RNA–Protein interactions for RNA: ENST00000359671.5

FN1-206, Transcript of fibronectin 1, humanhuman

TSL 5 BASIC

Gene FN1, Length 8,524 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-206ENST00000359671 SMCR8Q8TEV9 937 aaPredicted RBP13.4□□□□□ -0.26
FN1-206ENST00000359671 ELMSAN1Q6PJG2 1045 aa13.4□□□□□ -0.26
FN1-206ENST00000359671 PANK2Q9BZ23 570 aa13.4□□□□□ -0.26
FN1-206ENST00000359671 SLC39A6Q13433 755 aa13.4□□□□□ -0.26
FN1-206ENST00000359671 PDZD4Q76G19 769 aaPredicted RBP13.4□□□□□ -0.26
FN1-206ENST00000359671 PAIP2Q9BPZ3 127 aaKnown RBP13.4□□□□□ -0.26
FN1-206ENST00000359671 HDXQ7Z353 690 aa13.39□□□□□ -0.27
FN1-206ENST00000359671 CNKSR1Q969H4 720 aa13.39□□□□□ -0.27
FN1-206ENST00000359671 SYNRGQ9UMZ2 1314 aa13.39□□□□□ -0.27
FN1-206ENST00000359671 VAMP4O75379 141 aa13.39□□□□□ -0.27
FN1-206ENST00000359671 AOPEPQ8N6M6 819 aa13.39□□□□□ -0.27
FN1-206ENST00000359671 RAB3IPQ96QF0 476 aaPredicted RBP13.39□□□□□ -0.27
FN1-206ENST00000359671 NCAPGQ9BPX3 1015 aa13.39□□□□□ -0.27
FN1-206ENST00000359671 DACT1Q9NYF0 836 aa13.39□□□□□ -0.27
FN1-206ENST00000359671 TCHHQ07283 1943 aa13.39□□□□□ -0.27
FN1-206ENST00000359671 SMC5Q8IY18 1101 aa13.39□□□□□ -0.27
FN1-206ENST00000359671 IFT20Q8IY31 132 aa13.39□□□□□ -0.27
FN1-206ENST00000359671 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.39□□□□□ -0.278e-28■■■□□ 14.7
FN1-206ENST00000359671 ERICH4A6NGS2 130 aa13.39□□□□□ -0.27
FN1-206ENST00000359671 MBD4O95243 580 aa13.39□□□□□ -0.27
FN1-206ENST00000359671 TNNI3KQ59H18 835 aa13.39□□□□□ -0.27
FN1-206ENST00000359671 ZNF713Q8N859 430 aaPredicted RBP13.39□□□□□ -0.27
FN1-206ENST00000359671 TRPC6Q9Y210 931 aa13.39□□□□□ -0.27
FN1-206ENST00000359671 FPGT-TNNI3KV9GXZ4 949 aa13.39□□□□□ -0.27
FN1-206ENST00000359671 SBNO2Q9Y2G9 1366 aa13.39□□□□□ -0.27
FN1-206ENST00000359671 FAM135BQ49AJ0 1406 aa13.39□□□□□ -0.27
FN1-206ENST00000359671 KBTBD3Q8NAB2 608 aa13.39□□□□□ -0.27
FN1-206ENST00000359671 NOC4LQ9BVI4 516 aaKnown RBP13.39□□□□□ -0.27
FN1-206ENST00000359671 GJA3Q9Y6H8 435 aa13.39□□□□□ -0.27
FN1-206ENST00000359671 MAP3K4Q9Y6R4 1608 aa13.38□□□□□ -0.27
FN1-206ENST00000359671 MAP3K19Q56UN5 1328 aa13.38□□□□□ -0.27
FN1-206ENST00000359671 VWA3AA6NCI4 1184 aa13.38□□□□□ -0.27
FN1-206ENST00000359671 EIF3CLB5ME19 914 aaKnown RBP13.38□□□□□ -0.27
FN1-206ENST00000359671 SEMA3EO15041 775 aa13.38□□□□□ -0.27
FN1-206ENST00000359671 SND1Q7KZF4 910 aaKnown RBP eCLIP13.38□□□□□ -0.272e-6■■■□□ 17.5
FN1-206ENST00000359671 RNF34Q969K3 372 aa13.38□□□□□ -0.27
FN1-206ENST00000359671 EIF3CQ99613 913 aaKnown RBP13.38□□□□□ -0.27
FN1-206ENST00000359671 SPOPO43791 374 aa13.38□□□□□ -0.27
FN1-206ENST00000359671 SLC4A8Q2Y0W8 1093 aa13.38□□□□□ -0.27
FN1-206ENST00000359671 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.38□□□□□ -0.271e-323■□□□□ 9.4
FN1-206ENST00000359671 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.38□□□□□ -0.274e-6■■■□□ 15.9
FN1-206ENST00000359671 DLGAP5Q15398 846 aa13.38□□□□□ -0.27
FN1-206ENST00000359671 C20orf194Q5TEA3 1177 aa13.38□□□□□ -0.27
FN1-206ENST00000359671 TRMT1LQ7Z2T5 733 aaKnown RBP13.38□□□□□ -0.27
FN1-206ENST00000359671 GOLGA8QA0A0J9YX86 632 aa13.38□□□□□ -0.27
FN1-206ENST00000359671 GOLGA8OA6NCC3 632 aa13.38□□□□□ -0.27
FN1-206ENST00000359671 GOLGA8NF8WBI6 632 aa13.38□□□□□ -0.27
FN1-206ENST00000359671 DSCC1Q9BVC3 393 aa13.38□□□□□ -0.27
FN1-206ENST00000359671 VCXQ9H320 206 aa13.38□□□□□ -0.27
FN1-206ENST00000359671 BRPF3Q9ULD4 1205 aa13.38□□□□□ -0.27
FN1-206ENST00000359671 CNPY2Q9Y2B0 182 aa13.38□□□□□ -0.27
FN1-206ENST00000359671 TRPM1Q7Z4N2 1603 aa13.38□□□□□ -0.27
FN1-206ENST00000359671 CHMLP26374 656 aa13.38□□□□□ -0.27
FN1-206ENST00000359671 POLR2BP30876 1174 aaKnown RBP13.38□□□□□ -0.27
FN1-206ENST00000359671 PFDN4Q9NQP4 134 aa13.38□□□□□ -0.27
FN1-206ENST00000359671 ZBTB40Q9NUA8 1239 aa13.38□□□□□ -0.27
FN1-206ENST00000359671 PLEKHG1Q9ULL1 1385 aa13.38□□□□□ -0.27
FN1-206ENST00000359671 EBAG9O00559 213 aa13.38□□□□□ -0.27
FN1-206ENST00000359671 GIGYF1O75420 1035 aaPredicted RBP13.38□□□□□ -0.27
FN1-206ENST00000359671 GIMAP6Q6P9H5 292 aa13.38□□□□□ -0.27
FN1-206ENST00000359671 RUFY4Q6ZNE9 571 aa13.38□□□□□ -0.27
FN1-206ENST00000359671 CCDC169A6NNP5 214 aa13.38□□□□□ -0.27
FN1-206ENST00000359671 XPOTO43592 962 aaKnown RBP13.38□□□□□ -0.27
FN1-206ENST00000359671 ZNF772Q68DY9 489 aaPredicted RBP13.38□□□□□ -0.27
FN1-206ENST00000359671 CCDC121Q6ZUS5 278 aa13.38□□□□□ -0.27
FN1-206ENST00000359671 LAD1O00515 517 aa13.37□□□□□ -0.27
FN1-206ENST00000359671 GPAA1O43292 621 aa13.37□□□□□ -0.27
FN1-206ENST00000359671 MPNDQ8N594 471 aa13.37□□□□□ -0.27
FN1-206ENST00000359671 C8orf58Q8NAV2 365 aa13.37□□□□□ -0.27
FN1-206ENST00000359671 PALM3A6NDB9 673 aaPredicted RBP13.37□□□□□ -0.27
FN1-206ENST00000359671 F8W8V4 182 aa13.37□□□□□ -0.27
FN1-206ENST00000359671 TNFAIP3P21580 790 aa13.37□□□□□ -0.27
FN1-206ENST00000359671 ASIC2Q16515 512 aa13.37□□□□□ -0.27
FN1-206ENST00000359671 LETM2Q2VYF4 491 aa13.37□□□□□ -0.27
FN1-206ENST00000359671 EYA1Q99502 592 aa13.37□□□□□ -0.27
FN1-206ENST00000359671 BAG1Q99933 345 aaPredicted RBP13.37□□□□□ -0.27
FN1-206ENST00000359671 MRPL11Q9Y3B7 192 aaKnown RBP13.37□□□□□ -0.27
FN1-206ENST00000359671 PCDHB13Q9Y5F0 798 aa13.37□□□□□ -0.27
FN1-206ENST00000359671 GEN1Q17RS7 908 aa13.37□□□□□ -0.27
FN1-206ENST00000359671 RAB17Q9H0T7 212 aa13.37□□□□□ -0.27
FN1-206ENST00000359671 ZRANB1Q9UGI0 708 aa13.37□□□□□ -0.27
FN1-206ENST00000359671 KDM6BO15054 1643 aa13.37□□□□□ -0.27
FN1-206ENST00000359671 PSDA5PKW4 1024 aaPredicted RBP13.37□□□□□ -0.27
FN1-206ENST00000359671 THAP12O43422 761 aa13.37□□□□□ -0.27
FN1-206ENST00000359671 IPO11Q9UI26 975 aaKnown RBP13.37□□□□□ -0.27
FN1-206ENST00000359671 USP21Q9UK80 565 aa13.37□□□□□ -0.27
FN1-206ENST00000359671 ATP2B4P23634 1241 aa13.37□□□□□ -0.27
FN1-206ENST00000359671 AK2P54819 239 aa13.37□□□□□ -0.27
FN1-206ENST00000359671 GCKRQ14397 625 aa13.37□□□□□ -0.27
FN1-206ENST00000359671 MIGA1Q8NAN2 632 aa13.37□□□□□ -0.27
FN1-206ENST00000359671 RUNDC3BQ96NL0 473 aa13.37□□□□□ -0.27
FN1-206ENST00000359671 ADPGKQ9BRR6 497 aa13.37□□□□□ -0.27
FN1-206ENST00000359671 MRPL44Q9H9J2 332 aaKnown RBP13.37□□□□□ -0.27
FN1-206ENST00000359671 SAMD9LQ8IVG5 1584 aa13.37□□□□□ -0.27
FN1-206ENST00000359671 KDRP35968 1356 aa13.37□□□□□ -0.27
FN1-206ENST00000359671 CCNA1P78396 465 aa13.37□□□□□ -0.27
FN1-206ENST00000359671 ARID5AQ03989 594 aa13.37□□□□□ -0.27
FN1-206ENST00000359671 PPFIA1Q13136 1202 aa13.37□□□□□ -0.27
FN1-206ENST00000359671 ATP8A2Q9NTI2 1148 aa13.37□□□□□ -0.27
FN1-206ENST00000359671 DISP1Q96F81 1524 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms