RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 WTAPQ15007 396 aa12.34□□□□□ -0.43
TPM3-212ENST00000368533 UVSSAQ2YD98 709 aa12.34□□□□□ -0.43
TPM3-212ENST00000368533 NUP62CLQ9H1M0 184 aa12.34□□□□□ -0.43
TPM3-212ENST00000368533 ZNF277Q9NRM2 450 aaPredicted RBP12.34□□□□□ -0.43
TPM3-212ENST00000368533 ZBTB43O43298 467 aa12.34□□□□□ -0.43
TPM3-212ENST00000368533 IL1R1P14778 569 aa12.34□□□□□ -0.43
TPM3-212ENST00000368533 LIG1P18858 919 aa12.34□□□□□ -0.43
TPM3-212ENST00000368533 GTF2F1P35269 517 aaKnown RBP eCLIP12.34□□□□□ -0.43
TPM3-212ENST00000368533 TCP10Q12799 353 aa12.34□□□□□ -0.43
TPM3-212ENST00000368533 ALX1Q15699 326 aa12.34□□□□□ -0.43
TPM3-212ENST00000368533 RTFDC1Q9BY42 306 aaPredicted RBP12.34□□□□□ -0.43
TPM3-212ENST00000368533 ERICH2A1L162 156 aa12.33□□□□□ -0.44
TPM3-212ENST00000368533 FAM196BA6NMK8 535 aa12.33□□□□□ -0.44
TPM3-212ENST00000368533 STAG1Q8WVM7 1258 aa12.33□□□□□ -0.44
TPM3-212ENST00000368533 AGXT2Q9BYV1 514 aa12.33□□□□□ -0.44
TPM3-212ENST00000368533 TNMDQ9H2S6 317 aa12.33□□□□□ -0.44
TPM3-212ENST00000368533 DACT1Q9NYF0 836 aa12.33□□□□□ -0.44
TPM3-212ENST00000368533 USP17L3A6NCW0 530 aa12.33□□□□□ -0.44
TPM3-212ENST00000368533 USP17L4A6NCW7 530 aa12.33□□□□□ -0.44
TPM3-212ENST00000368533 TSPY2A6NKD2 308 aa12.33□□□□□ -0.44
TPM3-212ENST00000368533 MAP3K11Q16584 847 aa12.33□□□□□ -0.44
TPM3-212ENST00000368533 USP17L1Q7RTZ2 530 aa12.33□□□□□ -0.44
TPM3-212ENST00000368533 DRC7Q8IY82 874 aa12.33□□□□□ -0.44
TPM3-212ENST00000368533 SLC26A6Q9BXS9 759 aa12.33□□□□□ -0.44
TPM3-212ENST00000368533 KRT23Q9C075 422 aa12.33□□□□□ -0.44
TPM3-212ENST00000368533 ALDH8A1Q9H2A2 487 aaPredicted RBP12.33□□□□□ -0.44
TPM3-212ENST00000368533 PYCARDQ9ULZ3 195 aa12.33□□□□□ -0.44
TPM3-212ENST00000368533 MROH7-TTC4A0A0A0MT08 1334 aa12.33□□□□□ -0.44
TPM3-212ENST00000368533 PPIP5K2O43314 1243 aa12.33□□□□□ -0.44
TPM3-212ENST00000368533 ECE2O60344 883 aa12.33□□□□□ -0.44
TPM3-212ENST00000368533 RAD17O75943 681 aa12.33□□□□□ -0.44
TPM3-212ENST00000368533 CLEC10AQ8IUN9 316 aa12.33□□□□□ -0.44
TPM3-212ENST00000368533 ZNF274Q96GC6 653 aaPredicted RBP12.33□□□□□ -0.44
TPM3-212ENST00000368533 DAGLAQ9Y4D2 1042 aa12.33□□□□□ -0.44
TPM3-212ENST00000368533 BAG3O95817 575 aa12.32□□□□□ -0.44
TPM3-212ENST00000368533 GUCY1A2P33402 732 aa12.32□□□□□ -0.44
TPM3-212ENST00000368533 EIF6P56537 245 aaKnown RBP12.32□□□□□ -0.44
TPM3-212ENST00000368533 ESR2Q92731 530 aa12.32□□□□□ -0.44
TPM3-212ENST00000368533 MKNK2Q9HBH9 465 aa12.32□□□□□ -0.44
TPM3-212ENST00000368533 TICAM2Q86XR7 235 aa12.32□□□□□ -0.44
TPM3-212ENST00000368533 ENAHQ8N8S7 591 aaPredicted RBP12.32□□□□□ -0.44
TPM3-212ENST00000368533 SCAND2PQ9GZW5 306 aaPredicted RBP12.32□□□□□ -0.44
TPM3-212ENST00000368533 COA1Q9GZY4 146 aa12.31□□□□□ -0.44
TPM3-212ENST00000368533 CNNM2Q9H8M5 875 aa12.31□□□□□ -0.44
TPM3-212ENST00000368533 ZBTB12Q9Y330 459 aaPredicted RBP12.31□□□□□ -0.44
TPM3-212ENST00000368533 TFAP4Q01664 338 aa12.31□□□□□ -0.44
TPM3-212ENST00000368533 SART3Q15020 963 aaKnown RBP12.31□□□□□ -0.44
TPM3-212ENST00000368533 SYNE3Q6ZMZ3 975 aa12.31□□□□□ -0.44
TPM3-212ENST00000368533 RNF41Q9H4P4 317 aaPredicted RBP12.31□□□□□ -0.44
TPM3-212ENST00000368533 DUOX1Q9NRD9 1551 aa12.31□□□□□ -0.44
TPM3-212ENST00000368533 NFIAQ12857 509 aa12.31□□□□□ -0.44
TPM3-212ENST00000368533 IFIT1BQ5T764 474 aaKnown RBP12.31□□□□□ -0.44
TPM3-212ENST00000368533 SMARCC2Q8TAQ2 1214 aa12.31□□□□□ -0.44
TPM3-212ENST00000368533 C8orf76Q96K31 380 aa12.31□□□□□ -0.44
TPM3-212ENST00000368533 CPVLQ9H3G5 476 aa12.31□□□□□ -0.44
TPM3-212ENST00000368533 DDX4Q9NQI0 724 aaKnown RBP12.31□□□□□ -0.44
TPM3-212ENST00000368533 STX8Q9UNK0 236 aa12.31□□□□□ -0.44
TPM3-212ENST00000368533 CCDC88AQ3V6T2 1871 aa12.3□□□□□ -0.44
TPM3-212ENST00000368533 RAD21O60216 631 aa12.3□□□□□ -0.44
TPM3-212ENST00000368533 SLFN14P0C7P3 912 aa12.3□□□□□ -0.44
TPM3-212ENST00000368533 LUZP1Q86V48 1076 aa12.3□□□□□ -0.44
TPM3-212ENST00000368533 ZFPM1Q8IX07 1006 aa12.3□□□□□ -0.44
TPM3-212ENST00000368533 ZNF654Q8IZM8 581 aa12.3□□□□□ -0.44
TPM3-212ENST00000368533 CNKSR1Q969H4 720 aa12.3□□□□□ -0.44
TPM3-212ENST00000368533 ST7Q9NRC1 585 aa12.3□□□□□ -0.44
TPM3-212ENST00000368533 FAM217BQ9NTX9 383 aaPredicted RBP12.3□□□□□ -0.44
TPM3-212ENST00000368533 ATP2B1P20020 1258 aa12.3□□□□□ -0.44
TPM3-212ENST00000368533 GSTO1P78417 241 aa12.3□□□□□ -0.44
TPM3-212ENST00000368533 TYRO3Q06418 890 aa12.3□□□□□ -0.44
TPM3-212ENST00000368533 ILDR1Q86SU0 546 aaPredicted RBP12.3□□□□□ -0.44
TPM3-212ENST00000368533 LEO1Q8WVC0 666 aaPredicted RBP12.3□□□□□ -0.44
TPM3-212ENST00000368533 TMEM87BQ96K49 555 aa12.3□□□□□ -0.44
TPM3-212ENST00000368533 ZSCAN10Q96SZ4 725 aaPredicted RBP12.3□□□□□ -0.44
TPM3-212ENST00000368533 ATP8A2Q9NTI2 1148 aa12.3□□□□□ -0.44
TPM3-212ENST00000368533 USP40Q9NVE5 1235 aa12.3□□□□□ -0.44
TPM3-212ENST00000368533 KCNJ14Q9UNX9 436 aa12.3□□□□□ -0.44
TPM3-212ENST00000368533 PLEKHA8P1O95397 391 aa12.29□□□□□ -0.44
TPM3-212ENST00000368533 LDHCP07864 332 aa12.29□□□□□ -0.44
TPM3-212ENST00000368533 TTLL6Q8N841 843 aa12.29□□□□□ -0.44
TPM3-212ENST00000368533 ALG1Q9BT22 464 aa12.29□□□□□ -0.44
TPM3-212ENST00000368533 FLT1P17948 1338 aa12.29□□□□□ -0.44
TPM3-212ENST00000368533 ADAMTSL1Q8N6G6 1762 aa12.29□□□□□ -0.44
TPM3-212ENST00000368533 RHBDL3P58872 404 aa12.29□□□□□ -0.44
TPM3-212ENST00000368533 RTN1Q16799 776 aa12.29□□□□□ -0.44
TPM3-212ENST00000368533 SHROOM1Q2M3G4 852 aaPredicted RBP12.29□□□□□ -0.44
TPM3-212ENST00000368533 IQCA1Q86XH1 822 aa12.29□□□□□ -0.44
TPM3-212ENST00000368533 ANKRD7Q92527 254 aa12.29□□□□□ -0.44
TPM3-212ENST00000368533 TRIM34Q9BYJ4 488 aa12.29□□□□□ -0.44
TPM3-212ENST00000368533 ZMYM6O95789 1325 aa12.29□□□□□ -0.44
TPM3-212ENST00000368533 YDJCA8MPS7 323 aa12.28□□□□□ -0.44
TPM3-212ENST00000368533 CAPN2P17655 700 aa12.28□□□□□ -0.44
TPM3-212ENST00000368533 IARSP41252 1262 aaKnown RBP12.28□□□□□ -0.44
TPM3-212ENST00000368533 NCBP1Q09161 790 aaKnown RBP12.28□□□□□ -0.44
TPM3-212ENST00000368533 ANO6Q4KMQ2 910 aa12.28□□□□□ -0.44
TPM3-212ENST00000368533 C12orf60Q5U649 245 aa12.28□□□□□ -0.44
TPM3-212ENST00000368533 STYK1Q6J9G0 422 aa12.28□□□□□ -0.44
TPM3-212ENST00000368533 C15orf52Q6ZUT6 534 aaKnown RBP12.28□□□□□ -0.44
TPM3-212ENST00000368533 ZSCAN29Q8IWY8 852 aaPredicted RBP12.28□□□□□ -0.44
TPM3-212ENST00000368533 EYA3Q99504 573 aa12.28□□□□□ -0.44
TPM3-212ENST00000368533 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms