RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 UBE2FQ969M7 185 aa6.38□□□□□ -1.39
ECHDC1-201ENST00000368287 DNAJC25Q9H1X3 360 aa6.38□□□□□ -1.39
ECHDC1-201ENST00000368287 TMEM59LQ9UK28 342 aa6.38□□□□□ -1.39
ECHDC1-201ENST00000368287 ST14Q9Y5Y6 855 aa6.38□□□□□ -1.39
ECHDC1-201ENST00000368287 CAPN6Q9Y6Q1 641 aa6.38□□□□□ -1.39
ECHDC1-201ENST00000368287 CNTNAP4Q9C0A0 1308 aa6.38□□□□□ -1.39
ECHDC1-201ENST00000368287 EIF1AYO14602 144 aaKnown RBP6.37□□□□□ -1.39
ECHDC1-201ENST00000368287 DLG4P78352 724 aa6.37□□□□□ -1.39
ECHDC1-201ENST00000368287 ZNF252P-AS1Q0IIN9 211 aa6.37□□□□□ -1.39
ECHDC1-201ENST00000368287 RALGPS1Q5JS13 557 aa6.37□□□□□ -1.39
ECHDC1-201ENST00000368287 PRRT2Q7Z6L0 340 aaPredicted RBP6.37□□□□□ -1.39
ECHDC1-201ENST00000368287 PPP4R2Q9NY27 417 aa6.37□□□□□ -1.39
ECHDC1-201ENST00000368287 RTEL1Q9NZ71 1219 aa6.37□□□□□ -1.39
ECHDC1-201ENST00000368287 ZSWIM5Q9P217 1185 aa6.37□□□□□ -1.39
ECHDC1-201ENST00000368287 CNOT6Q9ULM6 557 aaKnown RBP6.37□□□□□ -1.39
ECHDC1-201ENST00000368287 NDUFB5O43674 189 aa6.36□□□□□ -1.39
ECHDC1-201ENST00000368287 HPXP02790 462 aa6.36□□□□□ -1.39
ECHDC1-201ENST00000368287 GGNQ86UU5 652 aa6.36□□□□□ -1.39
ECHDC1-201ENST00000368287 MARCH10Q8NA82 808 aaPredicted RBP6.36□□□□□ -1.39
ECHDC1-201ENST00000368287 MIPEPQ99797 713 aa6.36□□□□□ -1.39
ECHDC1-201ENST00000368287 MCOLN1Q9GZU1 580 aa6.36□□□□□ -1.39
ECHDC1-201ENST00000368287 SEMA7AO75326 666 aa6.35□□□□□ -1.39
ECHDC1-201ENST00000368287 CBX7O95931 251 aa6.35□□□□□ -1.39
ECHDC1-201ENST00000368287 XRCC5P13010 732 aaKnown RBP6.35□□□□□ -1.39
ECHDC1-201ENST00000368287 KRTAP10-2P60368 255 aa6.35□□□□□ -1.39
ECHDC1-201ENST00000368287 RING1Q06587 406 aa6.35□□□□□ -1.39
ECHDC1-201ENST00000368287 ZNF385BQ569K4 471 aa6.35□□□□□ -1.39
ECHDC1-201ENST00000368287 MPRIPQ6WCQ1 1025 aa6.35□□□□□ -1.39
ECHDC1-201ENST00000368287 CXorf38Q8TB03 319 aa6.35□□□□□ -1.39
ECHDC1-201ENST00000368287 ZNF507Q8TCN5 953 aa6.35□□□□□ -1.39
ECHDC1-201ENST00000368287 BORCS6Q96GS4 357 aa6.35□□□□□ -1.39
ECHDC1-201ENST00000368287 KRTAP9-8Q9BYQ0 159 aa6.35□□□□□ -1.39
ECHDC1-201ENST00000368287 RNF32Q9H0A6 362 aa6.35□□□□□ -1.39
ECHDC1-201ENST00000368287 CACNA2D2Q9NY47 1150 aa6.35□□□□□ -1.39
ECHDC1-201ENST00000368287 RFXAPO00287 272 aa6.34□□□□□ -1.39
ECHDC1-201ENST00000368287 BRD1O95696 1058 aa6.34□□□□□ -1.39
ECHDC1-201ENST00000368287 TRHRP34981 398 aaPredicted RBP6.34□□□□□ -1.39
ECHDC1-201ENST00000368287 SKOR2Q2VWA4 1001 aaPredicted RBP6.34□□□□□ -1.39
ECHDC1-201ENST00000368287 ZNF605Q86T29 641 aa6.34□□□□□ -1.39
ECHDC1-201ENST00000368287 IRF2BP1Q8IU81 584 aa6.34□□□□□ -1.39
ECHDC1-201ENST00000368287 EPS8L3Q8TE67 593 aaKnown RBP6.34□□□□□ -1.39
ECHDC1-201ENST00000368287 FAM129BQ96TA1 746 aa6.34□□□□□ -1.39
ECHDC1-201ENST00000368287 SLC6A17Q9H1V8 727 aa6.34□□□□□ -1.39
ECHDC1-201ENST00000368287 AKAP2Q9Y2D5 859 aa6.34□□□□□ -1.39
ECHDC1-201ENST00000368287 TRIM13O60858 407 aa6.33□□□□□ -1.4
ECHDC1-201ENST00000368287 ERICH6BQ5W0A0 696 aa6.33□□□□□ -1.4
ECHDC1-201ENST00000368287 TMEM132EQ6IEE7 984 aa6.33□□□□□ -1.4
ECHDC1-201ENST00000368287 ZNF746Q6NUN9 644 aaPredicted RBP6.33□□□□□ -1.4
ECHDC1-201ENST00000368287 AEBP1Q8IUX7 1158 aa6.33□□□□□ -1.4
ECHDC1-201ENST00000368287 TMEM151BQ8IW70 566 aa6.33□□□□□ -1.4
ECHDC1-201ENST00000368287 ELMO3Q96BJ8 720 aa6.33□□□□□ -1.4
ECHDC1-201ENST00000368287 KCTD3Q9Y597 815 aa6.33□□□□□ -1.4
ECHDC1-201ENST00000368287 MYOCOSA0A1B0GUC4 107 aa6.32□□□□□ -1.4
ECHDC1-201ENST00000368287 PATL2C9JE40 543 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-201ENST00000368287 PEX10O60683 326 aa6.32□□□□□ -1.4
ECHDC1-201ENST00000368287 ICMTO60725 284 aa6.32□□□□□ -1.4
ECHDC1-201ENST00000368287 TRIM37O94972 964 aa6.32□□□□□ -1.4
ECHDC1-201ENST00000368287 TMPRSS7Q7RTY8 843 aa6.32□□□□□ -1.4
ECHDC1-201ENST00000368287 GRIN3AQ8TCU5 1115 aa6.32□□□□□ -1.4
ECHDC1-201ENST00000368287 NIF3L1Q9GZT8 377 aa6.32□□□□□ -1.4
ECHDC1-201ENST00000368287 ADAMTS10Q9H324 1103 aa6.32□□□□□ -1.4
ECHDC1-201ENST00000368287 TMPRSS5Q9H3S3 457 aa6.32□□□□□ -1.4
ECHDC1-201ENST00000368287 PCDHA4Q9UN74 947 aa6.32□□□□□ -1.4
ECHDC1-201ENST00000368287 H3BRB1 525 aa6.31□□□□□ -1.4
ECHDC1-201ENST00000368287 SASH1O94885 1247 aa6.31□□□□□ -1.4
ECHDC1-201ENST00000368287 ESR1P03372 595 aa6.31□□□□□ -1.4
ECHDC1-201ENST00000368287 ADRB1P08588 477 aa6.31□□□□□ -1.4
ECHDC1-201ENST00000368287 CELA3BP08861 270 aa6.31□□□□□ -1.4
ECHDC1-201ENST00000368287 NFKB2Q00653 900 aa6.31□□□□□ -1.4
ECHDC1-201ENST00000368287 PHLDB3Q6NSJ2 640 aa6.31□□□□□ -1.4
ECHDC1-201ENST00000368287 GLYCTKQ8IVS8 523 aa6.31□□□□□ -1.4
ECHDC1-201ENST00000368287 MFSD2AQ8NA29 543 aa6.31□□□□□ -1.4
ECHDC1-201ENST00000368287 TUT1Q9H6E5 874 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-201ENST00000368287 NLRP2Q9NX02 1062 aa6.31□□□□□ -1.4
ECHDC1-201ENST00000368287 EGFL7Q9UHF1 273 aa6.31□□□□□ -1.4
ECHDC1-201ENST00000368287 SAMM50Q9Y512 469 aa6.31□□□□□ -1.4
ECHDC1-201ENST00000368287 PRAMEF27A3QJZ7 478 aa6.3□□□□□ -1.4
ECHDC1-201ENST00000368287 CREG2Q8IUH2 290 aa6.3□□□□□ -1.4
ECHDC1-201ENST00000368287 TMC1Q8TDI8 760 aa6.3□□□□□ -1.4
ECHDC1-201ENST00000368287 C19orf44Q9H6X5 657 aa6.3□□□□□ -1.4
ECHDC1-201ENST00000368287 FBRSQ9HAH7 460 aa6.3□□□□□ -1.4
ECHDC1-201ENST00000368287 TEX51A0A1B0GUA7 166 aa6.29□□□□□ -1.4
ECHDC1-201ENST00000368287 GPR182O15218 404 aa6.29□□□□□ -1.4
ECHDC1-201ENST00000368287 CYP7A1P22680 504 aa6.29□□□□□ -1.4
ECHDC1-201ENST00000368287 KIR3DL1P43629 444 aa6.29□□□□□ -1.4
ECHDC1-201ENST00000368287 TNK2Q07912 1038 aa6.29□□□□□ -1.4
ECHDC1-201ENST00000368287 SLBPQ14493 270 aaKnown RBP eCLIP6.29□□□□□ -1.4
ECHDC1-201ENST00000368287 LETMD1Q6P1Q0 360 aa6.29□□□□□ -1.4
ECHDC1-201ENST00000368287 LILRA2Q8N149 483 aa6.29□□□□□ -1.4
ECHDC1-201ENST00000368287 RIN3Q8TB24 985 aa6.29□□□□□ -1.4
ECHDC1-201ENST00000368287 COX4I2Q96KJ9 171 aa6.29□□□□□ -1.4
ECHDC1-201ENST00000368287 CITED4Q96RK1 184 aa6.29□□□□□ -1.4
ECHDC1-201ENST00000368287 BCO2Q9BYV7 579 aa6.29□□□□□ -1.4
ECHDC1-201ENST00000368287 XYLT2Q9H1B5 865 aa6.29□□□□□ -1.4
ECHDC1-201ENST00000368287 KCNA1Q09470 495 aa6.28□□□□□ -1.4
ECHDC1-201ENST00000368287 LLGL2Q6P1M3 1020 aa6.28□□□□□ -1.4
ECHDC1-201ENST00000368287 PI16Q6UXB8 463 aa6.28□□□□□ -1.4
ECHDC1-201ENST00000368287 PDZD8Q8NEN9 1154 aa6.28□□□□□ -1.4
ECHDC1-201ENST00000368287 INTS4Q96HW7 963 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-201ENST00000368287 NECAB3Q96P71 396 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms