RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 ANKRD20A12PQ8NF67 263 aa9.3□□□□□ -0.92
CD46-208ENST00000367042 PCMTD1Q96MG8 357 aaPredicted RBP9.3□□□□□ -0.92
CD46-208ENST00000367042 NACAP1Q9BZK3 213 aa9.3□□□□□ -0.92
CD46-208ENST00000367042 CEP131Q9UPN4 1083 aa9.3□□□□□ -0.92
CD46-208ENST00000367042 SLC4A4Q9Y6R1 1079 aa9.3□□□□□ -0.92
CD46-208ENST00000367042 COL18A1P39060 1754 aa9.3□□□□□ -0.92
CD46-208ENST00000367042 CTAGE15A4D2H0 777 aa9.3□□□□□ -0.92
CD46-208ENST00000367042 ANKRD65E5RJM6 399 aa9.3□□□□□ -0.92
CD46-208ENST00000367042 CTAGE8P0CG41 777 aa9.3□□□□□ -0.92
CD46-208ENST00000367042 XBP1P17861 261 aa9.3□□□□□ -0.92
CD46-208ENST00000367042 EVA1CP58658 441 aa9.3□□□□□ -0.92
CD46-208ENST00000367042 MAP3K12Q12852 859 aa9.3□□□□□ -0.92
CD46-208ENST00000367042 TCIRG1Q13488 830 aa9.3□□□□□ -0.92
CD46-208ENST00000367042 TSR1Q2NL82 804 aaKnown RBP9.3□□□□□ -0.92
CD46-208ENST00000367042 CTAGE6Q86UF2 777 aa9.3□□□□□ -0.92
CD46-208ENST00000367042 CTAGE4Q8IX94 777 aa9.3□□□□□ -0.92
CD46-208ENST00000367042 EEF2KMTQ96G04 330 aa9.3□□□□□ -0.92
CD46-208ENST00000367042 CAPZA3Q96KX2 299 aa9.3□□□□□ -0.92
CD46-208ENST00000367042 SLF1Q9BQI6 1058 aa9.3□□□□□ -0.92
CD46-208ENST00000367042 LY9Q9HBG7 655 aa9.3□□□□□ -0.92
CD46-208ENST00000367042 MEGF6O75095 1541 aa9.3□□□□□ -0.92
CD46-208ENST00000367042 FAM205CA6NFA0 338 aa9.3□□□□□ -0.92
CD46-208ENST00000367042 MMP1P03956 469 aa9.3□□□□□ -0.92
CD46-208ENST00000367042 SLC4A8Q2Y0W8 1093 aa9.3□□□□□ -0.92
CD46-208ENST00000367042 RRAGBQ5VZM2 374 aa9.3□□□□□ -0.92
CD46-208ENST00000367042 IFNL3Q8IZI9 196 aa9.3□□□□□ -0.92
CD46-208ENST00000367042 CEP112Q8N8E3 955 aa9.3□□□□□ -0.92
CD46-208ENST00000367042 CAGE1Q8TC20 777 aa9.3□□□□□ -0.92
CD46-208ENST00000367042 NBPF3Q9H094 633 aa9.3□□□□□ -0.92
CD46-208ENST00000367042 PLEKHA4Q9H4M7 779 aa9.3□□□□□ -0.92
CD46-208ENST00000367042 FAM53CQ9NYF3 392 aa9.3□□□□□ -0.92
CD46-208ENST00000367042 TRIM75PA6NK02 468 aa9.29□□□□□ -0.92
CD46-208ENST00000367042 TRIM66O15016 1216 aa9.29□□□□□ -0.92
CD46-208ENST00000367042 CDC25AP30304 524 aa9.29□□□□□ -0.92
CD46-208ENST00000367042 RAD9BQ6WBX8 426 aa9.29□□□□□ -0.92
CD46-208ENST00000367042 SRGAP1Q7Z6B7 1085 aa9.29□□□□□ -0.92
CD46-208ENST00000367042 TMEM139Q8IV31 216 aa9.29□□□□□ -0.92
CD46-208ENST00000367042 RGS22Q8NE09 1264 aa9.29□□□□□ -0.92
CD46-208ENST00000367042 ENOX1Q8TC92 643 aaKnown RBP9.29□□□□□ -0.92
CD46-208ENST00000367042 TAB2Q9NYJ8 693 aa9.29□□□□□ -0.92
CD46-208ENST00000367042 CPDO75976 1380 aa9.29□□□□□ -0.92
CD46-208ENST00000367042 ADAMTS7Q9UKP4 1686 aa9.29□□□□□ -0.92
CD46-208ENST00000367042 H3BQF6 201 aa9.29□□□□□ -0.92
CD46-208ENST00000367042 ENC1O14682 589 aa9.29□□□□□ -0.92
CD46-208ENST00000367042 N4BP1O75113 896 aaKnown RBP9.29□□□□□ -0.92
CD46-208ENST00000367042 PLCD1P51178 756 aa9.29□□□□□ -0.92
CD46-208ENST00000367042 KANK3Q6NY19 840 aa9.29□□□□□ -0.92
CD46-208ENST00000367042 HDXQ7Z353 690 aa9.29□□□□□ -0.92
CD46-208ENST00000367042 DNAJC10Q8IXB1 793 aa9.29□□□□□ -0.92
CD46-208ENST00000367042 TEX13AQ9BXU3 409 aaPredicted RBP9.29□□□□□ -0.92
CD46-208ENST00000367042 ABCB6Q9NP58 842 aa9.29□□□□□ -0.92
CD46-208ENST00000367042 TMOD3Q9NYL9 352 aa9.29□□□□□ -0.92
CD46-208ENST00000367042 RSPH14Q9UHP6 348 aa9.29□□□□□ -0.92
CD46-208ENST00000367042 FAN1Q9Y2M0 1017 aa9.29□□□□□ -0.92
CD46-208ENST00000367042 SIPA1L3O60292 1781 aaPredicted RBP9.29□□□□□ -0.92
CD46-208ENST00000367042 CCDC151A5D8V7 595 aa9.28□□□□□ -0.92
CD46-208ENST00000367042 IRS4O14654 1257 aaPredicted RBP9.28□□□□□ -0.92
CD46-208ENST00000367042 GPIHBP1Q8IV16 184 aa9.28□□□□□ -0.92
CD46-208ENST00000367042 IGDCC4Q8TDY8 1250 aa9.28□□□□□ -0.92
CD46-208ENST00000367042 FUT8Q9BYC5 575 aa9.28□□□□□ -0.92
CD46-208ENST00000367042 CDC23Q9UJX2 597 aa9.28□□□□□ -0.92
CD46-208ENST00000367042 LMTK3Q96Q04 1460 aa9.28□□□□□ -0.92
CD46-208ENST00000367042 CCDC196A0A1B0GTZ2 297 aa9.28□□□□□ -0.92
CD46-208ENST00000367042 FMNL1O95466 1100 aaPredicted RBP9.28□□□□□ -0.92
CD46-208ENST00000367042 PTPREP23469 700 aa9.28□□□□□ -0.92
CD46-208ENST00000367042 TOB1P50616 345 aaPredicted RBP9.28□□□□□ -0.92
CD46-208ENST00000367042 HSPA2P54652 639 aa9.28□□□□□ -0.92
CD46-208ENST00000367042 AKNAD1Q5T1N1 836 aa9.28□□□□□ -0.92
CD46-208ENST00000367042 NCAPH2Q6IBW4 605 aa9.28□□□□□ -0.92
CD46-208ENST00000367042 SYMPKQ92797 1274 aaKnown RBP9.28□□□□□ -0.92
CD46-208ENST00000367042 KRT23Q9C075 422 aa9.28□□□□□ -0.92
CD46-208ENST00000367042 SEC31BQ9NQW1 1179 aa9.28□□□□□ -0.92
CD46-208ENST00000367042 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.28□□□□□ -0.92
CD46-208ENST00000367042 ADGRG1Q9Y653 693 aa9.28□□□□□ -0.92
CD46-208ENST00000367042 OVOS2A0A0G2JMS6 1433 aa9.28□□□□□ -0.92
CD46-208ENST00000367042 DEXIO95424 95 aa9.28□□□□□ -0.92
CD46-208ENST00000367042 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.28□□□□□ -0.92
CD46-208ENST00000367042 SDR42E1Q8WUS8 393 aa9.28□□□□□ -0.92
CD46-208ENST00000367042 KIFC2Q96AC6 838 aa9.28□□□□□ -0.92
CD46-208ENST00000367042 RASSF4Q9H2L5 321 aa9.28□□□□□ -0.92
CD46-208ENST00000367042 BRMS1Q9HCU9 246 aa9.28□□□□□ -0.92
CD46-208ENST00000367042 FBXO2Q9UK22 296 aaPredicted RBP9.28□□□□□ -0.92
CD46-208ENST00000367042 V9GY48 417 aaPredicted RBP9.28□□□□□ -0.92
CD46-208ENST00000367042 ATP8B1O43520 1251 aa9.27□□□□□ -0.93
CD46-208ENST00000367042 ZMYND10O75800 440 aa9.27□□□□□ -0.93
CD46-208ENST00000367042 KRT9P35527 623 aa9.27□□□□□ -0.93
CD46-208ENST00000367042 MORC3Q14149 939 aa9.27□□□□□ -0.93
CD46-208ENST00000367042 BRD3Q15059 726 aa9.27□□□□□ -0.93
CD46-208ENST00000367042 NTRK3Q16288 839 aa9.27□□□□□ -0.93
CD46-208ENST00000367042 CNGA4Q8IV77 575 aa9.27□□□□□ -0.93
CD46-208ENST00000367042 STRBPQ96SI9 672 aaKnown RBP9.27□□□□□ -0.93
CD46-208ENST00000367042 PNKPQ96T60 521 aa9.27□□□□□ -0.93
CD46-208ENST00000367042 PLIN2Q99541 437 aa9.27□□□□□ -0.93
CD46-208ENST00000367042 NAPGQ99747 312 aaPredicted RBP9.27□□□□□ -0.93
CD46-208ENST00000367042 RABEP2Q9H5N1 569 aa9.27□□□□□ -0.93
CD46-208ENST00000367042 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.27□□□□□ -0.936e-9■■□□□ 12.6
CD46-208ENST00000367042 AFDNP55196 1824 aaKnown RBP9.27□□□□□ -0.93
CD46-208ENST00000367042 LAMA4Q16363 1823 aa9.27□□□□□ -0.93
CD46-208ENST00000367042 IPO7O95373 1038 aaKnown RBP9.27□□□□□ -0.93
CD46-208ENST00000367042 IFNAR1P17181 557 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms