RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 MAP2K2P36507 400 aa11.76□□□□□ -0.53
PRPF38B-201ENST00000370021 GGCXP38435 758 aa11.76□□□□□ -0.53
PRPF38B-201ENST00000370021 HLTFQ14527 1009 aaKnown RBP eCLIP11.76□□□□□ -0.53
PRPF38B-201ENST00000370021 EP400NLQ6ZTU2 488 aa11.76□□□□□ -0.53
PRPF38B-201ENST00000370021 MLKLQ8NB16 471 aa11.76□□□□□ -0.53
PRPF38B-201ENST00000370021 KCNB2Q92953 911 aa11.76□□□□□ -0.53
PRPF38B-201ENST00000370021 SCLT1Q96NL6 688 aa11.76□□□□□ -0.53
PRPF38B-201ENST00000370021 DSCC1Q9BVC3 393 aa11.76□□□□□ -0.53
PRPF38B-201ENST00000370021 KDRP35968 1356 aa11.76□□□□□ -0.53
PRPF38B-201ENST00000370021 LRRIQ3A6PVS8 624 aaPredicted RBP11.76□□□□□ -0.53
PRPF38B-201ENST00000370021 RANBP6O60518 1105 aaKnown RBP11.76□□□□□ -0.53
PRPF38B-201ENST00000370021 N4BP2Q86UW6 1770 aaPredicted RBP11.76□□□□□ -0.53
PRPF38B-201ENST00000370021 FMN2Q9NZ56 1722 aa11.76□□□□□ -0.53
PRPF38B-201ENST00000370021 MUM1L1Q5H9M0 696 aa11.76□□□□□ -0.53
PRPF38B-201ENST00000370021 BEND6Q5SZJ8 279 aaPredicted RBP11.76□□□□□ -0.53
PRPF38B-201ENST00000370021 CNGA4Q8IV77 575 aa11.76□□□□□ -0.53
PRPF38B-201ENST00000370021 ANKRD18AQ8IVF6 992 aa11.76□□□□□ -0.53
PRPF38B-201ENST00000370021 FAM71BQ8TC56 605 aa11.76□□□□□ -0.53
PRPF38B-201ENST00000370021 XAGE2Q96GT9 111 aa11.76□□□□□ -0.53
PRPF38B-201ENST00000370021 CSRNP2Q9H175 543 aa11.76□□□□□ -0.53
PRPF38B-201ENST00000370021 VPS54Q9P1Q0 977 aa11.76□□□□□ -0.53
PRPF38B-201ENST00000370021 MKRN1Q9UHC7 482 aaKnown RBP11.76□□□□□ -0.53
PRPF38B-201ENST00000370021 XBP1P17861 261 aa11.75□□□□□ -0.53
PRPF38B-201ENST00000370021 EXOSC10Q01780 885 aaKnown RBP11.75□□□□□ -0.53
PRPF38B-201ENST00000370021 ARID5AQ03989 594 aa11.75□□□□□ -0.53
PRPF38B-201ENST00000370021 C2orf54Q08AI8 447 aa11.75□□□□□ -0.53
PRPF38B-201ENST00000370021 LRRC31Q6UY01 552 aa11.75□□□□□ -0.53
PRPF38B-201ENST00000370021 TRIM47Q96LD4 638 aa11.75□□□□□ -0.53
PRPF38B-201ENST00000370021 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.75□□□□□ -0.53
PRPF38B-201ENST00000370021 LUC7L2Q9Y383 392 aaKnown RBP11.75□□□□□ -0.53
PRPF38B-201ENST00000370021 ZNF185O15231 689 aa11.75□□□□□ -0.53
PRPF38B-201ENST00000370021 MCM7P33993 719 aa11.75□□□□□ -0.53
PRPF38B-201ENST00000370021 SPA17Q15506 151 aa11.75□□□□□ -0.53
PRPF38B-201ENST00000370021 RTN1Q16799 776 aa11.75□□□□□ -0.53
PRPF38B-201ENST00000370021 AMOTQ4VCS5 1084 aa11.75□□□□□ -0.53
PRPF38B-201ENST00000370021 ZMYM1Q5SVZ6 1142 aa11.75□□□□□ -0.53
PRPF38B-201ENST00000370021 CHP1Q99653 195 aa11.75□□□□□ -0.53
PRPF38B-201ENST00000370021 ANKZF1Q9H8Y5 726 aa11.75□□□□□ -0.53
PRPF38B-201ENST00000370021 MED23Q9ULK4 1368 aa11.75□□□□□ -0.53
PRPF38B-201ENST00000370021 TATP17735 454 aaPredicted RBP11.75□□□□□ -0.53
PRPF38B-201ENST00000370021 USP8P40818 1118 aa11.75□□□□□ -0.53
PRPF38B-201ENST00000370021 FXR1P51114 621 aaKnown RBP eCLIP11.75□□□□□ -0.53
PRPF38B-201ENST00000370021 GUCY2FP51841 1108 aa11.75□□□□□ -0.53
PRPF38B-201ENST00000370021 TTLL7Q6ZT98 887 aa11.75□□□□□ -0.53
PRPF38B-201ENST00000370021 PLCD4Q9BRC7 762 aa11.75□□□□□ -0.53
PRPF38B-201ENST00000370021 CWC25Q9NXE8 425 aaPredicted RBP11.75□□□□□ -0.53
PRPF38B-201ENST00000370021 WWC3Q9ULE0 1092 aa11.75□□□□□ -0.53
PRPF38B-201ENST00000370021 SAR1BQ9Y6B6 198 aa11.75□□□□□ -0.53
PRPF38B-201ENST00000370021 COL15A1P39059 1388 aa11.75□□□□□ -0.53
PRPF38B-201ENST00000370021 IL15P40933 162 aaPredicted RBP11.74□□□□□ -0.53
PRPF38B-201ENST00000370021 MTIF2P46199 727 aaKnown RBP11.74□□□□□ -0.53
PRPF38B-201ENST00000370021 GBP6Q6ZN66 633 aa11.74□□□□□ -0.53
PRPF38B-201ENST00000370021 CCDC91Q7Z6B0 441 aa11.74□□□□□ -0.53
PRPF38B-201ENST00000370021 COPRSQ9NQ92 184 aa11.74□□□□□ -0.53
PRPF38B-201ENST00000370021 NPHP4O75161 1426 aaPredicted RBP11.74□□□□□ -0.53
PRPF38B-201ENST00000370021 GUCY1A2P33402 732 aa11.74□□□□□ -0.53
PRPF38B-201ENST00000370021 PPARAQ07869 468 aa11.74□□□□□ -0.53
PRPF38B-201ENST00000370021 CABLES1Q8TDN4 633 aa11.74□□□□□ -0.53
PRPF38B-201ENST00000370021 INTS13Q9NVM9 706 aa11.74□□□□□ -0.53
PRPF38B-201ENST00000370021 TECPR2O15040 1411 aa11.74□□□□□ -0.53
PRPF38B-201ENST00000370021 USP42Q9H9J4 1324 aaKnown RBP11.74□□□□□ -0.53
PRPF38B-201ENST00000370021 TRIM75PA6NK02 468 aa11.74□□□□□ -0.53
PRPF38B-201ENST00000370021 SNAP23O00161 211 aa11.74□□□□□ -0.53
PRPF38B-201ENST00000370021 AKR1B10O60218 316 aa11.74□□□□□ -0.53
PRPF38B-201ENST00000370021 IFIT5Q13325 482 aaKnown RBP11.74□□□□□ -0.53
PRPF38B-201ENST00000370021 PDCLQ13371 301 aa11.74□□□□□ -0.53
PRPF38B-201ENST00000370021 USPL1Q5W0Q7 1092 aa11.74□□□□□ -0.53
PRPF38B-201ENST00000370021 MFSD6Q6ZSS7 791 aa11.74□□□□□ -0.53
PRPF38B-201ENST00000370021 TADA2BQ86TJ2 420 aa11.74□□□□□ -0.53
PRPF38B-201ENST00000370021 NOSTRINQ8IVI9 506 aa11.74□□□□□ -0.53
PRPF38B-201ENST00000370021 TTF2Q9UNY4 1162 aaKnown RBP11.74□□□□□ -0.53
PRPF38B-201ENST00000370021 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.73□□□□□ -0.53
PRPF38B-201ENST00000370021 HGSO14964 777 aaPredicted RBP11.73□□□□□ -0.53
PRPF38B-201ENST00000370021 SNRPA1P09661 255 aaKnown RBP11.73□□□□□ -0.53
PRPF38B-201ENST00000370021 KCNA6P17658 529 aa11.73□□□□□ -0.53
PRPF38B-201ENST00000370021 SCARF1Q14162 830 aa11.73□□□□□ -0.53
PRPF38B-201ENST00000370021 WTAPQ15007 396 aa11.73□□□□□ -0.53
PRPF38B-201ENST00000370021 TSGA10IPQ3SY00 556 aa11.73□□□□□ -0.53
PRPF38B-201ENST00000370021 TDRD12Q587J7 1177 aaKnown RBP11.73□□□□□ -0.53
PRPF38B-201ENST00000370021 IP6K1Q92551 441 aa11.73□□□□□ -0.53
PRPF38B-201ENST00000370021 JAKMIP2Q96AA8 810 aa11.73□□□□□ -0.53
PRPF38B-201ENST00000370021 SMARCAL1Q9NZC9 954 aa11.73□□□□□ -0.53
PRPF38B-201ENST00000370021 EPN1Q9Y6I3 576 aaPredicted RBP11.73□□□□□ -0.53
PRPF38B-201ENST00000370021 FAM169AQ9Y6X4 670 aa11.73□□□□□ -0.53
PRPF38B-201ENST00000370021 FAM205CA6NFA0 338 aa11.73□□□□□ -0.53
PRPF38B-201ENST00000370021 EYA2O00167 538 aa11.73□□□□□ -0.53
PRPF38B-201ENST00000370021 PPFIA4O75335 1185 aa11.73□□□□□ -0.53
PRPF38B-201ENST00000370021 APOA5Q6Q788 366 aa11.73□□□□□ -0.53
PRPF38B-201ENST00000370021 CYP26C1Q6V0L0 522 aa11.73□□□□□ -0.53
PRPF38B-201ENST00000370021 RSRC2Q7L4I2 434 aaKnown RBP11.73□□□□□ -0.53
PRPF38B-201ENST00000370021 BANK1Q8NDB2 785 aa11.73□□□□□ -0.53
PRPF38B-201ENST00000370021 OXER1Q8TDS5 423 aa11.73□□□□□ -0.53
PRPF38B-201ENST00000370021 CAPS2Q9BXY5 557 aa11.73□□□□□ -0.53
PRPF38B-201ENST00000370021 BRMS1Q9HCU9 246 aa11.73□□□□□ -0.53
PRPF38B-201ENST00000370021 PPANQ9NQ55 473 aaKnown RBP11.73□□□□□ -0.53
PRPF38B-201ENST00000370021 LRP2BPQ9P2M1 347 aa11.73□□□□□ -0.53
PRPF38B-201ENST00000370021 GOLGA6L7A0A1B0GV03 622 aa11.73□□□□□ -0.53
PRPF38B-201ENST00000370021 BACH1O14867 736 aa11.73□□□□□ -0.53
PRPF38B-201ENST00000370021 HSF2BPO75031 334 aa11.73□□□□□ -0.53
PRPF38B-201ENST00000370021 MMS19Q96T76 1030 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms