RNA–Protein interactions for RNA: ENST00000362942.1

RNU6-428P-201, Transcript of RNA, U6 small nuclear 428, pseudogene, humanhuman

BASIC

Gene RNU6-428P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-428P-201ENST00000362942 TMEM87BQ96K49 555 aa4.32□□□□□ -1.72
RNU6-428P-201ENST00000362942 LGR6Q9HBX8 967 aa4.32□□□□□ -1.72
RNU6-428P-201ENST00000362942 CAPN10Q9HC96 672 aa4.32□□□□□ -1.72
RNU6-428P-201ENST00000362942 BRMS1Q9HCU9 246 aa4.32□□□□□ -1.72
RNU6-428P-201ENST00000362942 C1GALT1Q9NS00 363 aa4.32□□□□□ -1.72
RNU6-428P-201ENST00000362942 UBP1Q9NZI7 540 aa4.32□□□□□ -1.72
RNU6-428P-201ENST00000362942 LEMD3Q9Y2U8 911 aa4.32□□□□□ -1.72
RNU6-428P-201ENST00000362942 PCDHB14Q9Y5E9 798 aa4.32□□□□□ -1.72
RNU6-428P-201ENST00000362942 GRIN3BO60391 1043 aa4.31□□□□□ -1.72
RNU6-428P-201ENST00000362942 HTR3BO95264 441 aa4.31□□□□□ -1.72
RNU6-428P-201ENST00000362942 CST3P01034 146 aaPredicted RBP4.31□□□□□ -1.72
RNU6-428P-201ENST00000362942 FAM87AP0C7U9 286 aa4.31□□□□□ -1.72
RNU6-428P-201ENST00000362942 NTF4P34130 210 aa4.31□□□□□ -1.72
RNU6-428P-201ENST00000362942 ETV3P41162 512 aa4.31□□□□□ -1.72
RNU6-428P-201ENST00000362942 GK5Q6ZS86 529 aa4.31□□□□□ -1.72
RNU6-428P-201ENST00000362942 FBXO27Q8NI29 283 aa4.31□□□□□ -1.72
RNU6-428P-201ENST00000362942 RASGRP4Q8TDF6 673 aa4.31□□□□□ -1.72
RNU6-428P-201ENST00000362942 SEC16BQ96JE7 1060 aa4.31□□□□□ -1.72
RNU6-428P-201ENST00000362942 FERD3LQ96RJ6 166 aa4.31□□□□□ -1.72
RNU6-428P-201ENST00000362942 CRBNQ96SW2 442 aa4.31□□□□□ -1.72
RNU6-428P-201ENST00000362942 EHMT1Q9H9B1 1298 aa4.31□□□□□ -1.72
RNU6-428P-201ENST00000362942 PRDM10Q9NQV6 1147 aa4.31□□□□□ -1.72
RNU6-428P-201ENST00000362942 PIM2Q9P1W9 311 aa4.31□□□□□ -1.72
RNU6-428P-201ENST00000362942 REV1Q9UBZ9 1251 aa4.31□□□□□ -1.72
RNU6-428P-201ENST00000362942 TJP2Q9UDY2 1190 aa4.31□□□□□ -1.72
RNU6-428P-201ENST00000362942 STRIP2Q9ULQ0 834 aa4.31□□□□□ -1.72
RNU6-428P-201ENST00000362942 RNF112Q9ULX5 631 aa4.31□□□□□ -1.72
RNU6-428P-201ENST00000362942 CYP26A1O43174 497 aa4.3□□□□□ -1.72
RNU6-428P-201ENST00000362942 F13BP05160 661 aa4.3□□□□□ -1.72
RNU6-428P-201ENST00000362942 GJA8P48165 433 aa4.3□□□□□ -1.72
RNU6-428P-201ENST00000362942 ZC3H6P61129 1189 aaKnown RBP4.3□□□□□ -1.72
RNU6-428P-201ENST00000362942 RAD51AP2Q09MP3 1159 aa4.3□□□□□ -1.72
RNU6-428P-201ENST00000362942 CDK5R2Q13319 367 aa4.3□□□□□ -1.72
RNU6-428P-201ENST00000362942 SLBPQ14493 270 aaKnown RBP eCLIP4.3□□□□□ -1.72
RNU6-428P-201ENST00000362942 PRAMEF13Q5VWM6 474 aa4.3□□□□□ -1.72
RNU6-428P-201ENST00000362942 SLFN12Q8IYM2 578 aa4.3□□□□□ -1.72
RNU6-428P-201ENST00000362942 PHACTR4Q8IZ21 702 aa4.3□□□□□ -1.72
RNU6-428P-201ENST00000362942 TOP6BLQ8N6T0 577 aa4.3□□□□□ -1.72
RNU6-428P-201ENST00000362942 ACSF2Q96CM8 615 aaPredicted RBP4.3□□□□□ -1.72
RNU6-428P-201ENST00000362942 CCDC74BQ96LY2 380 aa4.3□□□□□ -1.72
RNU6-428P-201ENST00000362942 MIPEPQ99797 713 aa4.3□□□□□ -1.72
RNU6-428P-201ENST00000362942 DUSP23Q9BVJ7 150 aa4.3□□□□□ -1.72
RNU6-428P-201ENST00000362942 ACBD3Q9H3P7 528 aa4.3□□□□□ -1.72
RNU6-428P-201ENST00000362942 MKNK2Q9HBH9 465 aa4.3□□□□□ -1.72
RNU6-428P-201ENST00000362942 GMIPQ9P107 970 aa4.3□□□□□ -1.72
RNU6-428P-201ENST00000362942 KLHL3Q9UH77 587 aa4.3□□□□□ -1.72
RNU6-428P-201ENST00000362942 TPX2Q9ULW0 747 aaKnown RBP4.3□□□□□ -1.72
RNU6-428P-201ENST00000362942 POLR3KQ9Y2Y1 108 aaPredicted RBP4.3□□□□□ -1.72
RNU6-428P-201ENST00000362942 CORINQ9Y5Q5 1042 aa4.3□□□□□ -1.72
RNU6-428P-201ENST00000362942 GNAT3A8MTJ3 354 aa4.29□□□□□ -1.72
RNU6-428P-201ENST00000362942 IGF2BP3O00425 579 aaKnown RBP eCLIP4.29□□□□□ -1.72
RNU6-428P-201ENST00000362942 DYNC1LI2O43237 492 aaPredicted RBP4.29□□□□□ -1.72
RNU6-428P-201ENST00000362942 COBLO75128 1261 aa4.29□□□□□ -1.72
RNU6-428P-201ENST00000362942 RAG1P15918 1043 aa4.29□□□□□ -1.72
RNU6-428P-201ENST00000362942 GBP1P32455 592 aa4.29□□□□□ -1.72
RNU6-428P-201ENST00000362942 CCNFP41002 786 aa4.29□□□□□ -1.72
RNU6-428P-201ENST00000362942 CRKP46108 304 aa4.29□□□□□ -1.72
RNU6-428P-201ENST00000362942 TNNI2P48788 182 aa4.29□□□□□ -1.72
RNU6-428P-201ENST00000362942 FBXW10Q5XX13 1052 aa4.29□□□□□ -1.72
RNU6-428P-201ENST00000362942 LETMD1Q6P1Q0 360 aa4.29□□□□□ -1.72
RNU6-428P-201ENST00000362942 ZDHHC13Q8IUH4 622 aa4.29□□□□□ -1.72
RNU6-428P-201ENST00000362942 OR6P1Q8NGX9 317 aa4.29□□□□□ -1.72
RNU6-428P-201ENST00000362942 CYB5D2Q8WUJ1 264 aa4.29□□□□□ -1.72
RNU6-428P-201ENST00000362942 CPLX3Q8WVH0 158 aa4.29□□□□□ -1.72
RNU6-428P-201ENST00000362942 PSMG3-AS1Q96PY0 264 aa4.29□□□□□ -1.72
RNU6-428P-201ENST00000362942 FBRSQ9HAH7 460 aa4.29□□□□□ -1.72
RNU6-428P-201ENST00000362942 PRDM5Q9NQX1 630 aaPredicted RBP4.29□□□□□ -1.72
RNU6-428P-201ENST00000362942 IGSF5Q9NSI5 407 aa4.29□□□□□ -1.72
RNU6-428P-201ENST00000362942 MAPK8IP1Q9UQF2 711 aa4.29□□□□□ -1.72
RNU6-428P-201ENST00000362942 FAM170BA6NMN3 283 aa4.28□□□□□ -1.72
RNU6-428P-201ENST00000362942 FOSL1P15407 271 aa4.28□□□□□ -1.72
RNU6-428P-201ENST00000362942 ADMP35318 185 aa4.28□□□□□ -1.72
RNU6-428P-201ENST00000362942 KIR3DL1P43629 444 aa4.28□□□□□ -1.72
RNU6-428P-201ENST00000362942 SOX9P48436 509 aa4.28□□□□□ -1.72
RNU6-428P-201ENST00000362942 CLCQ05315 142 aa4.28□□□□□ -1.72
RNU6-428P-201ENST00000362942 NKG7Q16617 165 aa4.28□□□□□ -1.72
RNU6-428P-201ENST00000362942 SFRP5Q5T4F7 317 aa4.28□□□□□ -1.72
RNU6-428P-201ENST00000362942 ZNF765Q7L2R6 523 aa4.28□□□□□ -1.72
RNU6-428P-201ENST00000362942 SLC43A3Q8NBI5 491 aa4.28□□□□□ -1.72
RNU6-428P-201ENST00000362942 XAGE3Q8WTP9 111 aa4.28□□□□□ -1.72
RNU6-428P-201ENST00000362942 TMEM40Q8WWA1 233 aa4.28□□□□□ -1.72
RNU6-428P-201ENST00000362942 GATA6Q92908 595 aa4.28□□□□□ -1.72
RNU6-428P-201ENST00000362942 LRRC4CQ9HCJ2 640 aa4.28□□□□□ -1.72
RNU6-428P-201ENST00000362942 ZNRF3Q9ULT6 936 aa4.28□□□□□ -1.72
RNU6-428P-201ENST00000362942 EFR3BQ9Y2G0 817 aa4.28□□□□□ -1.72
RNU6-428P-201ENST00000362942 SLC12A7Q9Y666 1083 aa4.28□□□□□ -1.72
RNU6-428P-201ENST00000362942 SLC22A31A6NKX4 558 aa4.27□□□□□ -1.73
RNU6-428P-201ENST00000362942 MEIS3P2A8K0S8 358 aa4.27□□□□□ -1.73
RNU6-428P-201ENST00000362942 CHURC1-FNTBB4DL54 471 aa4.27□□□□□ -1.73
RNU6-428P-201ENST00000362942 SLITRK5O94991 958 aa4.27□□□□□ -1.73
RNU6-428P-201ENST00000362942 SSBP05455 408 aaKnown RBP eCLIP4.27□□□□□ -1.73
RNU6-428P-201ENST00000362942 EIF6P56537 245 aaKnown RBP4.27□□□□□ -1.73
RNU6-428P-201ENST00000362942 RNF4P78317 190 aa4.27□□□□□ -1.73
RNU6-428P-201ENST00000362942 ARID5AQ03989 594 aa4.27□□□□□ -1.73
RNU6-428P-201ENST00000362942 CDCP2Q5VXM1 449 aa4.27□□□□□ -1.73
RNU6-428P-201ENST00000362942 NLRC3Q7RTR2 1065 aa4.27□□□□□ -1.73
RNU6-428P-201ENST00000362942 RBBP8NLQ8NC74 664 aaPredicted RBP4.27□□□□□ -1.73
RNU6-428P-201ENST00000362942 MISP3Q96FF7 219 aa4.27□□□□□ -1.73
RNU6-428P-201ENST00000362942 C8orf37Q96NL8 207 aa4.27□□□□□ -1.73
RNU6-428P-201ENST00000362942 TM9SF2Q99805 663 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms