RNA–Protein interactions for RNA: ENST00000368301.6

LMNA-207, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-207ENST00000368301 TPM3P06753 285 aa20.89■□□□□ 0.94
LMNA-207ENST00000368301 TPM2P07951 284 aa20.89■□□□□ 0.94
LMNA-207ENST00000368301 ATP2B1P20020 1258 aa20.89■□□□□ 0.94
LMNA-207ENST00000368301 TROAPQ12815 778 aa20.89■□□□□ 0.94
LMNA-207ENST00000368301 GRAPQ13588 217 aa20.89■□□□□ 0.94
LMNA-207ENST00000368301 DNTTIP2Q5QJE6 756 aaKnown RBP20.89■□□□□ 0.94
LMNA-207ENST00000368301 SEPT12Q8IYM1 358 aa20.89■□□□□ 0.94
LMNA-207ENST00000368301 GRAPLQ8TC17 118 aaPredicted RBP20.89■□□□□ 0.94
LMNA-207ENST00000368301 PCDHB6Q9Y5E3 794 aa20.89■□□□□ 0.94
LMNA-207ENST00000368301 AFF2P51816 1311 aa20.89■□□□□ 0.94
LMNA-207ENST00000368301 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.89■□□□□ 0.93
LMNA-207ENST00000368301 ARID5BQ14865 1188 aa20.89■□□□□ 0.93
LMNA-207ENST00000368301 CATIPQ7Z7H3 387 aa20.89■□□□□ 0.93
LMNA-207ENST00000368301 IQCA1Q86XH1 822 aa20.89■□□□□ 0.93
LMNA-207ENST00000368301 DZIP1Q86YF9 867 aaKnown RBP20.89■□□□□ 0.93
LMNA-207ENST00000368301 FOXP1Q9H334 677 aaPredicted RBP20.89■□□□□ 0.93
LMNA-207ENST00000368301 BAZ2BQ9UIF8 2168 aaKnown RBP20.89■□□□□ 0.93
LMNA-207ENST00000368301 USP17L8P0C7I0 530 aa20.88■□□□□ 0.93
LMNA-207ENST00000368301 PNOCQ13519 176 aa20.88■□□□□ 0.93
LMNA-207ENST00000368301 PRR5LQ6MZQ0 368 aa20.88■□□□□ 0.93
LMNA-207ENST00000368301 RNF26Q9BY78 433 aaPredicted RBP20.88■□□□□ 0.93
LMNA-207ENST00000368301 FAM237AA0A1B0GTK4 181 aa20.88■□□□□ 0.93
LMNA-207ENST00000368301 CUTAO60888 179 aa20.88■□□□□ 0.93
LMNA-207ENST00000368301 LONRF3Q496Y0 759 aa20.88■□□□□ 0.93
LMNA-207ENST00000368301 EARS2Q5JPH6 523 aaKnown RBP20.88■□□□□ 0.93
LMNA-207ENST00000368301 V9GY48 417 aaPredicted RBP20.88■□□□□ 0.93
LMNA-207ENST00000368301 CCDC88AQ3V6T2 1871 aa20.87■□□□□ 0.93
LMNA-207ENST00000368301 NLRP12P59046 1061 aa20.87■□□□□ 0.93
LMNA-207ENST00000368301 DIXDC1Q155Q3 683 aa20.87■□□□□ 0.93
LMNA-207ENST00000368301 CACTINQ8WUQ7 758 aaKnown RBP20.87■□□□□ 0.93
LMNA-207ENST00000368301 CABP5Q9NP86 173 aa20.87■□□□□ 0.93
LMNA-207ENST00000368301 KIAA1551Q9HCM1 1747 aa20.87■□□□□ 0.93
LMNA-207ENST00000368301 MAST2Q6P0Q8 1798 aa20.87■□□□□ 0.93
LMNA-207ENST00000368301 CDC25BP30305 580 aa20.87■□□□□ 0.93
LMNA-207ENST00000368301 KRI1Q8N9T8 703 aaKnown RBP20.87■□□□□ 0.93
LMNA-207ENST00000368301 TIGD1Q96MW7 591 aa20.87■□□□□ 0.93
LMNA-207ENST00000368301 NAT10Q9H0A0 1025 aaKnown RBP20.87■□□□□ 0.93
LMNA-207ENST00000368301 ATP8A2Q9NTI2 1148 aa20.87■□□□□ 0.93
LMNA-207ENST00000368301 LAMB1P07942 1786 aa20.87■□□□□ 0.93
LMNA-207ENST00000368301 DLEC1Q9Y238 1755 aa20.87■□□□□ 0.93
LMNA-207ENST00000368301 FOXN1O15353 648 aa20.86■□□□□ 0.93
LMNA-207ENST00000368301 ORC4O43929 436 aa20.86■□□□□ 0.93
LMNA-207ENST00000368301 ZRSR1Q15695 479 aaKnown RBP20.86■□□□□ 0.93
LMNA-207ENST00000368301 METTL16Q86W50 562 aaKnown RBP20.86■□□□□ 0.93
LMNA-207ENST00000368301 MRFAP1L1Q96HT8 127 aa20.86■□□□□ 0.93
LMNA-207ENST00000368301 MCM9Q9NXL9 1143 aa20.86■□□□□ 0.93
LMNA-207ENST00000368301 FBXO2Q9UK22 296 aaPredicted RBP20.86■□□□□ 0.93
LMNA-207ENST00000368301 UQCRHLA0A096LP55 91 aa20.86■□□□□ 0.93
LMNA-207ENST00000368301 UQCRHP07919 91 aa20.86■□□□□ 0.93
LMNA-207ENST00000368301 NOM1Q5C9Z4 860 aaKnown RBP20.86■□□□□ 0.93
LMNA-207ENST00000368301 KCNH3Q9ULD8 1083 aa20.86■□□□□ 0.93
LMNA-207ENST00000368301 TERF1P54274 439 aa20.85■□□□□ 0.93
LMNA-207ENST00000368301 RBM6P78332 1123 aaKnown RBP20.85■□□□□ 0.93
LMNA-207ENST00000368301 GPSM2P81274 684 aa20.85■□□□□ 0.93
LMNA-207ENST00000368301 AKAP17AQ02040 695 aaKnown RBP20.85■□□□□ 0.93
LMNA-207ENST00000368301 SH3RF3Q8TEJ3 882 aaPredicted RBP20.85■□□□□ 0.93
LMNA-207ENST00000368301 PCP11498 1178 aaKnown RBP20.85■□□□□ 0.93
LMNA-207ENST00000368301 RILPL1Q5EBL4 403 aa20.85■□□□□ 0.93
LMNA-207ENST00000368301 FOXP4Q8IVH2 680 aaPredicted RBP20.85■□□□□ 0.93
LMNA-207ENST00000368301 DYNLL2Q96FJ2 89 aa20.85■□□□□ 0.93
LMNA-207ENST00000368301 WNT7AO00755 349 aa20.84■□□□□ 0.93
LMNA-207ENST00000368301 PRPF3O43395 683 aaKnown RBP20.84■□□□□ 0.93
LMNA-207ENST00000368301 LDHBP07195 334 aaKnown RBP20.84■□□□□ 0.93
LMNA-207ENST00000368301 GYS1P13807 737 aa20.84■□□□□ 0.93
LMNA-207ENST00000368301 VEGFAP15692 232 aaPredicted RBP20.84■□□□□ 0.93
LMNA-207ENST00000368301 NCAPHQ15003 741 aa20.84■□□□□ 0.93
LMNA-207ENST00000368301 TMTC3Q6ZXV5 915 aa20.84■□□□□ 0.93
LMNA-207ENST00000368301 SRBD1Q8N5C6 995 aaKnown RBP20.84■□□□□ 0.93
LMNA-207ENST00000368301 ARPP21Q9UBL0 812 aaPredicted RBP20.84■□□□□ 0.93
LMNA-207ENST00000368301 TUBE1Q9UJT0 475 aa20.84■□□□□ 0.93
LMNA-207ENST00000368301 LEMD3Q9Y2U8 911 aa20.84■□□□□ 0.93
LMNA-207ENST00000368301 XDHP47989 1333 aa20.84■□□□□ 0.93
LMNA-207ENST00000368301 PTPREP23469 700 aa20.84■□□□□ 0.93
LMNA-207ENST00000368301 SBK1Q52WX2 424 aa20.84■□□□□ 0.93
LMNA-207ENST00000368301 KRBA2Q6ZNG9 492 aa20.84■□□□□ 0.93
LMNA-207ENST00000368301 PHF20Q9BVI0 1012 aa20.84■□□□□ 0.93
LMNA-207ENST00000368301 BCL11BQ9C0K0 894 aaPredicted RBP20.84■□□□□ 0.93
LMNA-207ENST00000368301 ONECUT3O60422 494 aaPredicted RBP20.83■□□□□ 0.93
LMNA-207ENST00000368301 PPP2R5BQ15173 497 aa20.83■□□□□ 0.93
LMNA-207ENST00000368301 RCSD1Q6JBY9 416 aa20.83■□□□□ 0.93
LMNA-207ENST00000368301 USP49Q70CQ1 688 aa20.83■□□□□ 0.93
LMNA-207ENST00000368301 BPIFA3Q9BQP9 254 aa20.83■□□□□ 0.93
LMNA-207ENST00000368301 MKRN1Q9UHC7 482 aaKnown RBP20.83■□□□□ 0.93
LMNA-207ENST00000368301 CNTNAP5Q8WYK1 1306 aa20.83■□□□□ 0.93
LMNA-207ENST00000368301 DDAH1O94760 285 aa20.83■□□□□ 0.92
LMNA-207ENST00000368301 SPTY2D1Q68D10 685 aaPredicted RBP20.83■□□□□ 0.92
LMNA-207ENST00000368301 CNNM3Q8NE01 707 aa20.83■□□□□ 0.92
LMNA-207ENST00000368301 TSPY2A6NKD2 308 aa20.82■□□□□ 0.92
LMNA-207ENST00000368301 HSPA1LP34931 641 aa20.82■□□□□ 0.92
LMNA-207ENST00000368301 NPY5RQ15761 445 aa20.82■□□□□ 0.92
LMNA-207ENST00000368301 FILIP1Q7Z7B0 1213 aa20.82■□□□□ 0.92
LMNA-207ENST00000368301 RPGRQ92834 1020 aaKnown RBP20.82■□□□□ 0.92
LMNA-207ENST00000368301 RBM28Q9NW13 759 aaKnown RBP20.82■□□□□ 0.92
LMNA-207ENST00000368301 UBR3Q6ZT12 1888 aa20.82■□□□□ 0.92
LMNA-207ENST00000368301 ADAMTS3O15072 1205 aa20.82■□□□□ 0.92
LMNA-207ENST00000368301 WDR66Q8TBY9 1149 aa20.82■□□□□ 0.92
LMNA-207ENST00000368301 USP5P45974 858 aa20.81■□□□□ 0.92
LMNA-207ENST00000368301 HSD3B7Q9H2F3 369 aa20.81■□□□□ 0.92
LMNA-207ENST00000368301 SERPINB2P05120 415 aa20.81■□□□□ 0.92
LMNA-207ENST00000368301 CALM1P0DP23 149 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms