RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 PRKAB2O43741 272 aa12.68□□□□□ -0.38
H3F3A-202ENST00000366814 KDM4AO75164 1064 aa12.68□□□□□ -0.38
H3F3A-202ENST00000366814 PCP11498 1178 aaKnown RBP12.68□□□□□ -0.38
H3F3A-202ENST00000366814 PPARAQ07869 468 aa12.68□□□□□ -0.38
H3F3A-202ENST00000366814 CCDC173Q0VFZ6 552 aa12.68□□□□□ -0.38
H3F3A-202ENST00000366814 DPF2Q92785 391 aa12.68□□□□□ -0.38
H3F3A-202ENST00000366814 C8orf76Q96K31 380 aa12.68□□□□□ -0.38
H3F3A-202ENST00000366814 GPHNQ9NQX3 736 aaPredicted RBP12.68□□□□□ -0.38
H3F3A-202ENST00000366814 ORC3Q9UBD5 711 aaPredicted RBP12.68□□□□□ -0.38
H3F3A-202ENST00000366814 SCN9AQ15858 1988 aa12.67□□□□□ -0.38
H3F3A-202ENST00000366814 ITGBL1O95965 494 aaPredicted RBP12.67□□□□□ -0.38
H3F3A-202ENST00000366814 RPS12P25398 132 aaKnown RBP12.67□□□□□ -0.38
H3F3A-202ENST00000366814 CHAF1AQ13111 956 aaPredicted RBP12.67□□□□□ -0.38
H3F3A-202ENST00000366814 RRP12Q5JTH9 1297 aaKnown RBP12.67□□□□□ -0.38
H3F3A-202ENST00000366814 APOA5Q6Q788 366 aa12.67□□□□□ -0.38
H3F3A-202ENST00000366814 PODNQ7Z5L7 613 aa12.67□□□□□ -0.38
H3F3A-202ENST00000366814 TTC6Q86TZ1 520 aa12.67□□□□□ -0.38
H3F3A-202ENST00000366814 MICALL2Q8IY33 904 aa12.67□□□□□ -0.38
H3F3A-202ENST00000366814 DNAJC5GQ8N7S2 189 aa12.67□□□□□ -0.38
H3F3A-202ENST00000366814 WDR66Q8TBY9 1149 aa12.67□□□□□ -0.38
H3F3A-202ENST00000366814 RIOK1Q9BRS2 568 aaKnown RBP12.67□□□□□ -0.38
H3F3A-202ENST00000366814 CRNKL1Q9BZJ0 848 aaKnown RBP12.67□□□□□ -0.38
H3F3A-202ENST00000366814 ANAPC4Q9UJX5 808 aa12.67□□□□□ -0.38
H3F3A-202ENST00000366814 HPS5Q9UPZ3 1129 aa12.67□□□□□ -0.38
H3F3A-202ENST00000366814 SLC12A7Q9Y666 1083 aa12.67□□□□□ -0.38
H3F3A-202ENST00000366814 MINDY4BA8MYZ0 360 aa12.66□□□□□ -0.38
H3F3A-202ENST00000366814 VIL1P09327 827 aaKnown RBP12.66□□□□□ -0.38
H3F3A-202ENST00000366814 TPRNQ4KMQ1 711 aa12.66□□□□□ -0.38
H3F3A-202ENST00000366814 DZIP1Q86YF9 867 aaKnown RBP12.66□□□□□ -0.38
H3F3A-202ENST00000366814 IGDCC4Q8TDY8 1250 aa12.66□□□□□ -0.38
H3F3A-202ENST00000366814 LEO1Q8WVC0 666 aaPredicted RBP12.66□□□□□ -0.38
H3F3A-202ENST00000366814 ESR2Q92731 530 aa12.66□□□□□ -0.38
H3F3A-202ENST00000366814 NSUN4Q96CB9 384 aaKnown RBP12.66□□□□□ -0.38
H3F3A-202ENST00000366814 TRIM44Q96DX7 344 aaPredicted RBP12.66□□□□□ -0.38
H3F3A-202ENST00000366814 UBAC1Q9BSL1 405 aa12.66□□□□□ -0.38
H3F3A-202ENST00000366814 ZSWIM5Q9P217 1185 aa12.66□□□□□ -0.38
H3F3A-202ENST00000366814 ADAMTSL1Q8N6G6 1762 aa12.66□□□□□ -0.38
H3F3A-202ENST00000366814 SHTN1A0MZ66 631 aa12.65□□□□□ -0.38
H3F3A-202ENST00000366814 USP17L3A6NCW0 530 aa12.65□□□□□ -0.38
H3F3A-202ENST00000366814 USP17L4A6NCW7 530 aa12.65□□□□□ -0.38
H3F3A-202ENST00000366814 GOLGA8AA7E2F4 631 aa12.65□□□□□ -0.38
H3F3A-202ENST00000366814 STK25O00506 426 aa12.65□□□□□ -0.38
H3F3A-202ENST00000366814 SLC3A2P08195 630 aaKnown RBP12.65□□□□□ -0.38
H3F3A-202ENST00000366814 KLRK1P26718 216 aa12.65□□□□□ -0.38
H3F3A-202ENST00000366814 FOSBP53539 338 aa12.65□□□□□ -0.38
H3F3A-202ENST00000366814 GSTO1P78417 241 aa12.65□□□□□ -0.38
H3F3A-202ENST00000366814 MECOMQ03112 1051 aa12.65□□□□□ -0.38
H3F3A-202ENST00000366814 WTAPQ15007 396 aa12.65□□□□□ -0.38
H3F3A-202ENST00000366814 RBM26Q5T8P6 1007 aaKnown RBP12.65□□□□□ -0.38
H3F3A-202ENST00000366814 FAM173BQ6P4H8 233 aa12.65□□□□□ -0.38
H3F3A-202ENST00000366814 USP17L1Q7RTZ2 530 aa12.65□□□□□ -0.38
H3F3A-202ENST00000366814 ADGRA1Q86SQ6 560 aa12.65□□□□□ -0.38
H3F3A-202ENST00000366814 MICU3Q86XE3 530 aa12.65□□□□□ -0.38
H3F3A-202ENST00000366814 SDR42E1Q8WUS8 393 aa12.65□□□□□ -0.38
H3F3A-202ENST00000366814 FBXW7Q969H0 707 aa12.65□□□□□ -0.38
H3F3A-202ENST00000366814 COA1Q9GZY4 146 aa12.65□□□□□ -0.38
H3F3A-202ENST00000366814 LY9Q9HBG7 655 aa12.65□□□□□ -0.38
H3F3A-202ENST00000366814 TFIP11Q9UBB9 837 aaKnown RBP12.65□□□□□ -0.38
H3F3A-202ENST00000366814 FARP1Q9Y4F1 1045 aaPredicted RBP12.65□□□□□ -0.38
H3F3A-202ENST00000366814 CEP350Q5VT06 3117 aa12.65□□□□□ -0.38
H3F3A-202ENST00000366814 PASKQ96RG2 1323 aa12.65□□□□□ -0.38
H3F3A-202ENST00000366814 CCDC196A0A1B0GTZ2 297 aa12.65□□□□□ -0.38
H3F3A-202ENST00000366814 RCAN1P53805 252 aa12.65□□□□□ -0.38
H3F3A-202ENST00000366814 C15orf52Q6ZUT6 534 aaKnown RBP12.65□□□□□ -0.38
H3F3A-202ENST00000366814 SAMD7Q7Z3H4 446 aa12.65□□□□□ -0.38
H3F3A-202ENST00000366814 BRAPQ7Z569 592 aa12.65□□□□□ -0.38
H3F3A-202ENST00000366814 TXNRD3Q86VQ6 643 aa12.65□□□□□ -0.38
H3F3A-202ENST00000366814 BICD2Q8TD16 824 aa12.65□□□□□ -0.38
H3F3A-202ENST00000366814 WASF1Q92558 559 aa12.65□□□□□ -0.38
H3F3A-202ENST00000366814 KLRG1Q96E93 195 aa12.65□□□□□ -0.38
H3F3A-202ENST00000366814 NOL10Q9BSC4 688 aaKnown RBP12.65□□□□□ -0.38
H3F3A-202ENST00000366814 ATP8A2Q9NTI2 1148 aa12.65□□□□□ -0.38
H3F3A-202ENST00000366814 POLR2AP24928 1970 aaKnown RBP12.64□□□□□ -0.39
H3F3A-202ENST00000366814 LDHBP07195 334 aaKnown RBP12.64□□□□□ -0.39
H3F3A-202ENST00000366814 FDPSP14324 419 aaKnown RBP12.64□□□□□ -0.39
H3F3A-202ENST00000366814 TRIM29Q14134 588 aa12.64□□□□□ -0.39
H3F3A-202ENST00000366814 TBC1D10BQ4KMP7 808 aaPredicted RBP12.64□□□□□ -0.39
H3F3A-202ENST00000366814 RSBN1LQ6PCB5 846 aaPredicted RBP12.64□□□□□ -0.39
H3F3A-202ENST00000366814 CERS3Q8IU89 383 aa12.64□□□□□ -0.39
H3F3A-202ENST00000366814 FBXO18Q8NFZ0 1043 aa12.64□□□□□ -0.39
H3F3A-202ENST00000366814 TRPM4Q8TD43 1214 aa12.64□□□□□ -0.39
H3F3A-202ENST00000366814 RBSNQ9H1K0 784 aa12.64□□□□□ -0.39
H3F3A-202ENST00000366814 TSPYL2Q9H2G4 693 aaPredicted RBP12.64□□□□□ -0.39
H3F3A-202ENST00000366814 DDX19AQ9NUU7 478 aaKnown RBP12.64□□□□□ -0.39
H3F3A-202ENST00000366814 TMEM88BA6NKF7 163 aa12.63□□□□□ -0.39
H3F3A-202ENST00000366814 HIRAP54198 1017 aaPredicted RBP12.63□□□□□ -0.39
H3F3A-202ENST00000366814 DYNLL1P63167 89 aaKnown RBP12.63□□□□□ -0.39
H3F3A-202ENST00000366814 GUCY1B3Q02153 619 aa12.63□□□□□ -0.39
H3F3A-202ENST00000366814 RAB11FIP4Q86YS3 637 aa12.63□□□□□ -0.39
H3F3A-202ENST00000366814 AGBL3Q8NEM8 1001 aa12.63□□□□□ -0.39
H3F3A-202ENST00000366814 ARPP21Q9UBL0 812 aaPredicted RBP12.63□□□□□ -0.39
H3F3A-202ENST00000366814 PSME4Q14997 1843 aa12.63□□□□□ -0.39
H3F3A-202ENST00000366814 NID2Q14112 1375 aa12.63□□□□□ -0.39
H3F3A-202ENST00000366814 STK36Q9NRP7 1315 aa12.63□□□□□ -0.39
H3F3A-202ENST00000366814 IRS2Q9Y4H2 1338 aa12.63□□□□□ -0.39
H3F3A-202ENST00000366814 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.63□□□□□ -0.39
H3F3A-202ENST00000366814 LDHCP07864 332 aa12.63□□□□□ -0.39
H3F3A-202ENST00000366814 NT5C2P49902 561 aa12.63□□□□□ -0.39
H3F3A-202ENST00000366814 PPP2R5BQ15173 497 aa12.63□□□□□ -0.39
H3F3A-202ENST00000366814 IQCA1Q86XH1 822 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms