RNA–Protein interactions for RNA: ENST00000369509.1

VANGL1-203, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-203ENST00000369509 MYL10Q9BUA6 226 aa12.97□□□□□ -0.33
VANGL1-203ENST00000369509 IDI2Q9BXS1 227 aa12.97□□□□□ -0.33
VANGL1-203ENST00000369509 PANK2Q9BZ23 570 aa12.97□□□□□ -0.33
VANGL1-203ENST00000369509 COL2A1P02458 1487 aaPredicted RBP12.97□□□□□ -0.33
VANGL1-203ENST00000369509 NPM3O75607 178 aaKnown RBP12.97□□□□□ -0.33
VANGL1-203ENST00000369509 PDCP20941 246 aa12.97□□□□□ -0.33
VANGL1-203ENST00000369509 RASSF7Q02833 373 aa12.97□□□□□ -0.33
VANGL1-203ENST00000369509 NTRK3Q16288 839 aa12.97□□□□□ -0.33
VANGL1-203ENST00000369509 CFAP100Q494V2 611 aa12.97□□□□□ -0.33
VANGL1-203ENST00000369509 FOXD4L5Q5VV16 416 aaPredicted RBP12.97□□□□□ -0.33
VANGL1-203ENST00000369509 LARP1BQ659C4 914 aaKnown RBP12.97□□□□□ -0.33
VANGL1-203ENST00000369509 ZNF654Q8IZM8 581 aa12.97□□□□□ -0.33
VANGL1-203ENST00000369509 FOXD4L4Q8WXT5 416 aaPredicted RBP12.97□□□□□ -0.33
VANGL1-203ENST00000369509 ANP32BQ92688 251 aaKnown RBP12.97□□□□□ -0.33
VANGL1-203ENST00000369509 DDX11Q96FC9 970 aa12.97□□□□□ -0.33
VANGL1-203ENST00000369509 SLC12A7Q9Y666 1083 aa12.97□□□□□ -0.33
VANGL1-203ENST00000369509 DHX16O60231 1041 aaKnown RBP12.96□□□□□ -0.33
VANGL1-203ENST00000369509 NMT2O60551 498 aa12.96□□□□□ -0.33
VANGL1-203ENST00000369509 F13A1P00488 732 aa12.96□□□□□ -0.33
VANGL1-203ENST00000369509 PDIA4P13667 645 aaKnown RBP12.96□□□□□ -0.33
VANGL1-203ENST00000369509 CDK8P49336 464 aa12.96□□□□□ -0.33
VANGL1-203ENST00000369509 RCSD1Q6JBY9 416 aa12.96□□□□□ -0.33
VANGL1-203ENST00000369509 AGBL3Q8NEM8 1001 aa12.96□□□□□ -0.33
VANGL1-203ENST00000369509 IL17RBQ9NRM6 502 aa12.96□□□□□ -0.33
VANGL1-203ENST00000369509 FAM198AQ9UFP1 575 aa12.96□□□□□ -0.33
VANGL1-203ENST00000369509 ZBTB12Q9Y330 459 aaPredicted RBP12.96□□□□□ -0.33
VANGL1-203ENST00000369509 PLIN4Q96Q06 1357 aa12.96□□□□□ -0.34
VANGL1-203ENST00000369509 SRCAPQ6ZRS2 3230 aa12.96□□□□□ -0.34
VANGL1-203ENST00000369509 TSPY2A6NKD2 308 aa12.95□□□□□ -0.34
VANGL1-203ENST00000369509 GOLGA8AA7E2F4 631 aa12.95□□□□□ -0.34
VANGL1-203ENST00000369509 NCLP19338 710 aaKnown RBP12.95□□□□□ -0.34
VANGL1-203ENST00000369509 ADD1P35611 737 aaKnown RBP12.95□□□□□ -0.34
VANGL1-203ENST00000369509 RBM5P52756 815 aaKnown RBP eCLIP12.95□□□□□ -0.34
VANGL1-203ENST00000369509 CACNB3P54284 484 aa12.95□□□□□ -0.34
VANGL1-203ENST00000369509 CDC37L1Q7L3B6 337 aa12.95□□□□□ -0.34
VANGL1-203ENST00000369509 CHAMP1Q96JM3 812 aa12.95□□□□□ -0.34
VANGL1-203ENST00000369509 PRMT6Q96LA8 375 aaPredicted RBP12.95□□□□□ -0.34
VANGL1-203ENST00000369509 MYH4Q9Y623 1939 aa12.95□□□□□ -0.34
VANGL1-203ENST00000369509 SPDYE2BA6NHP3 402 aa12.95□□□□□ -0.34
VANGL1-203ENST00000369509 SPDYE6P0CI01 402 aa12.95□□□□□ -0.34
VANGL1-203ENST00000369509 TFAP4Q01664 338 aa12.95□□□□□ -0.34
VANGL1-203ENST00000369509 IFIT1BQ5T764 474 aaKnown RBP12.95□□□□□ -0.34
VANGL1-203ENST00000369509 TTC6Q86TZ1 520 aa12.95□□□□□ -0.34
VANGL1-203ENST00000369509 ZFPM1Q8IX07 1006 aa12.95□□□□□ -0.34
VANGL1-203ENST00000369509 JDP2Q8WYK2 163 aa12.95□□□□□ -0.34
VANGL1-203ENST00000369509 TRIM44Q96DX7 344 aaPredicted RBP12.95□□□□□ -0.34
VANGL1-203ENST00000369509 FHDC1Q9C0D6 1143 aaPredicted RBP12.95□□□□□ -0.34
VANGL1-203ENST00000369509 MKNK2Q9HBH9 465 aa12.95□□□□□ -0.34
VANGL1-203ENST00000369509 ZNF287Q9HBT7 754 aa12.95□□□□□ -0.34
VANGL1-203ENST00000369509 TCP11L1Q9NUJ3 509 aa12.95□□□□□ -0.34
VANGL1-203ENST00000369509 LMBRD1Q9NUN5 540 aa12.95□□□□□ -0.34
VANGL1-203ENST00000369509 ATRNL1Q5VV63 1379 aa12.95□□□□□ -0.34
VANGL1-203ENST00000369509 VPS37CA5D8V6 355 aaPredicted RBP12.94□□□□□ -0.34
VANGL1-203ENST00000369509 PPFIA3O75145 1194 aa12.94□□□□□ -0.34
VANGL1-203ENST00000369509 TROAPQ12815 778 aa12.94□□□□□ -0.34
VANGL1-203ENST00000369509 CIAPIN1Q6FI81 312 aa12.94□□□□□ -0.34
VANGL1-203ENST00000369509 CCDC144CPQ8IYA2 1237 aa12.94□□□□□ -0.34
VANGL1-203ENST00000369509 MTMR14Q8NCE2 650 aa12.94□□□□□ -0.34
VANGL1-203ENST00000369509 ANKS1AQ92625 1134 aa12.94□□□□□ -0.34
VANGL1-203ENST00000369509 EHD4Q9H223 541 aa12.94□□□□□ -0.34
VANGL1-203ENST00000369509 TDRD3Q9H7E2 651 aaKnown RBP12.94□□□□□ -0.34
VANGL1-203ENST00000369509 CPLX1O14810 134 aa12.93□□□□□ -0.34
VANGL1-203ENST00000369509 ZNF445P59923 1031 aa12.93□□□□□ -0.34
VANGL1-203ENST00000369509 SH3BP5LQ7L8J4 393 aa12.93□□□□□ -0.34
VANGL1-203ENST00000369509 FAM184AQ8NB25 1140 aa12.93□□□□□ -0.34
VANGL1-203ENST00000369509 ZBED3Q96IU2 234 aaPredicted RBP12.93□□□□□ -0.34
VANGL1-203ENST00000369509 STK36Q9NRP7 1315 aa12.93□□□□□ -0.34
VANGL1-203ENST00000369509 FZD9O00144 591 aa12.93□□□□□ -0.34
VANGL1-203ENST00000369509 DDAH1O94760 285 aa12.93□□□□□ -0.34
VANGL1-203ENST00000369509 TSPY3P0CV98 308 aa12.93□□□□□ -0.34
VANGL1-203ENST00000369509 TSPY8P0CW00 308 aa12.93□□□□□ -0.34
VANGL1-203ENST00000369509 NOVP48745 357 aa12.93□□□□□ -0.34
VANGL1-203ENST00000369509 RTN1Q16799 776 aa12.93□□□□□ -0.34
VANGL1-203ENST00000369509 SYNE3Q6ZMZ3 975 aa12.93□□□□□ -0.34
VANGL1-203ENST00000369509 GAS2L3Q86XJ1 694 aa12.93□□□□□ -0.34
VANGL1-203ENST00000369509 DGKHQ86XP1 1220 aa12.93□□□□□ -0.34
VANGL1-203ENST00000369509 ZNF444Q8N0Y2 327 aaPredicted RBP12.93□□□□□ -0.34
VANGL1-203ENST00000369509 FANCBQ8NB91 859 aa12.93□□□□□ -0.34
VANGL1-203ENST00000369509 NEDD1Q8NHV4 660 aa12.93□□□□□ -0.34
VANGL1-203ENST00000369509 DNAJC18Q9H819 358 aa12.93□□□□□ -0.34
VANGL1-203ENST00000369509 SERPINB13Q9UIV8 391 aa12.93□□□□□ -0.34
VANGL1-203ENST00000369509 HDAC9Q9UKV0 1011 aa12.93□□□□□ -0.34
VANGL1-203ENST00000369509 KIF3AQ9Y496 699 aa12.93□□□□□ -0.34
VANGL1-203ENST00000369509 DDTLA6NHG4 134 aaPredicted RBP12.92□□□□□ -0.34
VANGL1-203ENST00000369509 ENTPD3O75355 529 aa12.92□□□□□ -0.34
VANGL1-203ENST00000369509 PRPF40AO75400 957 aaKnown RBP12.92□□□□□ -0.34
VANGL1-203ENST00000369509 CDKL5O76039 1030 aa12.92□□□□□ -0.34
VANGL1-203ENST00000369509 MBD3O95983 291 aa12.92□□□□□ -0.34
VANGL1-203ENST00000369509 IFNAR1P17181 557 aa12.92□□□□□ -0.34
VANGL1-203ENST00000369509 SHMT1P34896 483 aa12.92□□□□□ -0.34
VANGL1-203ENST00000369509 OGFOD1Q8N543 542 aa12.92□□□□□ -0.34
VANGL1-203ENST00000369509 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.92□□□□□ -0.34
VANGL1-203ENST00000369509 DHX36Q9H2U1 1008 aaKnown RBP12.92□□□□□ -0.34
VANGL1-203ENST00000369509 ORC3Q9UBD5 711 aaPredicted RBP12.92□□□□□ -0.34
VANGL1-203ENST00000369509 SWAP70Q9UH65 585 aa12.92□□□□□ -0.34
VANGL1-203ENST00000369509 NASPP49321 788 aaPredicted RBP12.92□□□□□ -0.34
VANGL1-203ENST00000369509 CCDC173Q0VFZ6 552 aa12.92□□□□□ -0.34
VANGL1-203ENST00000369509 TCP10Q12799 353 aa12.92□□□□□ -0.34
VANGL1-203ENST00000369509 PPP2R5BQ15173 497 aa12.92□□□□□ -0.34
VANGL1-203ENST00000369509 CCDC178Q5BJE1 867 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms