RNA–Protein interactions for RNA: ENST00000364426.1

RNU4-41P-201, Transcript of RNA, U4 small nuclear 41, pseudogene, humanhuman

BASIC

Gene RNU4-41P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-41P-201ENST00000364426 TTF2Q9UNY4 1162 aaKnown RBP3.22□□□□□ -1.89
RNU4-41P-201ENST00000364426 ST14Q9Y5Y6 855 aa3.22□□□□□ -1.89
RNU4-41P-201ENST00000364426 AK5Q9Y6K8 562 aa3.22□□□□□ -1.89
RNU4-41P-201ENST00000364426 CAPN6Q9Y6Q1 641 aa3.22□□□□□ -1.89
RNU4-41P-201ENST00000364426 PRAMEF27A3QJZ7 478 aa3.21□□□□□ -1.9
RNU4-41P-201ENST00000364426 ZNF503-AS2A6NEH8 195 aa3.21□□□□□ -1.9
RNU4-41P-201ENST00000364426 PRR33A8MZF0 331 aa3.21□□□□□ -1.9
RNU4-41P-201ENST00000364426 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.21□□□□□ -1.9
RNU4-41P-201ENST00000364426 KRTAP19-4Q3LI73 84 aa3.21□□□□□ -1.9
RNU4-41P-201ENST00000364426 LETMD1Q6P1Q0 360 aa3.21□□□□□ -1.9
RNU4-41P-201ENST00000364426 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.21□□□□□ -1.9
RNU4-41P-201ENST00000364426 MRPL41Q8IXM3 137 aaKnown RBP3.21□□□□□ -1.9
RNU4-41P-201ENST00000364426 CCDC120Q96HB5 630 aa3.21□□□□□ -1.9
RNU4-41P-201ENST00000364426 HSPA12BQ96MM6 686 aa3.21□□□□□ -1.9
RNU4-41P-201ENST00000364426 MIPEPQ99797 713 aa3.21□□□□□ -1.9
RNU4-41P-201ENST00000364426 KRTAP4-7Q9BYR0 210 aa3.21□□□□□ -1.9
RNU4-41P-201ENST00000364426 PRDM7Q9NQW5 492 aa3.21□□□□□ -1.9
RNU4-41P-201ENST00000364426 C19orf73Q9NVV2 129 aa3.21□□□□□ -1.9
RNU4-41P-201ENST00000364426 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.21□□□□□ -1.9
RNU4-41P-201ENST00000364426 TIMELESSQ9UNS1 1208 aa3.21□□□□□ -1.9
RNU4-41P-201ENST00000364426 CNTNAP4Q9C0A0 1308 aa3.2□□□□□ -1.9
RNU4-41P-201ENST00000364426 FAM155AB1AL88 458 aaPredicted RBP3.2□□□□□ -1.9
RNU4-41P-201ENST00000364426 GLI1P08151 1106 aa3.2□□□□□ -1.9
RNU4-41P-201ENST00000364426 RLBP1P12271 317 aa3.2□□□□□ -1.9
RNU4-41P-201ENST00000364426 CYP7A1P22680 504 aa3.2□□□□□ -1.9
RNU4-41P-201ENST00000364426 GDNFP39905 211 aa3.2□□□□□ -1.9
RNU4-41P-201ENST00000364426 CDK8P49336 464 aa3.2□□□□□ -1.9
RNU4-41P-201ENST00000364426 ETF1P62495 437 aaKnown RBP3.2□□□□□ -1.9
RNU4-41P-201ENST00000364426 CCDC85BQ15834 202 aaPredicted RBP3.2□□□□□ -1.9
RNU4-41P-201ENST00000364426 KCNMB1Q16558 191 aa3.2□□□□□ -1.9
RNU4-41P-201ENST00000364426 PRAMEF13Q5VWM6 474 aa3.2□□□□□ -1.9
RNU4-41P-201ENST00000364426 CILP2Q8IUL8 1156 aa3.2□□□□□ -1.9
RNU4-41P-201ENST00000364426 KSR1Q8IVT5 923 aa3.2□□□□□ -1.9
RNU4-41P-201ENST00000364426 PIWIL2Q8TC59 973 aaKnown RBP3.2□□□□□ -1.9
RNU4-41P-201ENST00000364426 SLC38A3Q99624 504 aa3.2□□□□□ -1.9
RNU4-41P-201ENST00000364426 CARS2Q9HA77 564 aaKnown RBP3.2□□□□□ -1.9
RNU4-41P-201ENST00000364426 ATP13A1Q9HD20 1204 aa3.2□□□□□ -1.9
RNU4-41P-201ENST00000364426 ADAM30Q9UKF2 790 aa3.2□□□□□ -1.9
RNU4-41P-201ENST00000364426 TPX2Q9ULW0 747 aaKnown RBP3.2□□□□□ -1.9
RNU4-41P-201ENST00000364426 LRRC10BA6NIK2 292 aa3.19□□□□□ -1.9
RNU4-41P-201ENST00000364426 TSPAN15O95858 294 aa3.19□□□□□ -1.9
RNU4-41P-201ENST00000364426 GRK4P32298 578 aa3.19□□□□□ -1.9
RNU4-41P-201ENST00000364426 ETV3P41162 512 aa3.19□□□□□ -1.9
RNU4-41P-201ENST00000364426 LIG3P49916 1009 aa3.19□□□□□ -1.9
RNU4-41P-201ENST00000364426 ST13P50502 369 aaKnown RBP3.19□□□□□ -1.9
RNU4-41P-201ENST00000364426 ZNF124Q15973 351 aa3.19□□□□□ -1.9
RNU4-41P-201ENST00000364426 PKN1Q16512 942 aa3.19□□□□□ -1.9
RNU4-41P-201ENST00000364426 TSNAXIP1Q2TAA8 658 aa3.19□□□□□ -1.9
RNU4-41P-201ENST00000364426 FYB2Q5VWT5 728 aa3.19□□□□□ -1.9
RNU4-41P-201ENST00000364426 SLC6A19Q695T7 634 aa3.19□□□□□ -1.9
RNU4-41P-201ENST00000364426 SPOCD1Q6ZMY3 1216 aa3.19□□□□□ -1.9
RNU4-41P-201ENST00000364426 TMPRSS7Q7RTY8 843 aa3.19□□□□□ -1.9
RNU4-41P-201ENST00000364426 CCDC84Q86UT8 332 aaPredicted RBP3.19□□□□□ -1.9
RNU4-41P-201ENST00000364426 RIN3Q8TB24 985 aa3.19□□□□□ -1.9
RNU4-41P-201ENST00000364426 NOC4LQ9BVI4 516 aaKnown RBP3.19□□□□□ -1.9
RNU4-41P-201ENST00000364426 TJP2Q9UDY2 1190 aa3.19□□□□□ -1.9
RNU4-41P-201ENST00000364426 PCDHB5Q9Y5E4 795 aa3.19□□□□□ -1.9
RNU4-41P-201ENST00000364426 H3BS24 57 aa3.18□□□□□ -1.9
RNU4-41P-201ENST00000364426 TFE3P19532 575 aaPredicted RBP3.18□□□□□ -1.9
RNU4-41P-201ENST00000364426 PDE4BQ07343 736 aa3.18□□□□□ -1.9
RNU4-41P-201ENST00000364426 TNK2Q07912 1038 aa3.18□□□□□ -1.9
RNU4-41P-201ENST00000364426 SEPT6Q14141 434 aa3.18□□□□□ -1.9
RNU4-41P-201ENST00000364426 FBLN7Q53RD9 439 aa3.18□□□□□ -1.9
RNU4-41P-201ENST00000364426 EAPPQ56P03 285 aaPredicted RBP3.18□□□□□ -1.9
RNU4-41P-201ENST00000364426 CDKAL1Q5VV42 579 aa3.18□□□□□ -1.9
RNU4-41P-201ENST00000364426 MCATQ8IVS2 390 aaKnown RBP3.18□□□□□ -1.9
RNU4-41P-201ENST00000364426 DNAJB8Q8NHS0 232 aa3.18□□□□□ -1.9
RNU4-41P-201ENST00000364426 KIRREL1Q96J84 757 aa3.18□□□□□ -1.9
RNU4-41P-201ENST00000364426 TMEM87BQ96K49 555 aa3.18□□□□□ -1.9
RNU4-41P-201ENST00000364426 ALPK1Q96QP1 1244 aa3.18□□□□□ -1.9
RNU4-41P-201ENST00000364426 PPP1R16BQ96T49 567 aa3.18□□□□□ -1.9
RNU4-41P-201ENST00000364426 DUSP9Q99956 384 aaKnown RBP3.18□□□□□ -1.9
RNU4-41P-201ENST00000364426 MIR1-1HGQ9H1L0 117 aa3.18□□□□□ -1.9
RNU4-41P-201ENST00000364426 ESR1P03372 595 aa3.17□□□□□ -1.9
RNU4-41P-201ENST00000364426 PGRP06401 933 aa3.17□□□□□ -1.9
RNU4-41P-201ENST00000364426 SRFP11831 508 aa3.17□□□□□ -1.9
RNU4-41P-201ENST00000364426 LMNB1P20700 586 aa3.17□□□□□ -1.9
RNU4-41P-201ENST00000364426 DAB2P98082 770 aa3.17□□□□□ -1.9
RNU4-41P-201ENST00000364426 RPL6Q02878 288 aaKnown RBP3.17□□□□□ -1.9
RNU4-41P-201ENST00000364426 MLANAQ16655 118 aa3.17□□□□□ -1.9
RNU4-41P-201ENST00000364426 GAB4Q2WGN9 574 aa3.17□□□□□ -1.9
RNU4-41P-201ENST00000364426 TMEM67Q5HYA8 995 aa3.17□□□□□ -1.9
RNU4-41P-201ENST00000364426 TMEM201Q5SNT2 666 aa3.17□□□□□ -1.9
RNU4-41P-201ENST00000364426 SND1Q7KZF4 910 aaKnown RBP eCLIP3.17□□□□□ -1.9
RNU4-41P-201ENST00000364426 UBE2FQ969M7 185 aa3.17□□□□□ -1.9
RNU4-41P-201ENST00000364426 ACSF2Q96CM8 615 aaPredicted RBP3.17□□□□□ -1.9
RNU4-41P-201ENST00000364426 LIN37Q96GY3 246 aaPredicted RBP3.17□□□□□ -1.9
RNU4-41P-201ENST00000364426 Q96M66 194 aa3.17□□□□□ -1.9
RNU4-41P-201ENST00000364426 PRR36Q9H6K5 1346 aa3.17□□□□□ -1.9
RNU4-41P-201ENST00000364426 USP31Q70CQ4 1352 aa3.16□□□□□ -1.9
RNU4-41P-201ENST00000364426 FAM221AA4D161 298 aa3.16□□□□□ -1.9
RNU4-41P-201ENST00000364426 ANKRD33BA6NCL7 494 aa3.16□□□□□ -1.9
RNU4-41P-201ENST00000364426 CILPO75339 1184 aa3.16□□□□□ -1.9
RNU4-41P-201ENST00000364426 HPXP02790 462 aa3.16□□□□□ -1.9
RNU4-41P-201ENST00000364426 KRT1P04264 644 aa3.16□□□□□ -1.9
RNU4-41P-201ENST00000364426 TAF1CQ15572 869 aaPredicted RBP3.16□□□□□ -1.9
RNU4-41P-201ENST00000364426 LCE4AQ5TA78 99 aa3.16□□□□□ -1.9
RNU4-41P-201ENST00000364426 MEI1Q5TIA1 1274 aa3.16□□□□□ -1.9
RNU4-41P-201ENST00000364426 PRR23BQ6ZRT6 265 aa3.16□□□□□ -1.9
RNU4-41P-201ENST00000364426 TMC4Q7Z404 712 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms