RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 NEFLP07196 543 aa15.17■□□□□ 0.02
MRPL55-209ENST00000366735 SH3D19Q5HYK7 790 aa15.17■□□□□ 0.02
MRPL55-209ENST00000366735 CCDC84Q86UT8 332 aaPredicted RBP15.17■□□□□ 0.02
MRPL55-209ENST00000366735 CERS3Q8IU89 383 aa15.17■□□□□ 0.02
MRPL55-209ENST00000366735 ZNF384Q8TF68 577 aa15.17■□□□□ 0.02
MRPL55-209ENST00000366735 AATFQ9NY61 560 aaKnown RBP eCLIP15.17■□□□□ 0.02
MRPL55-209ENST00000366735 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.17■□□□□ 0.02
MRPL55-209ENST00000366735 SSUH2Q9Y2M2 353 aa15.17■□□□□ 0.02
MRPL55-209ENST00000366735 EVI5O60447 810 aa15.16■□□□□ 0.02
MRPL55-209ENST00000366735 HLA-DOAP06340 250 aa15.16■□□□□ 0.02
MRPL55-209ENST00000366735 TNNI3KQ59H18 835 aa15.16■□□□□ 0.02
MRPL55-209ENST00000366735 ZKSCAN2Q63HK3 967 aa15.16■□□□□ 0.02
MRPL55-209ENST00000366735 FTSJ3Q8IY81 847 aaKnown RBP15.16■□□□□ 0.02
MRPL55-209ENST00000366735 ANKLE1Q8NAG6 615 aa15.16■□□□□ 0.02
MRPL55-209ENST00000366735 SH3RF3Q8TEJ3 882 aaPredicted RBP15.16■□□□□ 0.02
MRPL55-209ENST00000366735 GTF3C2Q8WUA4 911 aaPredicted RBP15.16■□□□□ 0.02
MRPL55-209ENST00000366735 CLUAP1Q96AJ1 413 aa15.16■□□□□ 0.02
MRPL55-209ENST00000366735 DEFB118Q96PH6 123 aa15.16■□□□□ 0.02
MRPL55-209ENST00000366735 PAK6Q9NQU5 681 aaPredicted RBP15.16■□□□□ 0.02
MRPL55-209ENST00000366735 FPGT-TNNI3KV9GXZ4 949 aa15.16■□□□□ 0.02
MRPL55-209ENST00000366735 FLT1P17948 1338 aa15.16■□□□□ 0.02
MRPL55-209ENST00000366735 A0A1W2PPC1 479 aa15.15■□□□□ 0.02
MRPL55-209ENST00000366735 C19orf81C9J6K1 198 aa15.15■□□□□ 0.02
MRPL55-209ENST00000366735 SLURP2P0DP57 97 aa15.15■□□□□ 0.02
MRPL55-209ENST00000366735 WDR18Q9BV38 432 aa15.15■□□□□ 0.02
MRPL55-209ENST00000366735 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.15■□□□□ 0.02
MRPL55-209ENST00000366735 ASCC2Q9H1I8 757 aaPredicted RBP15.15■□□□□ 0.02
MRPL55-209ENST00000366735 RCAN3Q9UKA8 241 aa15.15■□□□□ 0.02
MRPL55-209ENST00000366735 ZBTB7BO15156 539 aaPredicted RBP15.14■□□□□ 0.01
MRPL55-209ENST00000366735 BACE1P56817 501 aa15.14■□□□□ 0.01
MRPL55-209ENST00000366735 PPP4CP60510 307 aa15.14■□□□□ 0.01
MRPL55-209ENST00000366735 MTMR2Q13614 643 aa15.14■□□□□ 0.01
MRPL55-209ENST00000366735 PDE3AQ14432 1141 aa15.14■□□□□ 0.01
MRPL55-209ENST00000366735 NECAB2Q7Z6G3 386 aa15.14■□□□□ 0.01
MRPL55-209ENST00000366735 FOXP4Q8IVH2 680 aaPredicted RBP15.14■□□□□ 0.01
MRPL55-209ENST00000366735 CCAR1Q8IX12 1150 aaKnown RBP15.14■□□□□ 0.01
MRPL55-209ENST00000366735 TGFBRAP1Q8WUH2 860 aa15.14■□□□□ 0.01
MRPL55-209ENST00000366735 SOCS4Q8WXH5 440 aa15.14■□□□□ 0.01
MRPL55-209ENST00000366735 ZNF512BQ96KM6 892 aaPredicted RBP15.14■□□□□ 0.01
MRPL55-209ENST00000366735 HMX1Q9NP08 348 aaPredicted RBP15.14■□□□□ 0.01
MRPL55-209ENST00000366735 RBM27Q9P2N5 1060 aaKnown RBP15.14■□□□□ 0.01
MRPL55-209ENST00000366735 MORF4L1Q9UBU8 362 aa15.14■□□□□ 0.01
MRPL55-209ENST00000366735 ZBTB47Q9UFB7 747 aaPredicted RBP15.14■□□□□ 0.01
MRPL55-209ENST00000366735 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.14■□□□□ 0.01
MRPL55-209ENST00000366735 RPTORQ8N122 1335 aa15.14■□□□□ 0.01
MRPL55-209ENST00000366735 BCAR3O75815 825 aa15.13■□□□□ 0.01
MRPL55-209ENST00000366735 ERICH6BQ5W0A0 696 aa15.13■□□□□ 0.01
MRPL55-209ENST00000366735 TMED8Q6PL24 325 aaPredicted RBP15.13■□□□□ 0.01
MRPL55-209ENST00000366735 MAPKAPK5Q8IW41 473 aa15.13■□□□□ 0.01
MRPL55-209ENST00000366735 TRMT44Q8IYL2 757 aaKnown RBP15.13■□□□□ 0.01
MRPL55-209ENST00000366735 TMEM57Q8N5G2 664 aa15.13■□□□□ 0.01
MRPL55-209ENST00000366735 CRISPLD2Q9H0B8 497 aa15.13■□□□□ 0.01
MRPL55-209ENST00000366735 SNRKQ9NRH2 765 aa15.13■□□□□ 0.01
MRPL55-209ENST00000366735 MYH7P12883 1935 aa15.13■□□□□ 0.01
MRPL55-209ENST00000366735 USP17L10C9JJH3 530 aa15.12■□□□□ 0.01
MRPL55-209ENST00000366735 SURF6O75683 361 aaKnown RBP15.12■□□□□ 0.01
MRPL55-209ENST00000366735 HOXA7P31268 230 aaPredicted RBP15.12■□□□□ 0.01
MRPL55-209ENST00000366735 SSH3Q8TE77 659 aa15.12■□□□□ 0.01
MRPL55-209ENST00000366735 NUDT12Q9BQG2 462 aa15.12■□□□□ 0.01
MRPL55-209ENST00000366735 DBNDD2Q9BQY9 259 aa15.12■□□□□ 0.01
MRPL55-209ENST00000366735 CWC22Q9HCG8 908 aaKnown RBP15.12■□□□□ 0.01
MRPL55-209ENST00000366735 MAPK4P31152 587 aa15.11■□□□□ 0.01
MRPL55-209ENST00000366735 HERVK_113P62684 666 aa15.11■□□□□ 0.01
MRPL55-209ENST00000366735 ATP8B2P98198 1209 aa15.11■□□□□ 0.01
MRPL55-209ENST00000366735 METTL16Q86W50 562 aaKnown RBP15.11■□□□□ 0.01
MRPL55-209ENST00000366735 ITPRIPQ8IWB1 547 aa15.11■□□□□ 0.01
MRPL55-209ENST00000366735 GPRC5AQ8NFJ5 357 aa15.11■□□□□ 0.01
MRPL55-209ENST00000366735 RNF25Q96BH1 459 aaPredicted RBP15.11■□□□□ 0.01
MRPL55-209ENST00000366735 PAWRQ96IZ0 340 aaKnown RBP15.11■□□□□ 0.01
MRPL55-209ENST00000366735 ZBTB21Q9ULJ3 1066 aa15.11■□□□□ 0.01
MRPL55-209ENST00000366735 GTPBP6O43824 516 aaPredicted RBP15.1■□□□□ 0.01
MRPL55-209ENST00000366735 CYP2E1P05181 493 aaPredicted RBP15.1■□□□□ 0.01
MRPL55-209ENST00000366735 ZAP70P43403 619 aa15.1■□□□□ 0.01
MRPL55-209ENST00000366735 USP5P45974 858 aa15.1■□□□□ 0.01
MRPL55-209ENST00000366735 ERC1Q8IUD2 1116 aa15.1■□□□□ 0.01
MRPL55-209ENST00000366735 TNNQ9UQP3 1299 aa15.1■□□□□ 0.01
MRPL55-209ENST00000366735 IDH1O75874 414 aaKnown RBP15.09■□□□□ 0.01
MRPL55-209ENST00000366735 GDF11O95390 407 aa15.09■□□□□ 0.01
MRPL55-209ENST00000366735 XRCC5P13010 732 aaKnown RBP15.09■□□□□ 0.01
MRPL55-209ENST00000366735 ZKSCAN1P17029 563 aaPredicted RBP15.09■□□□□ 0.01
MRPL55-209ENST00000366735 CYP7A1P22680 504 aa15.09■□□□□ 0.01
MRPL55-209ENST00000366735 USP14P54578 494 aa15.09■□□□□ 0.01
MRPL55-209ENST00000366735 RRP1BQ14684 758 aaKnown RBP15.09■□□□□ 0.01
MRPL55-209ENST00000366735 USP17L2Q6R6M4 530 aa15.09■□□□□ 0.01
MRPL55-209ENST00000366735 FEZ1Q99689 392 aa15.09■□□□□ 0.01
MRPL55-209ENST00000366735 NBPF3Q9H094 633 aa15.09■□□□□ 0.01
MRPL55-209ENST00000366735 DNAJC18Q9H819 358 aa15.09■□□□□ 0.01
MRPL55-209ENST00000366735 PALD1Q9ULE6 856 aa15.09■□□□□ 0.01
MRPL55-209ENST00000366735 GLRX3O76003 335 aaKnown RBP15.08■□□□□ 0
MRPL55-209ENST00000366735 CYP2B6P20813 491 aa15.08■□□□□ 0
MRPL55-209ENST00000366735 RGS2P41220 211 aa15.08■□□□□ 0
MRPL55-209ENST00000366735 ERVK-9P63128 1117 aa15.08■□□□□ 0
MRPL55-209ENST00000366735 ERVK-24P63145 666 aa15.08■□□□□ 0
MRPL55-209ENST00000366735 CCNA1P78396 465 aa15.08■□□□□ 0
MRPL55-209ENST00000366735 MAP3K12Q12852 859 aa15.08■□□□□ 0
MRPL55-209ENST00000366735 ADGRA1Q86SQ6 560 aa15.08■□□□□ 0
MRPL55-209ENST00000366735 TRIB2Q92519 343 aa15.08■□□□□ 0
MRPL55-209ENST00000366735 PRO3102Q9H379 93 aa15.08■□□□□ 0
MRPL55-209ENST00000366735 C11orf49Q9H6J7 331 aa15.08■□□□□ 0
MRPL55-209ENST00000366735 SAP30BPQ9UHR5 308 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms