RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 CEP290O15078 2479 aa10.5□□□□□ -0.73
SNX27-201ENST00000368838 PRDX5P30044 214 aa10.5□□□□□ -0.73
SNX27-201ENST00000368838 PHKA1P46020 1223 aa10.5□□□□□ -0.73
SNX27-201ENST00000368838 MCM2P49736 904 aa10.5□□□□□ -0.73
SNX27-201ENST00000368838 HDLBPQ00341 1268 aaKnown RBP10.5□□□□□ -0.73
SNX27-201ENST00000368838 NECTIN1Q15223 517 aa10.5□□□□□ -0.73
SNX27-201ENST00000368838 MCMDC2Q4G0Z9 681 aa10.5□□□□□ -0.73
SNX27-201ENST00000368838 KIAA1211Q6ZU35 1233 aa10.5□□□□□ -0.73
SNX27-201ENST00000368838 DSCC1Q9BVC3 393 aa10.5□□□□□ -0.73
SNX27-201ENST00000368838 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.5□□□□□ -0.73
SNX27-201ENST00000368838 EFCC1Q9HA90 598 aa10.5□□□□□ -0.73
SNX27-201ENST00000368838 HMG20BQ9P0W2 317 aa10.5□□□□□ -0.73
SNX27-201ENST00000368838 DAGLAQ9Y4D2 1042 aa10.5□□□□□ -0.73
SNX27-201ENST00000368838 MKI67P46013 3256 aaKnown RBP10.5□□□□□ -0.73
SNX27-201ENST00000368838 RPAP1Q9BWH6 1393 aaPredicted RBP10.49□□□□□ -0.73
SNX27-201ENST00000368838 MAST3O60307 1309 aa10.49□□□□□ -0.73
SNX27-201ENST00000368838 CCDC171Q6TFL3 1326 aa10.49□□□□□ -0.73
SNX27-201ENST00000368838 SALL1Q9NSC2 1324 aa10.49□□□□□ -0.73
SNX27-201ENST00000368838 SPDYE5A6NIY4 337 aa10.49□□□□□ -0.73
SNX27-201ENST00000368838 UNCXA6NJT0 531 aa10.49□□□□□ -0.73
SNX27-201ENST00000368838 IRF6O14896 467 aa10.49□□□□□ -0.73
SNX27-201ENST00000368838 RNF113AO15541 343 aaKnown RBP10.49□□□□□ -0.73
SNX27-201ENST00000368838 SLURP2P0DP57 97 aa10.49□□□□□ -0.73
SNX27-201ENST00000368838 INPP5BP32019 993 aa10.49□□□□□ -0.73
SNX27-201ENST00000368838 MCAMP43121 646 aa10.49□□□□□ -0.73
SNX27-201ENST00000368838 GTF2A2P52657 109 aa10.49□□□□□ -0.73
SNX27-201ENST00000368838 NFIAQ12857 509 aa10.49□□□□□ -0.73
SNX27-201ENST00000368838 CDC42EP5Q6NZY7 148 aa10.49□□□□□ -0.73
SNX27-201ENST00000368838 HHIPL2Q6UWX4 724 aa10.49□□□□□ -0.73
SNX27-201ENST00000368838 GPIHBP1Q8IV16 184 aa10.49□□□□□ -0.73
SNX27-201ENST00000368838 ARHGAP39Q9C0H5 1083 aa10.49□□□□□ -0.73
SNX27-201ENST00000368838 ZFYVE28Q9HCC9 887 aa10.49□□□□□ -0.73
SNX27-201ENST00000368838 ZMYM6O95789 1325 aa10.48□□□□□ -0.73
SNX27-201ENST00000368838 EN2P19622 333 aaPredicted RBP10.48□□□□□ -0.73
SNX27-201ENST00000368838 NMIQ13287 307 aaPredicted RBP10.48□□□□□ -0.73
SNX27-201ENST00000368838 PRPF38BQ5VTL8 546 aaKnown RBP10.48□□□□□ -0.73
SNX27-201ENST00000368838 CWC27Q6UX04 472 aaKnown RBP10.48□□□□□ -0.73
SNX27-201ENST00000368838 FAM83AQ86UY5 434 aa10.48□□□□□ -0.73
SNX27-201ENST00000368838 ZFPM1Q8IX07 1006 aa10.48□□□□□ -0.73
SNX27-201ENST00000368838 SPATA5Q8NB90 893 aa10.48□□□□□ -0.73
SNX27-201ENST00000368838 WDR66Q8TBY9 1149 aa10.48□□□□□ -0.73
SNX27-201ENST00000368838 APPBP2Q92624 585 aa10.48□□□□□ -0.73
SNX27-201ENST00000368838 TMEM106CQ9BVX2 250 aa10.48□□□□□ -0.73
SNX27-201ENST00000368838 ZNF341Q9BYN7 854 aa10.48□□□□□ -0.73
SNX27-201ENST00000368838 ALDH8A1Q9H2A2 487 aaPredicted RBP10.48□□□□□ -0.73
SNX27-201ENST00000368838 USP40Q9NVE5 1235 aa10.48□□□□□ -0.73
SNX27-201ENST00000368838 DENND2AQ9ULE3 1009 aa10.48□□□□□ -0.73
SNX27-201ENST00000368838 PTCH2Q9Y6C5 1203 aa10.48□□□□□ -0.73
SNX27-201ENST00000368838 BTBD19C9JJ37 291 aa10.47□□□□□ -0.73
SNX27-201ENST00000368838 GOLIM4O00461 696 aa10.47□□□□□ -0.73
SNX27-201ENST00000368838 CYP2E1P05181 493 aaPredicted RBP10.47□□□□□ -0.73
SNX27-201ENST00000368838 LDHBP07195 334 aaKnown RBP10.47□□□□□ -0.73
SNX27-201ENST00000368838 ADD2P35612 726 aa10.47□□□□□ -0.73
SNX27-201ENST00000368838 NT5C2P49902 561 aa10.47□□□□□ -0.73
SNX27-201ENST00000368838 RASGRF1Q13972 1273 aa10.47□□□□□ -0.73
SNX27-201ENST00000368838 RNF20Q5VTR2 975 aa10.47□□□□□ -0.73
SNX27-201ENST00000368838 ERO1BQ86YB8 467 aa10.47□□□□□ -0.73
SNX27-201ENST00000368838 IL25Q9H293 177 aa10.47□□□□□ -0.73
SNX27-201ENST00000368838 ANO2Q9NQ90 1003 aa10.47□□□□□ -0.73
SNX27-201ENST00000368838 EMILIN3Q9NT22 766 aa10.47□□□□□ -0.73
SNX27-201ENST00000368838 CPA4Q9UI42 421 aa10.47□□□□□ -0.73
SNX27-201ENST00000368838 FOCADQ5VW36 1801 aa10.46□□□□□ -0.73
SNX27-201ENST00000368838 A0A0D9SFI3 127 aa10.46□□□□□ -0.73
SNX27-201ENST00000368838 CETPP11597 493 aa10.46□□□□□ -0.73
SNX27-201ENST00000368838 ZAP70P43403 619 aa10.46□□□□□ -0.73
SNX27-201ENST00000368838 MAP3K12Q12852 859 aa10.46□□□□□ -0.73
SNX27-201ENST00000368838 PPIL2Q13356 520 aa10.46□□□□□ -0.73
SNX27-201ENST00000368838 SNAPC2Q13487 334 aa10.46□□□□□ -0.73
SNX27-201ENST00000368838 KRT32Q14532 448 aa10.46□□□□□ -0.73
SNX27-201ENST00000368838 ALX1Q15699 326 aa10.46□□□□□ -0.73
SNX27-201ENST00000368838 DCAF15Q66K64 600 aa10.46□□□□□ -0.73
SNX27-201ENST00000368838 CERS3Q8IU89 383 aa10.46□□□□□ -0.73
SNX27-201ENST00000368838 FBXL16Q8N461 479 aa10.46□□□□□ -0.73
SNX27-201ENST00000368838 KRI1Q8N9T8 703 aaKnown RBP10.46□□□□□ -0.73
SNX27-201ENST00000368838 SH3TC2Q8TF17 1288 aa10.46□□□□□ -0.73
SNX27-201ENST00000368838 FAM151AQ8WW52 585 aa10.46□□□□□ -0.73
SNX27-201ENST00000368838 DNAJC2Q99543 621 aaKnown RBP10.46□□□□□ -0.73
SNX27-201ENST00000368838 KDM4CQ9H3R0 1056 aa10.46□□□□□ -0.73
SNX27-201ENST00000368838 FAM198AQ9UFP1 575 aa10.46□□□□□ -0.73
SNX27-201ENST00000368838 ABCF2Q9UG63 623 aa10.46□□□□□ -0.73
SNX27-201ENST00000368838 SUGT1Q9Y2Z0 365 aa10.46□□□□□ -0.73
SNX27-201ENST00000368838 SIPA1L1O43166 1804 aa10.45□□□□□ -0.74
SNX27-201ENST00000368838 MYH1P12882 1939 aa10.45□□□□□ -0.74
SNX27-201ENST00000368838 TCRBV5S4A2TA0A5A2 114 aa10.45□□□□□ -0.74
SNX27-201ENST00000368838 ST18O60284 1047 aa10.45□□□□□ -0.74
SNX27-201ENST00000368838 ZKSCAN1P17029 563 aaPredicted RBP10.45□□□□□ -0.74
SNX27-201ENST00000368838 PICALMQ13492 652 aa10.45□□□□□ -0.74
SNX27-201ENST00000368838 SLC9C1Q4G0N8 1177 aa10.45□□□□□ -0.74
SNX27-201ENST00000368838 PPP1R15BQ5SWA1 713 aa10.45□□□□□ -0.74
SNX27-201ENST00000368838 FKBP1CQ5VVH2 108 aa10.45□□□□□ -0.74
SNX27-201ENST00000368838 ZGPATQ8N5A5 531 aaKnown RBP10.45□□□□□ -0.74
SNX27-201ENST00000368838 FAM227BQ96M60 508 aa10.45□□□□□ -0.74
SNX27-201ENST00000368838 MRIQ9BWK5 157 aa10.45□□□□□ -0.74
SNX27-201ENST00000368838 TBC1D2Q9BYX2 928 aa10.45□□□□□ -0.74
SNX27-201ENST00000368838 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.45□□□□□ -0.74
SNX27-201ENST00000368838 MAST2Q6P0Q8 1798 aa10.44□□□□□ -0.74
SNX27-201ENST00000368838 DPYSL4O14531 572 aa10.44□□□□□ -0.74
SNX27-201ENST00000368838 TRIM66O15016 1216 aa10.44□□□□□ -0.74
SNX27-201ENST00000368838 TLR2O60603 784 aa10.44□□□□□ -0.74
SNX27-201ENST00000368838 MAP4K4O95819 1239 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms