0.54
RPF1-202ENST00000370656 CACNB2Q08289 660 aaPredicted RBP18.41■□□□□ 0.54
RPF1-202ENST00000370656 COG6Q9Y2V7 657 aa18.41■□□□□ 0.54
RPF1-202ENST00000370656 PFASO15067 1338 aa18.41■□□□□ 0.54
RPF1-202ENST00000370656 GLRX3O76003 335 aaKnown RBP18.4■□□□□ 0.54
RPF1-202ENST00000370656 HLA-DOAP06340 250 aa18.4■□□□□ 0.54
RPF1-202ENST00000370656 PLEKHH3Q7Z736 793 aa18.4■□□□□ 0.54
RPF1-202ENST00000370656 TGFBRAP1Q8WUH2 860 aa18.4■□□□□ 0.54
RPF1-202ENST00000370656 APBA2Q99767 749 aa18.4■□□□□ 0.54
RPF1-202ENST00000370656 TXNRD2Q9NNW7 524 aa18.4■□□□□ 0.54
RPF1-202ENST00000370656 MTMR10Q9NXD2 777 aa18.4■□□□□ 0.54
RPF1-202ENST00000370656 RBPJLQ9UBG7 517 aa18.4■□□□□ 0.54
RPF1-202ENST00000370656 DDX19BQ9UMR2 479 aa18.4■□□□□ 0.54
RPF1-202ENST00000370656 IGSF3O75054 1194 aa18.39■□□□□ 0.53
RPF1-202ENST00000370656 GNAI2P04899 355 aa18.39■□□□□ 0.53
RPF1-202ENST00000370656 COL6A1P12109 1028 aa18.39■□□□□ 0.53
RPF1-202ENST00000370656 PPP4CP60510 307 aa18.39■□□□□ 0.53
RPF1-202ENST00000370656 CCNA1P78396 465 aa18.39■□□□□ 0.53
RPF1-202ENST00000370656 B4GALNT3Q6L9W6 998 aa18.39■□□□□ 0.53
RPF1-202ENST00000370656 USP17L2Q6R6M4 530 aa18.39■□□□□ 0.53
RPF1-202ENST00000370656 GPR142Q7Z601 462 aa18.39■□□□□ 0.53
RPF1-202ENST00000370656 METTL16Q86W50 562 aaKnown RBP18.39■□□□□ 0.53
RPF1-202ENST00000370656 MAPKAPK5Q8IW41 473 aa18.39■□□□□ 0.53
RPF1-202ENST00000370656 FTSJ3Q8IY81 847 aaKnown RBP18.39■□□□□ 0.53
RPF1-202ENST00000370656 CCDC136Q96JN2 1154 aa18.39■□□□□ 0.53
RPF1-202ENST00000370656 PAGR1Q9BTK6 254 aa18.39■□□□□ 0.53
RPF1-202ENST00000370656 COL25A1Q9BXS0 654 aaPredicted RBP18.39■□□□□ 0.53
RPF1-202ENST00000370656 ZBTB21Q9ULJ3 1066 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms