RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 MTUS1Q9ULD2 1270 aa9.54□□□□□ -0.88
ABCA4-201ENST00000370225 BCAMP50895 628 aa9.54□□□□□ -0.88
ABCA4-201ENST00000370225 TMEM87BQ96K49 555 aa9.54□□□□□ -0.88
ABCA4-201ENST00000370225 TRIM31Q9BZY9 425 aa9.54□□□□□ -0.88
ABCA4-201ENST00000370225 SPC25Q9HBM1 224 aa9.54□□□□□ -0.88
ABCA4-201ENST00000370225 ZBTB40Q9NUA8 1239 aa9.54□□□□□ -0.88
ABCA4-201ENST00000370225 LRWD1Q9UFC0 647 aa9.54□□□□□ -0.88
ABCA4-201ENST00000370225 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.54□□□□□ -0.88
ABCA4-201ENST00000370225 ABCC10Q5T3U5 1492 aa9.54□□□□□ -0.88
ABCA4-201ENST00000370225 GOLGA8HP0CJ92 632 aa9.54□□□□□ -0.88
ABCA4-201ENST00000370225 TNNI1P19237 187 aa9.54□□□□□ -0.88
ABCA4-201ENST00000370225 IL13P35225 146 aa9.54□□□□□ -0.88
ABCA4-201ENST00000370225 CSGALNACT2Q8N6G5 542 aa9.54□□□□□ -0.88
ABCA4-201ENST00000370225 SEC62Q99442 399 aaKnown RBP9.54□□□□□ -0.88
ABCA4-201ENST00000370225 ARFGAP3Q9NP61 516 aa9.54□□□□□ -0.88
ABCA4-201ENST00000370225 KCNQ3O43525 872 aa9.54□□□□□ -0.88
ABCA4-201ENST00000370225 NOLC1Q14978 699 aaKnown RBP eCLIP9.54□□□□□ -0.88
ABCA4-201ENST00000370225 Q3C1V9 767 aa9.54□□□□□ -0.88
ABCA4-201ENST00000370225 USP26Q9BXU7 913 aa9.54□□□□□ -0.88
ABCA4-201ENST00000370225 RSPH14Q9UHP6 348 aa9.54□□□□□ -0.88
ABCA4-201ENST00000370225 ARHGAP44Q17R89 818 aa9.53□□□□□ -0.88
ABCA4-201ENST00000370225 LIN9Q5TKA1 542 aa9.53□□□□□ -0.88
ABCA4-201ENST00000370225 SMC6Q96SB8 1091 aa9.53□□□□□ -0.88
ABCA4-201ENST00000370225 KCNH3Q9ULD8 1083 aa9.53□□□□□ -0.88
ABCA4-201ENST00000370225 EXOC3O60645 756 aa9.53□□□□□ -0.88
ABCA4-201ENST00000370225 ZWINTO95229 277 aa9.53□□□□□ -0.88
ABCA4-201ENST00000370225 ARID4AP29374 1257 aaPredicted RBP9.53□□□□□ -0.88
ABCA4-201ENST00000370225 CALCOCO2Q13137 446 aa9.53□□□□□ -0.88
ABCA4-201ENST00000370225 NLRX1Q86UT6 975 aa9.53□□□□□ -0.88
ABCA4-201ENST00000370225 SULF1Q8IWU6 871 aa9.53□□□□□ -0.88
ABCA4-201ENST00000370225 ANO1Q5XXA6 986 aa9.53□□□□□ -0.88
ABCA4-201ENST00000370225 CASC4Q6P4E1 433 aa9.53□□□□□ -0.88
ABCA4-201ENST00000370225 DIS3L2Q8IYB7 885 aaKnown RBP9.53□□□□□ -0.88
ABCA4-201ENST00000370225 PSMB7Q99436 277 aa9.53□□□□□ -0.88
ABCA4-201ENST00000370225 TRIM7Q9C029 511 aa9.53□□□□□ -0.88
ABCA4-201ENST00000370225 STMN4Q9H169 189 aaPredicted RBP9.53□□□□□ -0.88
ABCA4-201ENST00000370225 PLEKHA4Q9H4M7 779 aa9.53□□□□□ -0.88
ABCA4-201ENST00000370225 COL17A1Q9UMD9 1497 aaPredicted RBP9.53□□□□□ -0.88
ABCA4-201ENST00000370225 BIVM-ERCC5R4GMW8 1640 aa9.53□□□□□ -0.88
ABCA4-201ENST00000370225 AKR1B15C9JRZ8 316 aaPredicted RBP9.53□□□□□ -0.88
ABCA4-201ENST00000370225 NONOQ15233 471 aaKnown RBP eCLIP9.53□□□□□ -0.88
ABCA4-201ENST00000370225 BSPRYQ5W0U4 402 aa9.53□□□□□ -0.88
ABCA4-201ENST00000370225 DCUN1D2Q6PH85 259 aa9.53□□□□□ -0.88
ABCA4-201ENST00000370225 KIAA1524Q8TCG1 905 aa9.53□□□□□ -0.88
ABCA4-201ENST00000370225 AS3MTQ9HBK9 375 aa9.53□□□□□ -0.88
ABCA4-201ENST00000370225 POLR3AO14802 1390 aaPredicted RBP9.53□□□□□ -0.88
ABCA4-201ENST00000370225 SYNRGQ9UMZ2 1314 aa9.53□□□□□ -0.88
ABCA4-201ENST00000370225 TSGA10Q9BZW7 698 aa9.53□□□□□ -0.88
ABCA4-201ENST00000370225 THRAP3Q9Y2W1 955 aaKnown RBP9.53□□□□□ -0.88
ABCA4-201ENST00000370225 TBX22Q9Y458 520 aa9.53□□□□□ -0.88
ABCA4-201ENST00000370225 RPS8P62241 208 aaKnown RBP9.52□□□□□ -0.88
ABCA4-201ENST00000370225 CARD10Q9BWT7 1032 aa9.52□□□□□ -0.88
ABCA4-201ENST00000370225 GAS7O60861 476 aa9.52□□□□□ -0.88
ABCA4-201ENST00000370225 SEC24BO95487 1268 aa9.52□□□□□ -0.88
ABCA4-201ENST00000370225 USPL1Q5W0Q7 1092 aa9.52□□□□□ -0.88
ABCA4-201ENST00000370225 IGSF22Q8N9C0 903 aa9.52□□□□□ -0.88
ABCA4-201ENST00000370225 APOL6Q9BWW8 343 aa9.52□□□□□ -0.88
ABCA4-201ENST00000370225 ST7Q9NRC1 585 aa9.52□□□□□ -0.88
ABCA4-201ENST00000370225 MTRF1LQ9UGC7 380 aaKnown RBP9.52□□□□□ -0.88
ABCA4-201ENST00000370225 ATF5Q9Y2D1 282 aaPredicted RBP9.52□□□□□ -0.88
ABCA4-201ENST00000370225 SNX14Q9Y5W7 946 aa9.52□□□□□ -0.88
ABCA4-201ENST00000370225 HGSO14964 777 aaPredicted RBP9.52□□□□□ -0.89
ABCA4-201ENST00000370225 HSPA4P34932 840 aa9.52□□□□□ -0.89
ABCA4-201ENST00000370225 CYP2J2P51589 502 aa9.52□□□□□ -0.89
ABCA4-201ENST00000370225 PPARAQ07869 468 aa9.52□□□□□ -0.89
ABCA4-201ENST00000370225 PRR16Q569H4 304 aa9.52□□□□□ -0.89
ABCA4-201ENST00000370225 TTLL7Q6ZT98 887 aa9.52□□□□□ -0.89
ABCA4-201ENST00000370225 MIER3Q7Z3K6 550 aa9.52□□□□□ -0.89
ABCA4-201ENST00000370225 ANKRD35Q8N283 1001 aa9.52□□□□□ -0.89
ABCA4-201ENST00000370225 RIOK1Q9BRS2 568 aaKnown RBP9.52□□□□□ -0.89
ABCA4-201ENST00000370225 SUGCTQ9HAC7 445 aa9.52□□□□□ -0.89
ABCA4-201ENST00000370225 RAD50Q92878 1312 aa9.52□□□□□ -0.89
ABCA4-201ENST00000370225 ARHGEF10O15013 1369 aa9.52□□□□□ -0.89
ABCA4-201ENST00000370225 ZBTB7BO15156 539 aaPredicted RBP9.52□□□□□ -0.89
ABCA4-201ENST00000370225 YARSP54577 528 aaKnown RBP9.52□□□□□ -0.89
ABCA4-201ENST00000370225 FAM160A1Q05DH4 1040 aa9.52□□□□□ -0.89
ABCA4-201ENST00000370225 RILPL1Q5EBL4 403 aa9.52□□□□□ -0.89
ABCA4-201ENST00000370225 GPATCH11Q8N954 259 aa9.52□□□□□ -0.89
ABCA4-201ENST00000370225 MMS19Q96T76 1030 aa9.52□□□□□ -0.89
ABCA4-201ENST00000370225 BAG1Q99933 345 aaPredicted RBP9.52□□□□□ -0.89
ABCA4-201ENST00000370225 UNC13AQ9UPW8 1703 aa9.52□□□□□ -0.89
ABCA4-201ENST00000370225 SMCO2A6NFE2 343 aa9.52□□□□□ -0.89
ABCA4-201ENST00000370225 OPA1O60313 960 aa9.52□□□□□ -0.89
ABCA4-201ENST00000370225 CABP7Q86V35 215 aa9.52□□□□□ -0.89
ABCA4-201ENST00000370225 VPS18Q9P253 973 aa9.52□□□□□ -0.89
ABCA4-201ENST00000370225 ANAPC4Q9UJX5 808 aa9.52□□□□□ -0.89
ABCA4-201ENST00000370225 SF3A3Q12874 501 aaKnown RBP eCLIP9.52□□□□□ -0.89
ABCA4-201ENST00000370225 TBC1D10BQ4KMP7 808 aaPredicted RBP9.52□□□□□ -0.89
ABCA4-201ENST00000370225 SPICE1Q8N0Z3 855 aa9.52□□□□□ -0.89
ABCA4-201ENST00000370225 DKC1O60832 514 aaKnown RBP eCLIP9.51□□□□□ -0.89
ABCA4-201ENST00000370225 KIAA0556O60303 1618 aa9.51□□□□□ -0.89
ABCA4-201ENST00000370225 STK10O94804 968 aaKnown RBP9.51□□□□□ -0.89
ABCA4-201ENST00000370225 DEPTORQ8TB45 409 aa9.51□□□□□ -0.89
ABCA4-201ENST00000370225 USP17L12C9JPN9 530 aa9.51□□□□□ -0.89
ABCA4-201ENST00000370225 USP17L21D6R901 530 aa9.51□□□□□ -0.89
ABCA4-201ENST00000370225 CETN3O15182 167 aa9.51□□□□□ -0.89
ABCA4-201ENST00000370225 FLOT1O75955 427 aa9.51□□□□□ -0.89
ABCA4-201ENST00000370225 HSPA1LP34931 641 aa9.51□□□□□ -0.89
ABCA4-201ENST00000370225 C8orf34Q49A92 452 aa9.51□□□□□ -0.89
ABCA4-201ENST00000370225 CERKLQ49MI3 558 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms