RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 ROBO2Q9HCK4 1378 aa5.42□□□□□ -1.54
RNU4-48P-201ENST00000365559 UPK3BL1B0FP48 263 aa5.41□□□□□ -1.54
RNU4-48P-201ENST00000365559 UPK3BL2E5RIL1 263 aa5.41□□□□□ -1.54
RNU4-48P-201ENST00000365559 CYP26A1O43174 497 aa5.41□□□□□ -1.54
RNU4-48P-201ENST00000365559 HYAL3O43820 417 aaPredicted RBP5.41□□□□□ -1.54
RNU4-48P-201ENST00000365559 HTR3BO95264 441 aa5.41□□□□□ -1.54
RNU4-48P-201ENST00000365559 CST3P01034 146 aaPredicted RBP5.41□□□□□ -1.54
RNU4-48P-201ENST00000365559 GRIK1P39086 918 aa5.41□□□□□ -1.54
RNU4-48P-201ENST00000365559 APOBRQ0VD83 1088 aa5.41□□□□□ -1.54
RNU4-48P-201ENST00000365559 LRP8Q14114 963 aa5.41□□□□□ -1.54
RNU4-48P-201ENST00000365559 SEZ6Q53EL9 994 aa5.41□□□□□ -1.54
RNU4-48P-201ENST00000365559 ARTNQ5T4W7 220 aa5.41□□□□□ -1.54
RNU4-48P-201ENST00000365559 FAM214BQ7L5A3 538 aa5.41□□□□□ -1.54
RNU4-48P-201ENST00000365559 MCATQ8IVS2 390 aaKnown RBP5.41□□□□□ -1.54
RNU4-48P-201ENST00000365559 MRPL41Q8IXM3 137 aaKnown RBP5.41□□□□□ -1.54
RNU4-48P-201ENST00000365559 Q8N3U1 123 aa5.41□□□□□ -1.54
RNU4-48P-201ENST00000365559 FAM181AQ8N9Y4 354 aa5.41□□□□□ -1.54
RNU4-48P-201ENST00000365559 RIN3Q8TB24 985 aa5.41□□□□□ -1.54
RNU4-48P-201ENST00000365559 XAGE3Q8WTP9 111 aa5.41□□□□□ -1.54
RNU4-48P-201ENST00000365559 HEXIM2Q96MH2 286 aaKnown RBP5.41□□□□□ -1.54
RNU4-48P-201ENST00000365559 NT5C1AQ9BXI3 368 aa5.41□□□□□ -1.54
RNU4-48P-201ENST00000365559 REV1Q9UBZ9 1251 aa5.41□□□□□ -1.54
RNU4-48P-201ENST00000365559 ADAM30Q9UKF2 790 aa5.41□□□□□ -1.54
RNU4-48P-201ENST00000365559 KIAA1324LA8MWY0 1029 aaPredicted RBP5.4□□□□□ -1.54
RNU4-48P-201ENST00000365559 DNAJA2O60884 412 aa5.4□□□□□ -1.54
RNU4-48P-201ENST00000365559 EOMESO95936 686 aa5.4□□□□□ -1.54
RNU4-48P-201ENST00000365559 MSMPQ1L6U9 139 aa5.4□□□□□ -1.54
RNU4-48P-201ENST00000365559 TMEM201Q5SNT2 666 aa5.4□□□□□ -1.54
RNU4-48P-201ENST00000365559 INTS5Q6P9B9 1019 aaKnown RBP5.4□□□□□ -1.54
RNU4-48P-201ENST00000365559 ZNF654Q8IZM8 581 aa5.4□□□□□ -1.54
RNU4-48P-201ENST00000365559 MFSD2AQ8NA29 543 aa5.4□□□□□ -1.54
RNU4-48P-201ENST00000365559 MIPEPQ99797 713 aa5.4□□□□□ -1.54
RNU4-48P-201ENST00000365559 ZC3H7BQ9UGR2 993 aaKnown RBP5.4□□□□□ -1.54
RNU4-48P-201ENST00000365559 PCDHB14Q9Y5E9 798 aa5.4□□□□□ -1.54
RNU4-48P-201ENST00000365559 CNTNAP4Q9C0A0 1308 aa5.4□□□□□ -1.55
RNU4-48P-201ENST00000365559 ADAMTS4O75173 837 aa5.39□□□□□ -1.55
RNU4-48P-201ENST00000365559 SPINK2P20155 84 aa5.39□□□□□ -1.55
RNU4-48P-201ENST00000365559 OXCT1P55809 520 aa5.39□□□□□ -1.55
RNU4-48P-201ENST00000365559 CLCQ05315 142 aa5.39□□□□□ -1.55
RNU4-48P-201ENST00000365559 RAD51AP2Q09MP3 1159 aa5.39□□□□□ -1.55
RNU4-48P-201ENST00000365559 SLC6A19Q695T7 634 aa5.39□□□□□ -1.55
RNU4-48P-201ENST00000365559 LETMD1Q6P1Q0 360 aa5.39□□□□□ -1.55
RNU4-48P-201ENST00000365559 DTX1Q86Y01 620 aa5.39□□□□□ -1.55
RNU4-48P-201ENST00000365559 SLITRK4Q8IW52 837 aa5.39□□□□□ -1.55
RNU4-48P-201ENST00000365559 NKD1Q969G9 470 aa5.39□□□□□ -1.55
RNU4-48P-201ENST00000365559 PCMTD2Q9NV79 361 aa5.39□□□□□ -1.55
RNU4-48P-201ENST00000365559 KLHL3Q9UH77 587 aa5.39□□□□□ -1.55
RNU4-48P-201ENST00000365559 CHURC1-FNTBB4DL54 471 aa5.38□□□□□ -1.55
RNU4-48P-201ENST00000365559 ATE1O95260 518 aa5.38□□□□□ -1.55
RNU4-48P-201ENST00000365559 MCM4P33991 863 aa5.38□□□□□ -1.55
RNU4-48P-201ENST00000365559 GK5Q6ZS86 529 aa5.38□□□□□ -1.55
RNU4-48P-201ENST00000365559 PLD6Q8N2A8 252 aaKnown RBP5.38□□□□□ -1.55
RNU4-48P-201ENST00000365559 FAM13CQ8NE31 585 aa5.38□□□□□ -1.55
RNU4-48P-201ENST00000365559 EHMT1Q9H9B1 1298 aa5.38□□□□□ -1.55
RNU4-48P-201ENST00000365559 ZFP64Q9NPA5 681 aa5.38□□□□□ -1.55
RNU4-48P-201ENST00000365559 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.38□□□□□ -1.55
RNU4-48P-201ENST00000365559 TCF3P15923 654 aa5.37□□□□□ -1.55
RNU4-48P-201ENST00000365559 ITIH2P19823 946 aa5.37□□□□□ -1.55
RNU4-48P-201ENST00000365559 PAK2Q13177 524 aa5.37□□□□□ -1.55
RNU4-48P-201ENST00000365559 CDH24Q86UP0 819 aa5.37□□□□□ -1.55
RNU4-48P-201ENST00000365559 REXO1Q8N1G1 1221 aaKnown RBP5.37□□□□□ -1.55
RNU4-48P-201ENST00000365559 DNAJB8Q8NHS0 232 aa5.37□□□□□ -1.55
RNU4-48P-201ENST00000365559 PPP1R13LQ8WUF5 828 aa5.37□□□□□ -1.55
RNU4-48P-201ENST00000365559 ACBD3Q9H3P7 528 aa5.37□□□□□ -1.55
RNU4-48P-201ENST00000365559 PRDM5Q9NQX1 630 aaPredicted RBP5.37□□□□□ -1.55
RNU4-48P-201ENST00000365559 GTF2IRD1Q9UHL9 959 aa5.37□□□□□ -1.55
RNU4-48P-201ENST00000365559 TPX2Q9ULW0 747 aaKnown RBP5.37□□□□□ -1.55
RNU4-48P-201ENST00000365559 PLAGL2Q9UPG8 496 aa5.37□□□□□ -1.55
RNU4-48P-201ENST00000365559 SLC22A31A6NKX4 558 aa5.36□□□□□ -1.55
RNU4-48P-201ENST00000365559 PRR33A8MZF0 331 aa5.36□□□□□ -1.55
RNU4-48P-201ENST00000365559 IGF2BP3O00425 579 aaKnown RBP eCLIP5.36□□□□□ -1.55
RNU4-48P-201ENST00000365559 ZNF165P49910 485 aa5.36□□□□□ -1.55
RNU4-48P-201ENST00000365559 YARSP54577 528 aaKnown RBP5.36□□□□□ -1.55
RNU4-48P-201ENST00000365559 SLFN12Q8IYM2 578 aa5.36□□□□□ -1.55
RNU4-48P-201ENST00000365559 CYB5D2Q8WUJ1 264 aa5.36□□□□□ -1.55
RNU4-48P-201ENST00000365559 TGIF2Q9GZN2 237 aa5.36□□□□□ -1.55
RNU4-48P-201ENST00000365559 ANTXR1Q9H6X2 564 aa5.36□□□□□ -1.55
RNU4-48P-201ENST00000365559 LOC100996750A0A140TA64 210 aa5.35□□□□□ -1.55
RNU4-48P-201ENST00000365559 PRNPP04156 253 aa5.35□□□□□ -1.55
RNU4-48P-201ENST00000365559 CEACAM5P06731 702 aa5.35□□□□□ -1.55
RNU4-48P-201ENST00000365559 ARSHQ5FYA8 562 aa5.35□□□□□ -1.55
RNU4-48P-201ENST00000365559 OVOS1Q6IE37 1185 aa5.35□□□□□ -1.55
RNU4-48P-201ENST00000365559 NFXL1Q6ZNB6 911 aa5.35□□□□□ -1.55
RNU4-48P-201ENST00000365559 ARHGAP27Q6ZUM4 889 aa5.35□□□□□ -1.55
RNU4-48P-201ENST00000365559 NETO1Q8TDF5 533 aa5.35□□□□□ -1.55
RNU4-48P-201ENST00000365559 KRTAP4-6Q9BYQ5 205 aa5.35□□□□□ -1.55
RNU4-48P-201ENST00000365559 MKNK2Q9HBH9 465 aa5.35□□□□□ -1.55
RNU4-48P-201ENST00000365559 BSDC1Q9NW68 430 aaPredicted RBP5.35□□□□□ -1.55
RNU4-48P-201ENST00000365559 GMIPQ9P107 970 aa5.35□□□□□ -1.55
RNU4-48P-201ENST00000365559 CCDC39Q9UFE4 941 aa5.35□□□□□ -1.55
RNU4-48P-201ENST00000365559 CEP131Q9UPN4 1083 aa5.35□□□□□ -1.55
RNU4-48P-201ENST00000365559 MAPK8IP1Q9UQF2 711 aa5.35□□□□□ -1.55
RNU4-48P-201ENST00000365559 E9PSI1 815 aa5.34□□□□□ -1.55
RNU4-48P-201ENST00000365559 ERCC5P28715 1186 aaPredicted RBP5.34□□□□□ -1.55
RNU4-48P-201ENST00000365559 TNNI2P48788 182 aa5.34□□□□□ -1.55
RNU4-48P-201ENST00000365559 MLECQ14165 292 aa5.34□□□□□ -1.55
RNU4-48P-201ENST00000365559 NKPD1Q17RQ9 610 aa5.34□□□□□ -1.55
RNU4-48P-201ENST00000365559 SFRP5Q5T4F7 317 aa5.34□□□□□ -1.55
RNU4-48P-201ENST00000365559 SPACA3Q8IXA5 215 aa5.34□□□□□ -1.55
RNU4-48P-201ENST00000365559 BAHD1Q8TBE0 780 aaPredicted RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms