RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 BCO2Q9BYV7 579 aa4.88□□□□□ -1.63
RNU6-238P-201ENST00000363313 SRCIN1Q9C0H9 1055 aa4.88□□□□□ -1.63
RNU6-238P-201ENST00000363313 CYP8B1Q9UNU6 501 aa4.88□□□□□ -1.63
RNU6-238P-201ENST00000363313 JAG2Q9Y219 1238 aa4.88□□□□□ -1.63
RNU6-238P-201ENST00000363313 H3BRB1 525 aa4.87□□□□□ -1.63
RNU6-238P-201ENST00000363313 SEMA7AO75326 666 aa4.87□□□□□ -1.63
RNU6-238P-201ENST00000363313 BMP6P22004 513 aa4.87□□□□□ -1.63
RNU6-238P-201ENST00000363313 LILRA2Q8N149 483 aa4.87□□□□□ -1.63
RNU6-238P-201ENST00000363313 TUT1Q9H6E5 874 aaKnown RBP4.87□□□□□ -1.63
RNU6-238P-201ENST00000363313 CBX8Q9HC52 389 aa4.87□□□□□ -1.63
RNU6-238P-201ENST00000363313 TMEM59LQ9UK28 342 aa4.87□□□□□ -1.63
RNU6-238P-201ENST00000363313 TPX2Q9ULW0 747 aaKnown RBP4.87□□□□□ -1.63
RNU6-238P-201ENST00000363313 GPR182O15218 404 aa4.86□□□□□ -1.63
RNU6-238P-201ENST00000363313 CDKAL1Q5VV42 579 aa4.86□□□□□ -1.63
RNU6-238P-201ENST00000363313 C12orf40Q86WS4 652 aa4.86□□□□□ -1.63
RNU6-238P-201ENST00000363313 TMEM151BQ8IW70 566 aa4.86□□□□□ -1.63
RNU6-238P-201ENST00000363313 BAHD1Q8TBE0 780 aaPredicted RBP4.86□□□□□ -1.63
RNU6-238P-201ENST00000363313 UBE2FQ969M7 185 aa4.86□□□□□ -1.63
RNU6-238P-201ENST00000363313 USTQ9Y2C2 406 aa4.86□□□□□ -1.63
RNU6-238P-201ENST00000363313 AKAP2Q9Y2D5 859 aa4.86□□□□□ -1.63
RNU6-238P-201ENST00000363313 DCDC2CA8MYV0 355 aa4.85□□□□□ -1.63
RNU6-238P-201ENST00000363313 H3BS24 57 aa4.85□□□□□ -1.63
RNU6-238P-201ENST00000363313 FOXD2O60548 495 aaPredicted RBP4.85□□□□□ -1.63
RNU6-238P-201ENST00000363313 SYN1P17600 705 aa4.85□□□□□ -1.63
RNU6-238P-201ENST00000363313 SLBPQ14493 270 aaKnown RBP eCLIP4.85□□□□□ -1.63
RNU6-238P-201ENST00000363313 NR0B2Q15466 257 aa4.85□□□□□ -1.63
RNU6-238P-201ENST00000363313 LLGL2Q6P1M3 1020 aa4.85□□□□□ -1.63
RNU6-238P-201ENST00000363313 BORCS6Q96GS4 357 aa4.85□□□□□ -1.63
RNU6-238P-201ENST00000363313 WNT10AQ9GZT5 417 aa4.85□□□□□ -1.63
RNU6-238P-201ENST00000363313 SLC6A17Q9H1V8 727 aa4.85□□□□□ -1.63
RNU6-238P-201ENST00000363313 SLAMF8Q9P0V8 285 aa4.85□□□□□ -1.63
RNU6-238P-201ENST00000363313 CSADQ9Y600 493 aa4.85□□□□□ -1.63
RNU6-238P-201ENST00000363313 TACC3Q9Y6A5 838 aa4.85□□□□□ -1.63
RNU6-238P-201ENST00000363313 SNCAIPQ9Y6H5 919 aa4.85□□□□□ -1.63
RNU6-238P-201ENST00000363313 PRR33A8MZF0 331 aa4.84□□□□□ -1.63
RNU6-238P-201ENST00000363313 GIPC1O14908 333 aa4.84□□□□□ -1.63
RNU6-238P-201ENST00000363313 GSTT1P30711 240 aa4.84□□□□□ -1.63
RNU6-238P-201ENST00000363313 FGD1P98174 961 aa4.84□□□□□ -1.63
RNU6-238P-201ENST00000363313 LETMD1Q6P1Q0 360 aa4.84□□□□□ -1.63
RNU6-238P-201ENST00000363313 HDXQ7Z353 690 aa4.84□□□□□ -1.63
RNU6-238P-201ENST00000363313 UBE3DQ7Z6J8 389 aa4.84□□□□□ -1.63
RNU6-238P-201ENST00000363313 HID1Q8IV36 788 aa4.84□□□□□ -1.63
RNU6-238P-201ENST00000363313 C3orf58Q8NDZ4 430 aa4.84□□□□□ -1.63
RNU6-238P-201ENST00000363313 PDZD8Q8NEN9 1154 aa4.84□□□□□ -1.63
RNU6-238P-201ENST00000363313 CXorf38Q8TB03 319 aa4.84□□□□□ -1.63
RNU6-238P-201ENST00000363313 TMC1Q8TDI8 760 aa4.84□□□□□ -1.63
RNU6-238P-201ENST00000363313 ELMO3Q96BJ8 720 aa4.84□□□□□ -1.63
RNU6-238P-201ENST00000363313 ZCCHC4Q9H5U6 513 aa4.84□□□□□ -1.63
RNU6-238P-201ENST00000363313 CWC22Q9HCG8 908 aaKnown RBP4.84□□□□□ -1.63
RNU6-238P-201ENST00000363313 PCDHA4Q9UN74 947 aa4.84□□□□□ -1.63
RNU6-238P-201ENST00000363313 ENC1O14682 589 aa4.83□□□□□ -1.64
RNU6-238P-201ENST00000363313 CST3P01034 146 aaPredicted RBP4.83□□□□□ -1.64
RNU6-238P-201ENST00000363313 ESR1P03372 595 aa4.83□□□□□ -1.64
RNU6-238P-201ENST00000363313 DLG4P78352 724 aa4.83□□□□□ -1.64
RNU6-238P-201ENST00000363313 SNX17Q15036 470 aa4.83□□□□□ -1.64
RNU6-238P-201ENST00000363313 ZNF385BQ569K4 471 aa4.83□□□□□ -1.64
RNU6-238P-201ENST00000363313 TCERG1LQ5VWI1 586 aa4.83□□□□□ -1.64
RNU6-238P-201ENST00000363313 OXR1Q8N573 874 aa4.83□□□□□ -1.64
RNU6-238P-201ENST00000363313 GRIN3AQ8TCU5 1115 aa4.83□□□□□ -1.64
RNU6-238P-201ENST00000363313 KCNC2Q96PR1 638 aa4.83□□□□□ -1.64
RNU6-238P-201ENST00000363313 IRF2BPLQ9H1B7 796 aa4.83□□□□□ -1.64
RNU6-238P-201ENST00000363313 ZSWIM5Q9P217 1185 aa4.83□□□□□ -1.64
RNU6-238P-201ENST00000363313 DNAJC25-GNG10A0A024R161 153 aa4.82□□□□□ -1.64
RNU6-238P-201ENST00000363313 TEX51A0A1B0GUA7 166 aa4.82□□□□□ -1.64
RNU6-238P-201ENST00000363313 ERICH6BQ5W0A0 696 aa4.82□□□□□ -1.64
RNU6-238P-201ENST00000363313 NXPE4Q6UWF7 544 aa4.82□□□□□ -1.64
RNU6-238P-201ENST00000363313 MPRIPQ6WCQ1 1025 aa4.82□□□□□ -1.64
RNU6-238P-201ENST00000363313 MARCH10Q8NA82 808 aaPredicted RBP4.82□□□□□ -1.64
RNU6-238P-201ENST00000363313 DHX38Q92620 1227 aaKnown RBP4.82□□□□□ -1.64
RNU6-238P-201ENST00000363313 MIPEPQ99797 713 aa4.82□□□□□ -1.64
RNU6-238P-201ENST00000363313 TRIT1Q9H3H1 467 aaKnown RBP4.82□□□□□ -1.64
RNU6-238P-201ENST00000363313 ZNF552Q9H707 407 aaPredicted RBP4.82□□□□□ -1.64
RNU6-238P-201ENST00000363313 RTEL1Q9NZ71 1219 aa4.82□□□□□ -1.64
RNU6-238P-201ENST00000363313 CNTNAP4Q9C0A0 1308 aa4.81□□□□□ -1.64
RNU6-238P-201ENST00000363313 FITM1A5D6W6 292 aa4.81□□□□□ -1.64
RNU6-238P-201ENST00000363313 RFXAPO00287 272 aa4.81□□□□□ -1.64
RNU6-238P-201ENST00000363313 SERPINB4P48594 390 aa4.81□□□□□ -1.64
RNU6-238P-201ENST00000363313 TNK2Q07912 1038 aa4.81□□□□□ -1.64
RNU6-238P-201ENST00000363313 NFIXQ14938 502 aa4.81□□□□□ -1.64
RNU6-238P-201ENST00000363313 GAB4Q2WGN9 574 aa4.81□□□□□ -1.64
RNU6-238P-201ENST00000363313 RALGPS1Q5JS13 557 aa4.81□□□□□ -1.64
RNU6-238P-201ENST00000363313 SPPL2CQ8IUH8 684 aa4.81□□□□□ -1.64
RNU6-238P-201ENST00000363313 FBF1Q8TES7 1133 aa4.81□□□□□ -1.64
RNU6-238P-201ENST00000363313 MCOLN1Q9GZU1 580 aa4.81□□□□□ -1.64
RNU6-238P-201ENST00000363313 SP110Q9HB58 689 aa4.81□□□□□ -1.64
RNU6-238P-201ENST00000363313 CBX7O95931 251 aa4.8□□□□□ -1.64
RNU6-238P-201ENST00000363313 BMP7P18075 431 aa4.8□□□□□ -1.64
RNU6-238P-201ENST00000363313 ETV3P41162 512 aa4.8□□□□□ -1.64
RNU6-238P-201ENST00000363313 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.8□□□□□ -1.64
RNU6-238P-201ENST00000363313 ADAMTS10Q9H324 1103 aa4.8□□□□□ -1.64
RNU6-238P-201ENST00000363313 KCNK12Q9HB15 430 aa4.8□□□□□ -1.64
RNU6-238P-201ENST00000363313 CNOT6Q9ULM6 557 aaKnown RBP4.8□□□□□ -1.64
RNU6-238P-201ENST00000363313 YBX2Q9Y2T7 364 aaKnown RBP4.8□□□□□ -1.64
RNU6-238P-201ENST00000363313 A0A0G2JLL6 359 aaPredicted RBP4.79□□□□□ -1.64
RNU6-238P-201ENST00000363313 HRKO00198 91 aa4.79□□□□□ -1.64
RNU6-238P-201ENST00000363313 HK2P52789 917 aa4.79□□□□□ -1.64
RNU6-238P-201ENST00000363313 ERVFC1P60507 584 aa4.79□□□□□ -1.64
RNU6-238P-201ENST00000363313 CHRNEQ04844 493 aa4.79□□□□□ -1.64
RNU6-238P-201ENST00000363313 DSC3Q14574 896 aa4.79□□□□□ -1.64
RNU6-238P-201ENST00000363313 INPP5AQ14642 412 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms