RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 EVX2Q03828 476 aa12.51□□□□□ -0.41
YBX3-203ENST00000366286 MTMR2Q13614 643 aa12.51□□□□□ -0.41
YBX3-203ENST00000366286 KIF22Q14807 665 aa12.51□□□□□ -0.41
YBX3-203ENST00000366286 UBE3CQ15386 1083 aa12.51□□□□□ -0.41
YBX3-203ENST00000366286 ZSCAN25Q6NSZ9 544 aa12.51□□□□□ -0.41
YBX3-203ENST00000366286 TTC6Q86TZ1 520 aa12.51□□□□□ -0.41
YBX3-203ENST00000366286 DCP1AQ9NPI6 582 aaPredicted RBP12.51□□□□□ -0.41
YBX3-203ENST00000366286 MCM9Q9NXL9 1143 aa12.51□□□□□ -0.41
YBX3-203ENST00000366286 TTC41PQ6P2S7 1318 aa12.51□□□□□ -0.41
YBX3-203ENST00000366286 PARP14Q460N5 1801 aa12.51□□□□□ -0.41
YBX3-203ENST00000366286 GREB1LQ9C091 1923 aaPredicted RBP12.5□□□□□ -0.41
YBX3-203ENST00000366286 DOCK3Q8IZD9 2030 aa12.5□□□□□ -0.41
YBX3-203ENST00000366286 PRKAB2O43741 272 aa12.5□□□□□ -0.41
YBX3-203ENST00000366286 ECM2O94769 699 aaPredicted RBP12.5□□□□□ -0.41
YBX3-203ENST00000366286 GH2P01242 217 aa12.5□□□□□ -0.41
YBX3-203ENST00000366286 POLR3DP05423 398 aaPredicted RBP12.5□□□□□ -0.41
YBX3-203ENST00000366286 BCRP11274 1271 aa12.5□□□□□ -0.41
YBX3-203ENST00000366286 CTGFP29279 349 aa12.5□□□□□ -0.41
YBX3-203ENST00000366286 SHMT1P34896 483 aa12.5□□□□□ -0.41
YBX3-203ENST00000366286 HDAC1Q13547 482 aaPredicted RBP12.5□□□□□ -0.41
YBX3-203ENST00000366286 TATDN1Q6P1N9 297 aa12.5□□□□□ -0.41
YBX3-203ENST00000366286 KBTBD3Q8NAB2 608 aa12.5□□□□□ -0.41
YBX3-203ENST00000366286 PI4K2BQ8TCG2 481 aa12.5□□□□□ -0.41
YBX3-203ENST00000366286 WDR18Q9BV38 432 aa12.5□□□□□ -0.41
YBX3-203ENST00000366286 GINM1Q9NU53 330 aa12.5□□□□□ -0.41
YBX3-203ENST00000366286 PLXNB2O15031 1838 aa12.49□□□□□ -0.41
YBX3-203ENST00000366286 SALL3Q9BXA9 1300 aa12.49□□□□□ -0.41
YBX3-203ENST00000366286 CYP2D6P10635 497 aa12.49□□□□□ -0.41
YBX3-203ENST00000366286 MX1P20591 662 aa12.49□□□□□ -0.41
YBX3-203ENST00000366286 GABPAQ06546 454 aa12.49□□□□□ -0.41
YBX3-203ENST00000366286 ARHGEF6Q15052 776 aa12.49□□□□□ -0.41
YBX3-203ENST00000366286 SH3D19Q5HYK7 790 aa12.49□□□□□ -0.41
YBX3-203ENST00000366286 SMCR8Q8TEV9 937 aaPredicted RBP12.49□□□□□ -0.41
YBX3-203ENST00000366286 PUS7LQ9H0K6 701 aaKnown RBP12.49□□□□□ -0.41
YBX3-203ENST00000366286 PNMA3Q9UL41 463 aa12.49□□□□□ -0.41
YBX3-203ENST00000366286 PTCH2Q9Y6C5 1203 aa12.49□□□□□ -0.41
YBX3-203ENST00000366286 TNRC18O15417 2968 aaPredicted RBP12.49□□□□□ -0.41
YBX3-203ENST00000366286 MYH4Q9Y623 1939 aa12.49□□□□□ -0.41
YBX3-203ENST00000366286 A0A0G2JMZ2 1700 aa12.48□□□□□ -0.41
YBX3-203ENST00000366286 ERC2O15083 957 aa12.48□□□□□ -0.41
YBX3-203ENST00000366286 GLRX3O76003 335 aaKnown RBP12.48□□□□□ -0.41
YBX3-203ENST00000366286 PSMC4P43686 418 aa12.48□□□□□ -0.41
YBX3-203ENST00000366286 RGS19P49795 217 aa12.48□□□□□ -0.41
YBX3-203ENST00000366286 BACE1P56817 501 aa12.48□□□□□ -0.41
YBX3-203ENST00000366286 AAMPQ13685 434 aa12.48□□□□□ -0.41
YBX3-203ENST00000366286 ABCB5Q2M3G0 1257 aa12.48□□□□□ -0.41
YBX3-203ENST00000366286 CERKLQ49MI3 558 aaPredicted RBP12.48□□□□□ -0.41
YBX3-203ENST00000366286 ANKRD45Q5TZF3 282 aa12.48□□□□□ -0.41
YBX3-203ENST00000366286 EXOC6Q8TAG9 804 aa12.48□□□□□ -0.41
YBX3-203ENST00000366286 GCC1Q96CN9 775 aa12.48□□□□□ -0.41
YBX3-203ENST00000366286 TRIM47Q96LD4 638 aa12.48□□□□□ -0.41
YBX3-203ENST00000366286 ATP8A2Q9NTI2 1148 aa12.48□□□□□ -0.41
YBX3-203ENST00000366286 SLC4A4Q9Y6R1 1079 aa12.48□□□□□ -0.41
YBX3-203ENST00000366286 RLFQ13129 1914 aa12.47□□□□□ -0.41
YBX3-203ENST00000366286 USP17L10C9JJH3 530 aa12.47□□□□□ -0.41
YBX3-203ENST00000366286 GNRH1P01148 92 aa12.47□□□□□ -0.41
YBX3-203ENST00000366286 OSBPP22059 807 aa12.47□□□□□ -0.41
YBX3-203ENST00000366286 PABPC4Q13310 644 aaKnown RBP eCLIP12.47□□□□□ -0.41
YBX3-203ENST00000366286 RAB3GAP1Q15042 981 aa12.47□□□□□ -0.41
YBX3-203ENST00000366286 SLC44A5Q8NCS7 719 aa12.47□□□□□ -0.41
YBX3-203ENST00000366286 APPBP2Q92624 585 aa12.47□□□□□ -0.41
YBX3-203ENST00000366286 ARMC5Q96C12 935 aa12.47□□□□□ -0.41
YBX3-203ENST00000366286 TMOD4Q9NZQ9 345 aa12.47□□□□□ -0.41
YBX3-203ENST00000366286 ZBTB47Q9UFB7 747 aaPredicted RBP12.47□□□□□ -0.41
YBX3-203ENST00000366286 CYP2D7A0A087X1C5 515 aa12.46□□□□□ -0.41
YBX3-203ENST00000366286 C19orf81C9J6K1 198 aa12.46□□□□□ -0.41
YBX3-203ENST00000366286 SMIM22K7EJ46 135 aa12.46□□□□□ -0.41
YBX3-203ENST00000366286 M0R2C6 588 aa12.46□□□□□ -0.41
YBX3-203ENST00000366286 RNF113AO15541 343 aaKnown RBP12.46□□□□□ -0.41
YBX3-203ENST00000366286 FMNL1O95466 1100 aaPredicted RBP12.46□□□□□ -0.41
YBX3-203ENST00000366286 GUCY1A2P33402 732 aa12.46□□□□□ -0.41
YBX3-203ENST00000366286 FCGRTP55899 365 aa12.46□□□□□ -0.41
YBX3-203ENST00000366286 MLLT1Q03111 559 aaPredicted RBP12.46□□□□□ -0.41
YBX3-203ENST00000366286 ZYXQ15942 572 aaKnown RBP12.46□□□□□ -0.41
YBX3-203ENST00000366286 SLC9C1Q4G0N8 1177 aa12.46□□□□□ -0.41
YBX3-203ENST00000366286 ANKRD13CQ8N6S4 541 aa12.46□□□□□ -0.41
YBX3-203ENST00000366286 OSBP2Q969R2 916 aa12.46□□□□□ -0.41
YBX3-203ENST00000366286 DYNLL2Q96FJ2 89 aa12.46□□□□□ -0.41
YBX3-203ENST00000366286 DDRGK1Q96HY6 314 aa12.46□□□□□ -0.41
YBX3-203ENST00000366286 FEZ1Q99689 392 aa12.46□□□□□ -0.41
YBX3-203ENST00000366286 ASCC2Q9H1I8 757 aaPredicted RBP12.46□□□□□ -0.41
YBX3-203ENST00000366286 CABP5Q9NP86 173 aa12.46□□□□□ -0.41
YBX3-203ENST00000366286 SUPT16HQ9Y5B9 1047 aaKnown RBP12.46□□□□□ -0.41
YBX3-203ENST00000366286 COL11A1P12107 1806 aaPredicted RBP12.46□□□□□ -0.42
YBX3-203ENST00000366286 MYPNQ86TC9 1320 aa12.45□□□□□ -0.42
YBX3-203ENST00000366286 ZFYP08048 801 aaPredicted RBP12.45□□□□□ -0.42
YBX3-203ENST00000366286 PRMT2P55345 433 aa12.45□□□□□ -0.42
YBX3-203ENST00000366286 IRX3P78415 501 aaPredicted RBP12.45□□□□□ -0.42
YBX3-203ENST00000366286 SEPT2Q15019 361 aa12.45□□□□□ -0.42
YBX3-203ENST00000366286 FAM110CQ1W6H9 321 aa12.45□□□□□ -0.42
YBX3-203ENST00000366286 C12orf60Q5U649 245 aa12.45□□□□□ -0.42
YBX3-203ENST00000366286 USP17L2Q6R6M4 530 aa12.45□□□□□ -0.42
YBX3-203ENST00000366286 AMOTL1Q8IY63 956 aa12.45□□□□□ -0.42
YBX3-203ENST00000366286 STRBPQ96SI9 672 aaKnown RBP12.45□□□□□ -0.42
YBX3-203ENST00000366286 FSD1Q9BTV5 496 aa12.45□□□□□ -0.42
YBX3-203ENST00000366286 EMILIN3Q9NT22 766 aa12.45□□□□□ -0.42
YBX3-203ENST00000366286 SRRDQ9UH36 339 aa12.45□□□□□ -0.42
YBX3-203ENST00000366286 SWAP70Q9UH65 585 aa12.45□□□□□ -0.42
YBX3-203ENST00000366286 USP17L12C9JPN9 530 aa12.44□□□□□ -0.42
YBX3-203ENST00000366286 USP17L21D6R901 530 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms