RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 A1BGP04217 495 aa20.01■□□□□ 0.79
CHUK-201ENST00000370397 GYPCP04921 128 aa20.01■□□□□ 0.79
CHUK-201ENST00000370397 LIFRP42702 1097 aa20.01■□□□□ 0.79
CHUK-201ENST00000370397 ABCB6Q9NP58 842 aa20.01■□□□□ 0.79
CHUK-201ENST00000370397 PIH1D3Q9NQM4 214 aaKnown RBP20.01■□□□□ 0.79
CHUK-201ENST00000370397 RNF225M0QZC1 329 aaPredicted RBP20.01■□□□□ 0.79
CHUK-201ENST00000370397 MFAP3LO75121 409 aa20.01■□□□□ 0.79
CHUK-201ENST00000370397 KRT28Q7Z3Y7 464 aa20.01■□□□□ 0.79
CHUK-201ENST00000370397 NAA15Q9BXJ9 866 aaKnown RBP20.01■□□□□ 0.79
CHUK-201ENST00000370397 EPB41L4AQ9HCS5 686 aaPredicted RBP20.01■□□□□ 0.79
CHUK-201ENST00000370397 RIPOR2Q9Y4F9 1068 aa20.01■□□□□ 0.79
CHUK-201ENST00000370397 SRPRBQ9Y5M8 271 aaKnown RBP20.01■□□□□ 0.79
CHUK-201ENST00000370397 FOXR1Q6PIV2 292 aa20.01■□□□□ 0.79
CHUK-201ENST00000370397 LZTFL1Q9NQ48 299 aa20.01■□□□□ 0.79
CHUK-201ENST00000370397 NLRP2Q9NX02 1062 aa20.01■□□□□ 0.79
CHUK-201ENST00000370397 ZBTB43O43298 467 aa20■□□□□ 0.79
CHUK-201ENST00000370397 IFNAR1P17181 557 aa20■□□□□ 0.79
CHUK-201ENST00000370397 IARSP41252 1262 aaKnown RBP20■□□□□ 0.79
CHUK-201ENST00000370397 STRN4Q9NRL3 753 aa20■□□□□ 0.79
CHUK-201ENST00000370397 NOP2P46087 812 aaKnown RBP20■□□□□ 0.79
CHUK-201ENST00000370397 VSNL1P62760 191 aa20■□□□□ 0.79
CHUK-201ENST00000370397 DPYDQ12882 1025 aa20■□□□□ 0.79
CHUK-201ENST00000370397 GNL2Q13823 731 aaKnown RBP20■□□□□ 0.79
CHUK-201ENST00000370397 IPO4Q8TEX9 1081 aaKnown RBP20■□□□□ 0.79
CHUK-201ENST00000370397 FXR1P51114 621 aaKnown RBP eCLIP20■□□□□ 0.79
CHUK-201ENST00000370397 ERVK-24P63145 666 aa20■□□□□ 0.79
CHUK-201ENST00000370397 AKAP2Q9Y2D5 859 aa20■□□□□ 0.79
CHUK-201ENST00000370397 FOXP1Q9H334 677 aaPredicted RBP19.99■□□□□ 0.79
CHUK-201ENST00000370397 ZBTB3Q9H5J0 574 aa19.99■□□□□ 0.79
CHUK-201ENST00000370397 ZSWIM4Q9H7M6 989 aa19.99■□□□□ 0.79
CHUK-201ENST00000370397 WWC2Q6AWC2 1192 aa19.99■□□□□ 0.79
CHUK-201ENST00000370397 ZSWIM5Q9P217 1185 aa19.99■□□□□ 0.79
CHUK-201ENST00000370397 PUF60Q9UHX1 559 aaKnown RBP19.99■□□□□ 0.79
CHUK-201ENST00000370397 ITIH6Q6UXX5 1313 aa19.99■□□□□ 0.79
CHUK-201ENST00000370397 GPS2Q13227 327 aa19.99■□□□□ 0.79
CHUK-201ENST00000370397 UBE3CQ15386 1083 aa19.99■□□□□ 0.79
CHUK-201ENST00000370397 ALX1Q15699 326 aa19.99■□□□□ 0.79
CHUK-201ENST00000370397 PPP1R3GB7ZBB8 358 aa19.98■□□□□ 0.79
CHUK-201ENST00000370397 CT47A1Q5JQC4 288 aaPredicted RBP19.98■□□□□ 0.79
CHUK-201ENST00000370397 LMAN1P49257 510 aa19.98■□□□□ 0.79
CHUK-201ENST00000370397 DIS3L2Q8IYB7 885 aaKnown RBP19.98■□□□□ 0.79
CHUK-201ENST00000370397 KCNJ14Q9UNX9 436 aa19.98■□□□□ 0.79
CHUK-201ENST00000370397 NR5A1Q13285 461 aa19.97■□□□□ 0.79
CHUK-201ENST00000370397 HDXQ7Z353 690 aa19.97■□□□□ 0.79
CHUK-201ENST00000370397 CEP112Q8N8E3 955 aa19.97■□□□□ 0.79
CHUK-201ENST00000370397 STRBPQ96SI9 672 aaKnown RBP19.97■□□□□ 0.79
CHUK-201ENST00000370397 CSRNP2Q9H175 543 aa19.97■□□□□ 0.79
CHUK-201ENST00000370397 RRP15Q9Y3B9 282 aaKnown RBP19.97■□□□□ 0.79
CHUK-201ENST00000370397 LRRIQ3A6PVS8 624 aaPredicted RBP19.97■□□□□ 0.79
CHUK-201ENST00000370397 CABP4P57796 275 aa19.97■□□□□ 0.79
CHUK-201ENST00000370397 SPATA1Q5VX52 437 aa19.97■□□□□ 0.79
CHUK-201ENST00000370397 OXER1Q8TDS5 423 aa19.97■□□□□ 0.79
CHUK-201ENST00000370397 CDK11BP21127 795 aaKnown RBP19.97■□□□□ 0.79
CHUK-201ENST00000370397 IGSF22Q8N9C0 903 aa19.97■□□□□ 0.79
CHUK-201ENST00000370397 NOA1Q8NC60 698 aaKnown RBP19.97■□□□□ 0.79
CHUK-201ENST00000370397 SLC26A6Q9BXS9 759 aa19.97■□□□□ 0.79
CHUK-201ENST00000370397 GOLGA8AA7E2F4 631 aa19.96■□□□□ 0.79
CHUK-201ENST00000370397 SLC35F6Q8N357 371 aa19.96■□□□□ 0.79
CHUK-201ENST00000370397 AK7Q96M32 723 aa19.96■□□□□ 0.79
CHUK-201ENST00000370397 CDC5LQ99459 802 aaKnown RBP19.96■□□□□ 0.79
CHUK-201ENST00000370397 RASSF4Q9H2L5 321 aa19.96■□□□□ 0.79
CHUK-201ENST00000370397 DACH1Q9UI36 760 aa19.96■□□□□ 0.79
CHUK-201ENST00000370397 FAN1Q9Y2M0 1017 aa19.96■□□□□ 0.79
CHUK-201ENST00000370397 LRRC10BA6NIK2 292 aa19.96■□□□□ 0.79
CHUK-201ENST00000370397 WNT7AO00755 349 aa19.96■□□□□ 0.79
CHUK-201ENST00000370397 CASP14P31944 242 aa19.96■□□□□ 0.79
CHUK-201ENST00000370397 TRIM28Q13263 835 aaKnown RBP19.96■□□□□ 0.79
CHUK-201ENST00000370397 WWC3Q9ULE0 1092 aa19.96■□□□□ 0.79
CHUK-201ENST00000370397 REXO2Q9Y3B8 237 aaKnown RBP19.96■□□□□ 0.79
CHUK-201ENST00000370397 DCCP43146 1447 aa19.96■□□□□ 0.79
CHUK-201ENST00000370397 TNS3Q68CZ2 1445 aa19.96■□□□□ 0.79
CHUK-201ENST00000370397 TUBB2AQ13885 445 aa19.96■□□□□ 0.79
CHUK-201ENST00000370397 RILPL1Q5EBL4 403 aa19.96■□□□□ 0.79
CHUK-201ENST00000370397 WDR93Q6P2C0 686 aa19.96■□□□□ 0.79
CHUK-201ENST00000370397 TUBB2BQ9BVA1 445 aa19.96■□□□□ 0.79
CHUK-201ENST00000370397 VPS18Q9P253 973 aa19.96■□□□□ 0.79
CHUK-201ENST00000370397 ZNF532Q9HCE3 1301 aa19.96■□□□□ 0.79
CHUK-201ENST00000370397 SEMA3EO15041 775 aa19.95■□□□□ 0.78
CHUK-201ENST00000370397 CASP8Q14790 479 aa19.95■□□□□ 0.78
CHUK-201ENST00000370397 EARS2Q5JPH6 523 aaKnown RBP19.95■□□□□ 0.78
CHUK-201ENST00000370397 ACRBPQ8NEB7 543 aa19.95■□□□□ 0.78
CHUK-201ENST00000370397 PRPF6O94906 941 aaKnown RBP19.95■□□□□ 0.78
CHUK-201ENST00000370397 DISP2A7MBM2 1401 aa19.95■□□□□ 0.78
CHUK-201ENST00000370397 CASP1P29466 404 aa19.95■□□□□ 0.78
CHUK-201ENST00000370397 TRDNQ13061 729 aa19.95■□□□□ 0.78
CHUK-201ENST00000370397 CCDC57Q2TAC2 916 aa19.95■□□□□ 0.78
CHUK-201ENST00000370397 SPATA31A3Q5VYP0 1347 aa19.94■□□□□ 0.78
CHUK-201ENST00000370397 SSRP1Q08945 709 aaKnown RBP19.94■□□□□ 0.78
CHUK-201ENST00000370397 MCM6Q14566 821 aa19.94■□□□□ 0.78
CHUK-201ENST00000370397 ZNF569Q5MCW4 686 aa19.94■□□□□ 0.78
CHUK-201ENST00000370397 LMOD2Q6P5Q4 547 aa19.94■□□□□ 0.78
CHUK-201ENST00000370397 AATFQ9NY61 560 aaKnown RBP eCLIP19.94■□□□□ 0.78
CHUK-201ENST00000370397 POTEB2H3BUK9 544 aa19.94■□□□□ 0.78
CHUK-201ENST00000370397 PDE6AP16499 860 aa19.94■□□□□ 0.78
CHUK-201ENST00000370397 ARID4AP29374 1257 aaPredicted RBP19.94■□□□□ 0.78
CHUK-201ENST00000370397 HOOK1Q9UJC3 728 aaKnown RBP19.94■□□□□ 0.78
CHUK-201ENST00000370397 SYNRGQ9UMZ2 1314 aa19.94■□□□□ 0.78
CHUK-201ENST00000370397 SLIT2O94813 1529 aa19.94■□□□□ 0.78
CHUK-201ENST00000370397 SYF2O95926 243 aaKnown RBP19.94■□□□□ 0.78
CHUK-201ENST00000370397 AARSP49588 968 aaKnown RBP eCLIP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms