RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 RBPJLQ9UBG7 517 aa19.03■□□□□ 0.64
SSR4-204ENST00000370087 SPTBN5Q9NRC6 3674 aaKnown RBP19.03■□□□□ 0.64
SSR4-204ENST00000370087 XRCC5P13010 732 aaKnown RBP19.02■□□□□ 0.64
SSR4-204ENST00000370087 ZKSCAN1P17029 563 aaPredicted RBP19.02■□□□□ 0.64
SSR4-204ENST00000370087 HOXA7P31268 230 aaPredicted RBP19.02■□□□□ 0.64
SSR4-204ENST00000370087 MCAMP43121 646 aa19.02■□□□□ 0.64
SSR4-204ENST00000370087 SOCS4Q8WXH5 440 aa19.02■□□□□ 0.64
SSR4-204ENST00000370087 NEUROD6Q96NK8 337 aa19.02■□□□□ 0.64
SSR4-204ENST00000370087 AS3MTQ9HBK9 375 aa19.02■□□□□ 0.64
SSR4-204ENST00000370087 RAI14Q9P0K7 980 aa19.02■□□□□ 0.64
SSR4-204ENST00000370087 HERC5Q9UII4 1024 aaKnown RBP19.02■□□□□ 0.64
SSR4-204ENST00000370087 SRGAP3O43295 1099 aa19.01■□□□□ 0.63
SSR4-204ENST00000370087 GDF11O95390 407 aa19.01■□□□□ 0.63
SSR4-204ENST00000370087 MAP4K4O95819 1239 aaPredicted RBP19.01■□□□□ 0.63
SSR4-204ENST00000370087 ARID4AP29374 1257 aaPredicted RBP19.01■□□□□ 0.63
SSR4-204ENST00000370087 GSTO1P78417 241 aa19.01■□□□□ 0.63
SSR4-204ENST00000370087 MORN1Q5T089 497 aa19.01■□□□□ 0.63
SSR4-204ENST00000370087 GPRC5AQ8NFJ5 357 aa19.01■□□□□ 0.63
SSR4-204ENST00000370087 GUCD1Q96NT3 240 aa19.01■□□□□ 0.63
SSR4-204ENST00000370087 AKAP2Q9Y2D5 859 aa19.01■□□□□ 0.63
SSR4-204ENST00000370087 CDH23Q9H251 3354 aa19.01■□□□□ 0.63
SSR4-204ENST00000370087 LDHCP07864 332 aa19■□□□□ 0.63
SSR4-204ENST00000370087 ERVK-9P63128 1117 aa19■□□□□ 0.63
SSR4-204ENST00000370087 ERVK-24P63145 666 aa19■□□□□ 0.63
SSR4-204ENST00000370087 GPR142Q7Z601 462 aa19■□□□□ 0.63
SSR4-204ENST00000370087 ADGRA1Q86SQ6 560 aa19■□□□□ 0.63
SSR4-204ENST00000370087 AATFQ9NY61 560 aaKnown RBP eCLIP19■□□□□ 0.63
SSR4-204ENST00000370087 TMOD4Q9NZQ9 345 aa19■□□□□ 0.63
SSR4-204ENST00000370087 MYH1P12882 1939 aa19■□□□□ 0.63
SSR4-204ENST00000370087 FLT1P17948 1338 aa19■□□□□ 0.63
SSR4-204ENST00000370087 MAPKAPK5Q8IW41 473 aa18.99■□□□□ 0.63
SSR4-204ENST00000370087 PAGR1Q9BTK6 254 aa18.99■□□□□ 0.63
SSR4-204ENST00000370087 PI4KBQ9UBF8 816 aa18.99■□□□□ 0.63
SSR4-204ENST00000370087 ZBTB21Q9ULJ3 1066 aa18.99■□□□□ 0.63
SSR4-204ENST00000370087 CNMDO75829 334 aa18.98■□□□□ 0.63
SSR4-204ENST00000370087 ASNSP08243 561 aa18.98■□□□□ 0.63
SSR4-204ENST00000370087 MAPK4P31152 587 aa18.98■□□□□ 0.63
SSR4-204ENST00000370087 MTX1Q13505 466 aa18.98■□□□□ 0.63
SSR4-204ENST00000370087 PDE3AQ14432 1141 aa18.98■□□□□ 0.63
SSR4-204ENST00000370087 METTL16Q86W50 562 aaKnown RBP18.98■□□□□ 0.63
SSR4-204ENST00000370087 TRMT2AQ8IZ69 625 aaKnown RBP18.98■□□□□ 0.63
SSR4-204ENST00000370087 TGFBRAP1Q8WUH2 860 aa18.98■□□□□ 0.63
SSR4-204ENST00000370087 APBA2Q99767 749 aa18.98■□□□□ 0.63
SSR4-204ENST00000370087 EMILIN3Q9NT22 766 aa18.98■□□□□ 0.63
SSR4-204ENST00000370087 FLRT1Q9NZU1 646 aa18.98■□□□□ 0.63
SSR4-204ENST00000370087 RLFQ13129 1914 aa18.98■□□□□ 0.63
SSR4-204ENST00000370087 PRUNE2Q8WUY3 3088 aa18.97■□□□□ 0.63
SSR4-204ENST00000370087 RGS2P41220 211 aa18.97■□□□□ 0.63
SSR4-204ENST00000370087 PLEKHH3Q7Z736 793 aa18.97■□□□□ 0.63
SSR4-204ENST00000370087 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.97■□□□□ 0.63
SSR4-204ENST00000370087 FAM161BQ96MY7 647 aa18.97■□□□□ 0.63
SSR4-204ENST00000370087 API5Q9BZZ5 524 aaKnown RBP18.97■□□□□ 0.63
SSR4-204ENST00000370087 SNRKQ9NRH2 765 aa18.97■□□□□ 0.63
SSR4-204ENST00000370087 NDUFB9Q9Y6M9 179 aa18.97■□□□□ 0.63
SSR4-204ENST00000370087 USP17L10C9JJH3 530 aa18.96■□□□□ 0.63
SSR4-204ENST00000370087 POTEB2H3BUK9 544 aa18.96■□□□□ 0.63
SSR4-204ENST00000370087 GORABQ5T7V8 394 aa18.96■□□□□ 0.63
SSR4-204ENST00000370087 TRMT44Q8IYL2 757 aaKnown RBP18.96■□□□□ 0.63
SSR4-204ENST00000370087 DHX36Q9H2U1 1008 aaKnown RBP18.96■□□□□ 0.63
SSR4-204ENST00000370087 LRP2BPQ9P2M1 347 aa18.96■□□□□ 0.63
SSR4-204ENST00000370087 SAP30BPQ9UHR5 308 aaKnown RBP18.96■□□□□ 0.63
SSR4-204ENST00000370087 PALD1Q9ULE6 856 aa18.96■□□□□ 0.63
SSR4-204ENST00000370087 C19orf81C9J6K1 198 aa18.95■□□□□ 0.62
SSR4-204ENST00000370087 TNNQ9UQP3 1299 aa18.95■□□□□ 0.62
SSR4-204ENST00000370087 PNMA6EA0A0J9YXQ4 647 aa18.94■□□□□ 0.62
SSR4-204ENST00000370087 MAP2K5Q13163 448 aa18.94■□□□□ 0.62
SSR4-204ENST00000370087 NAA16Q6N069 864 aaPredicted RBP18.94■□□□□ 0.62
SSR4-204ENST00000370087 CRACR2BQ8N4Y2 399 aaPredicted RBP18.94■□□□□ 0.62
SSR4-204ENST00000370087 SENP6Q9GZR1 1112 aaPredicted RBP18.94■□□□□ 0.62
SSR4-204ENST00000370087 HDAC5Q9UQL6 1122 aa18.94■□□□□ 0.62
SSR4-204ENST00000370087 ATN1P54259 1190 aaPredicted RBP18.93■□□□□ 0.62
SSR4-204ENST00000370087 PPP4CP60510 307 aa18.93■□□□□ 0.62
SSR4-204ENST00000370087 DYNLL1P63167 89 aaKnown RBP18.93■□□□□ 0.62
SSR4-204ENST00000370087 ZYXQ15942 572 aaKnown RBP18.93■□□□□ 0.62
SSR4-204ENST00000370087 FAM109BQ6ICB4 259 aaPredicted RBP18.93■□□□□ 0.62
SSR4-204ENST00000370087 TRPV1Q8NER1 839 aa18.93■□□□□ 0.62
SSR4-204ENST00000370087 NOL10Q9BSC4 688 aaKnown RBP18.93■□□□□ 0.62
SSR4-204ENST00000370087 ZNF236Q9UL36 1845 aa18.93■□□□□ 0.62
SSR4-204ENST00000370087 A0A0G2JMZ2 1700 aa18.92■□□□□ 0.62
SSR4-204ENST00000370087 GH2P01242 217 aa18.92■□□□□ 0.62
SSR4-204ENST00000370087 CYP2E1P05181 493 aaPredicted RBP18.92■□□□□ 0.62
SSR4-204ENST00000370087 GNAI3P08754 354 aa18.92■□□□□ 0.62
SSR4-204ENST00000370087 UQCRFS1P1P0C7P4 283 aa18.92■□□□□ 0.62
SSR4-204ENST00000370087 USP17L2Q6R6M4 530 aa18.92■□□□□ 0.62
SSR4-204ENST00000370087 CCAR1Q8IX12 1150 aaKnown RBP18.92■□□□□ 0.62
SSR4-204ENST00000370087 BAG3O95817 575 aa18.91■□□□□ 0.62
SSR4-204ENST00000370087 FOXP4Q8IVH2 680 aaPredicted RBP18.91■□□□□ 0.62
SSR4-204ENST00000370087 NPLOC4Q8TAT6 608 aa18.91■□□□□ 0.62
SSR4-204ENST00000370087 GTF3C2Q8WUA4 911 aaPredicted RBP18.91■□□□□ 0.62
SSR4-204ENST00000370087 EDC3Q96F86 508 aaKnown RBP18.91■□□□□ 0.62
SSR4-204ENST00000370087 C12orf42Q96LP6 360 aa18.91■□□□□ 0.62
SSR4-204ENST00000370087 DBNDD2Q9BQY9 259 aa18.91■□□□□ 0.62
SSR4-204ENST00000370087 PIH1D3Q9NQM4 214 aaKnown RBP18.91■□□□□ 0.62
SSR4-204ENST00000370087 BTBD7Q9P203 1132 aa18.91■□□□□ 0.62
SSR4-204ENST00000370087 DDX20Q9UHI6 824 aaKnown RBP18.91■□□□□ 0.62
SSR4-204ENST00000370087 NAV1Q8NEY1 1877 aa18.9■□□□□ 0.62
SSR4-204ENST00000370087 PLCG2P16885 1265 aa18.9■□□□□ 0.62
SSR4-204ENST00000370087 RARSP54136 660 aaKnown RBP18.9■□□□□ 0.62
SSR4-204ENST00000370087 RTP1P59025 263 aa18.9■□□□□ 0.62
SSR4-204ENST00000370087 TRIM34Q9BYJ4 488 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms