RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 PPP2R5DQ14738 602 aa14.42□□□□□ -0.1
PTPRK-207ENST00000368226 CABP7Q86V35 215 aa14.42□□□□□ -0.1
PTPRK-207ENST00000368226 UBLCP1Q8WVY7 318 aaPredicted RBP14.42□□□□□ -0.1
PTPRK-207ENST00000368226 ZHX1Q9UKY1 873 aaPredicted RBP14.42□□□□□ -0.1
PTPRK-207ENST00000368226 ALAS1P13196 640 aa14.41□□□□□ -0.1
PTPRK-207ENST00000368226 PTPRTO14522 1441 aa14.41□□□□□ -0.1
PTPRK-207ENST00000368226 SMCO2A6NFE2 343 aa14.41□□□□□ -0.1
PTPRK-207ENST00000368226 CRKLP46109 303 aaKnown RBP14.41□□□□□ -0.1
PTPRK-207ENST00000368226 SEL1L2Q5TEA6 688 aa14.41□□□□□ -0.1
PTPRK-207ENST00000368226 METTL13Q8N6R0 699 aa14.41□□□□□ -0.1
PTPRK-207ENST00000368226 PLEKHA4Q9H4M7 779 aa14.41□□□□□ -0.1
PTPRK-207ENST00000368226 CLRN2A0PK11 232 aa14.41□□□□□ -0.1
PTPRK-207ENST00000368226 ATP2A1O14983 1001 aa14.41□□□□□ -0.1
PTPRK-207ENST00000368226 BTDP43251 543 aa14.41□□□□□ -0.1
PTPRK-207ENST00000368226 PNOCQ13519 176 aa14.41□□□□□ -0.1
PTPRK-207ENST00000368226 RBSNQ9H1K0 784 aa14.41□□□□□ -0.1
PTPRK-207ENST00000368226 ZFYVE16Q7Z3T8 1539 aa14.41□□□□□ -0.1
PTPRK-207ENST00000368226 IBTKQ9P2D0 1353 aaPredicted RBP14.41□□□□□ -0.1
PTPRK-207ENST00000368226 ADORA1P30542 326 aa14.41□□□□□ -0.1
PTPRK-207ENST00000368226 PAK1Q13153 545 aa14.41□□□□□ -0.1
PTPRK-207ENST00000368226 RNF169Q8NCN4 708 aa14.41□□□□□ -0.1
PTPRK-207ENST00000368226 DNM3Q9UQ16 869 aa14.41□□□□□ -0.1
PTPRK-207ENST00000368226 ZNF202O95125 648 aa14.41□□□□□ -0.1
PTPRK-207ENST00000368226 ASIC2Q16515 512 aa14.41□□□□□ -0.1
PTPRK-207ENST00000368226 FAM47CQ5HY64 1035 aa14.41□□□□□ -0.1
PTPRK-207ENST00000368226 C17orf53Q8N3J3 647 aaPredicted RBP14.41□□□□□ -0.1
PTPRK-207ENST00000368226 ZNF526Q8TF50 670 aaPredicted RBP14.41□□□□□ -0.1
PTPRK-207ENST00000368226 GTPBP4Q9BZE4 634 aaKnown RBP14.41□□□□□ -0.1
PTPRK-207ENST00000368226 TXNDC16Q9P2K2 825 aa14.41□□□□□ -0.1
PTPRK-207ENST00000368226 SLU7O95391 586 aaKnown RBP14.4□□□□□ -0.1
PTPRK-207ENST00000368226 FAM169AQ9Y6X4 670 aa14.4□□□□□ -0.1
PTPRK-207ENST00000368226 SREK1Q8WXA9 508 aaKnown RBP14.4□□□□□ -0.1
PTPRK-207ENST00000368226 EAF2Q96CJ1 260 aaPredicted RBP14.4□□□□□ -0.1
PTPRK-207ENST00000368226 PRIMPOLQ96LW4 560 aa14.4□□□□□ -0.1
PTPRK-207ENST00000368226 CCDC77Q9BR77 488 aa14.4□□□□□ -0.1
PTPRK-207ENST00000368226 USP44Q9H0E7 712 aa14.4□□□□□ -0.1
PTPRK-207ENST00000368226 CEP170Q5SW79 1584 aa14.4□□□□□ -0.1
PTPRK-207ENST00000368226 ME3Q16798 604 aa14.4□□□□□ -0.1
PTPRK-207ENST00000368226 BRDTQ58F21 947 aaPredicted RBP14.4□□□□□ -0.1
PTPRK-207ENST00000368226 FBF1Q8TES7 1133 aa14.4□□□□□ -0.1
PTPRK-207ENST00000368226 TRIM31Q9BZY9 425 aa14.4□□□□□ -0.1
PTPRK-207ENST00000368226 RSPH14Q9UHP6 348 aa14.4□□□□□ -0.1
PTPRK-207ENST00000368226 ZKSCAN5Q9Y2L8 839 aa14.4□□□□□ -0.1
PTPRK-207ENST00000368226 ZEB2O60315 1214 aa14.4□□□□□ -0.1
PTPRK-207ENST00000368226 SPOUT1Q5T280 376 aaKnown RBP14.4□□□□□ -0.1
PTPRK-207ENST00000368226 GLG1Q92896 1179 aa14.4□□□□□ -0.1
PTPRK-207ENST00000368226 KIAA0232Q92628 1395 aa14.4□□□□□ -0.1
PTPRK-207ENST00000368226 KDRP35968 1356 aa14.4□□□□□ -0.1
PTPRK-207ENST00000368226 TMEM94Q12767 1356 aa14.4□□□□□ -0.1
PTPRK-207ENST00000368226 CNGA1P29973 690 aa14.4□□□□□ -0.1
PTPRK-207ENST00000368226 KRT25Q7Z3Z0 450 aa14.4□□□□□ -0.1
PTPRK-207ENST00000368226 CNGA4Q8IV77 575 aa14.4□□□□□ -0.1
PTPRK-207ENST00000368226 KIFAP3Q92845 792 aa14.4□□□□□ -0.1
PTPRK-207ENST00000368226 ANO3Q9BYT9 981 aa14.4□□□□□ -0.1
PTPRK-207ENST00000368226 EXOC3O60645 756 aa14.39□□□□□ -0.11
PTPRK-207ENST00000368226 IFNL3Q8IZI9 196 aa14.39□□□□□ -0.11
PTPRK-207ENST00000368226 LOC102724428A0A0B4J2F2 783 aa14.39□□□□□ -0.11
PTPRK-207ENST00000368226 SIK1P57059 783 aa14.39□□□□□ -0.11
PTPRK-207ENST00000368226 ZNF654Q8IZM8 581 aa14.39□□□□□ -0.11
PTPRK-207ENST00000368226 ZBTB38Q8NAP3 1195 aaPredicted RBP14.39□□□□□ -0.11
PTPRK-207ENST00000368226 DAPK3O43293 454 aa14.39□□□□□ -0.11
PTPRK-207ENST00000368226 ARHGAP44Q17R89 818 aa14.39□□□□□ -0.11
PTPRK-207ENST00000368226 FAM102BQ5T8I3 360 aa14.39□□□□□ -0.11
PTPRK-207ENST00000368226 UTP14CQ5TAP6 766 aaKnown RBP14.39□□□□□ -0.11
PTPRK-207ENST00000368226 ARHGEF16Q5VV41 709 aa14.39□□□□□ -0.11
PTPRK-207ENST00000368226 NELFBQ8WX92 580 aa14.39□□□□□ -0.11
PTPRK-207ENST00000368226 CSADQ9Y600 493 aa14.39□□□□□ -0.11
PTPRK-207ENST00000368226 TECP42680 631 aa14.39□□□□□ -0.11
PTPRK-207ENST00000368226 PRR16Q569H4 304 aa14.39□□□□□ -0.11
PTPRK-207ENST00000368226 REXO1Q8N1G1 1221 aaKnown RBP14.39□□□□□ -0.11
PTPRK-207ENST00000368226 BEGAINQ9BUH8 593 aa14.39□□□□□ -0.11
PTPRK-207ENST00000368226 VPS18Q9P253 973 aa14.39□□□□□ -0.11
PTPRK-207ENST00000368226 CUTAO60888 179 aa14.38□□□□□ -0.11
PTPRK-207ENST00000368226 ATP5JP18859 108 aa14.38□□□□□ -0.11
PTPRK-207ENST00000368226 SPICE1Q8N0Z3 855 aa14.38□□□□□ -0.11
PTPRK-207ENST00000368226 ZSCAN10Q96SZ4 725 aaPredicted RBP14.38□□□□□ -0.11
PTPRK-207ENST00000368226 TLR7Q9NYK1 1049 aaKnown RBP14.38□□□□□ -0.11
PTPRK-207ENST00000368226 ARPP21Q9UBL0 812 aaPredicted RBP14.38□□□□□ -0.11
PTPRK-207ENST00000368226 THRAP3Q9Y2W1 955 aaKnown RBP14.38□□□□□ -0.11
PTPRK-207ENST00000368226 CETN3O15182 167 aa14.38□□□□□ -0.11
PTPRK-207ENST00000368226 GSPT1P15170 499 aaKnown RBP14.38□□□□□ -0.11
PTPRK-207ENST00000368226 PSMC4P43686 418 aa14.38□□□□□ -0.11
PTPRK-207ENST00000368226 FANCCQ00597 558 aa14.38□□□□□ -0.11
PTPRK-207ENST00000368226 LLPHQ9BRT6 129 aaKnown RBP14.38□□□□□ -0.11
PTPRK-207ENST00000368226 MYO1AQ9UBC5 1043 aa14.38□□□□□ -0.11
PTPRK-207ENST00000368226 PLEKHG3A1L390 1219 aa14.38□□□□□ -0.11
PTPRK-207ENST00000368226 E7EVH7 732 aa14.38□□□□□ -0.11
PTPRK-207ENST00000368226 PHKA1P46020 1223 aa14.38□□□□□ -0.11
PTPRK-207ENST00000368226 SERTAD1Q9UHV2 236 aa14.38□□□□□ -0.11
PTPRK-207ENST00000368226 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.38□□□□□ -0.11
PTPRK-207ENST00000368226 METP08581 1390 aa14.38□□□□□ -0.11
PTPRK-207ENST00000368226 CD19P15391 556 aa14.38□□□□□ -0.11
PTPRK-207ENST00000368226 ZBTB16Q05516 673 aa14.38□□□□□ -0.11
PTPRK-207ENST00000368226 POSTNQ15063 836 aa14.38□□□□□ -0.11
PTPRK-207ENST00000368226 CCDC117Q8IWD4 279 aaPredicted RBP14.38□□□□□ -0.11
PTPRK-207ENST00000368226 TBC1D22AQ8WUA7 517 aa14.38□□□□□ -0.11
PTPRK-207ENST00000368226 CLSTN2Q9H4D0 955 aa14.38□□□□□ -0.11
PTPRK-207ENST00000368226 UBXN2AP68543 259 aa14.38□□□□□ -0.11
PTPRK-207ENST00000368226 PTPROQ16827 1216 aa14.38□□□□□ -0.11
PTPRK-207ENST00000368226 EXOC7Q9UPT5 735 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms