RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 RBM28Q9NW13 759 aaKnown RBP17.24■□□□□ 0.35
GABPB1-202ENST00000359031 CYP2D7A0A087X1C5 515 aa17.23■□□□□ 0.35
GABPB1-202ENST00000359031 USP17L12C9JPN9 530 aa17.23■□□□□ 0.35
GABPB1-202ENST00000359031 USP17L21D6R901 530 aa17.23■□□□□ 0.35
GABPB1-202ENST00000359031 ZNF500O60304 480 aaPredicted RBP17.23■□□□□ 0.35
GABPB1-202ENST00000359031 DDAH1O94760 285 aa17.23■□□□□ 0.35
GABPB1-202ENST00000359031 MMP1P03956 469 aa17.23■□□□□ 0.35
GABPB1-202ENST00000359031 LDHBP07195 334 aaKnown RBP17.23■□□□□ 0.35
GABPB1-202ENST00000359031 ATP2B4P23634 1241 aa17.23■□□□□ 0.35
GABPB1-202ENST00000359031 IFIT1BQ5T764 474 aaKnown RBP17.23■□□□□ 0.35
GABPB1-202ENST00000359031 CATIPQ7Z7H3 387 aa17.23■□□□□ 0.35
GABPB1-202ENST00000359031 ZNF526Q8TF50 670 aaPredicted RBP17.23■□□□□ 0.35
GABPB1-202ENST00000359031 NUP133Q8WUM0 1156 aa17.23■□□□□ 0.35
GABPB1-202ENST00000359031 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.23■□□□□ 0.35
GABPB1-202ENST00000359031 RNF26Q9BY78 433 aaPredicted RBP17.23■□□□□ 0.35
GABPB1-202ENST00000359031 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.23■□□□□ 0.35
GABPB1-202ENST00000359031 NRXN2Q9P2S2 1712 aa17.23■□□□□ 0.35
GABPB1-202ENST00000359031 CDK5RAP2Q96SN8 1893 aa17.22■□□□□ 0.35
GABPB1-202ENST00000359031 CERS3Q8IU89 383 aa17.22■□□□□ 0.35
GABPB1-202ENST00000359031 DDX60LQ5H9U9 1706 aaKnown RBP17.22■□□□□ 0.35
GABPB1-202ENST00000359031 CMA1P23946 247 aa17.21■□□□□ 0.35
GABPB1-202ENST00000359031 HOXA10P31260 410 aaPredicted RBP17.21■□□□□ 0.35
GABPB1-202ENST00000359031 AXDND1Q5T1B0 1012 aaPredicted RBP17.21■□□□□ 0.35
GABPB1-202ENST00000359031 FOXP1Q9H334 677 aaPredicted RBP17.21■□□□□ 0.35
GABPB1-202ENST00000359031 ROBO3Q96MS0 1386 aa17.21■□□□□ 0.35
GABPB1-202ENST00000359031 ANKRD31Q8N7Z5 1873 aa17.21■□□□□ 0.35
GABPB1-202ENST00000359031 ZNF165P49910 485 aa17.21■□□□□ 0.35
GABPB1-202ENST00000359031 NDUFA8P51970 172 aa17.21■□□□□ 0.35
GABPB1-202ENST00000359031 GPSM2P81274 684 aa17.21■□□□□ 0.35
GABPB1-202ENST00000359031 PDE4BQ07343 736 aa17.21■□□□□ 0.35
GABPB1-202ENST00000359031 PTPAQ15257 358 aa17.21■□□□□ 0.35
GABPB1-202ENST00000359031 TMC4Q7Z404 712 aa17.21■□□□□ 0.35
GABPB1-202ENST00000359031 LUZP1Q86V48 1076 aa17.21■□□□□ 0.35
GABPB1-202ENST00000359031 NOSTRINQ8IVI9 506 aa17.21■□□□□ 0.35
GABPB1-202ENST00000359031 MAP3K14Q99558 947 aa17.21■□□□□ 0.35
GABPB1-202ENST00000359031 DNAJC25Q9H1X3 360 aa17.21■□□□□ 0.35
GABPB1-202ENST00000359031 ANO10Q9NW15 660 aa17.21■□□□□ 0.35
GABPB1-202ENST00000359031 A0A1B0GVL5 298 aa17.2■□□□□ 0.34
GABPB1-202ENST00000359031 SMIM22K7EJ46 135 aa17.2■□□□□ 0.34
GABPB1-202ENST00000359031 BBOX1O75936 387 aa17.2■□□□□ 0.34
GABPB1-202ENST00000359031 UFL1O94874 794 aa17.2■□□□□ 0.34
GABPB1-202ENST00000359031 TPM3P06753 285 aa17.2■□□□□ 0.34
GABPB1-202ENST00000359031 LDHCP07864 332 aa17.2■□□□□ 0.34
GABPB1-202ENST00000359031 CRAMP1Q96RY5 1269 aa17.2■□□□□ 0.34
GABPB1-202ENST00000359031 NOL10Q9BSC4 688 aaKnown RBP17.2■□□□□ 0.34
GABPB1-202ENST00000359031 GGA1Q9UJY5 639 aa17.2■□□□□ 0.34
GABPB1-202ENST00000359031 GOLGB1Q14789 3259 aaKnown RBP17.19■□□□□ 0.34
GABPB1-202ENST00000359031 FAM237AA0A1B0GTK4 181 aa17.19■□□□□ 0.34
GABPB1-202ENST00000359031 POLRMTO00411 1230 aaKnown RBP17.19■□□□□ 0.34
GABPB1-202ENST00000359031 BAG3O95817 575 aa17.19■□□□□ 0.34
GABPB1-202ENST00000359031 XBP1P17861 261 aa17.19■□□□□ 0.34
GABPB1-202ENST00000359031 GUCY1A2P33402 732 aa17.19■□□□□ 0.34
GABPB1-202ENST00000359031 PPP4CP60510 307 aa17.19■□□□□ 0.34
GABPB1-202ENST00000359031 AKAP17AQ02040 695 aaKnown RBP17.19■□□□□ 0.34
GABPB1-202ENST00000359031 DDR1Q08345 913 aa17.19■□□□□ 0.34
GABPB1-202ENST00000359031 DIS3L2Q8IYB7 885 aaKnown RBP17.19■□□□□ 0.34
GABPB1-202ENST00000359031 TIGD1Q96MW7 591 aa17.19■□□□□ 0.34
GABPB1-202ENST00000359031 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.19■□□□□ 0.34
GABPB1-202ENST00000359031 PODXL2Q9NZ53 605 aa17.19■□□□□ 0.34
GABPB1-202ENST00000359031 CD2APQ9Y5K6 639 aa17.19■□□□□ 0.34
GABPB1-202ENST00000359031 MROH7-TTC4A0A0A0MT08 1334 aa17.18■□□□□ 0.34
GABPB1-202ENST00000359031 KLRG2A4D1S0 409 aaPredicted RBP17.18■□□□□ 0.34
GABPB1-202ENST00000359031 GOLGA6L6A8MZA4 724 aa17.18■□□□□ 0.34
GABPB1-202ENST00000359031 UBE2Q2LH0YL09 131 aa17.18■□□□□ 0.34
GABPB1-202ENST00000359031 AP5Z1O43299 807 aa17.18■□□□□ 0.34
GABPB1-202ENST00000359031 PRPF3O43395 683 aaKnown RBP17.18■□□□□ 0.34
GABPB1-202ENST00000359031 PRDM1O75626 825 aa17.18■□□□□ 0.34
GABPB1-202ENST00000359031 IL1R1P14778 569 aa17.18■□□□□ 0.34
GABPB1-202ENST00000359031 PFKFB1P16118 471 aa17.18■□□□□ 0.34
GABPB1-202ENST00000359031 PLCB2Q00722 1185 aa17.18■□□□□ 0.34
GABPB1-202ENST00000359031 RILPL1Q5EBL4 403 aa17.18■□□□□ 0.34
GABPB1-202ENST00000359031 MKRN1Q9UHC7 482 aaKnown RBP17.18■□□□□ 0.34
GABPB1-202ENST00000359031 JAG2Q9Y219 1238 aa17.18■□□□□ 0.34
GABPB1-202ENST00000359031 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.18■□□□□ 0.343e-6■■■■□ 21.7
GABPB1-202ENST00000359031 FOCADQ5VW36 1801 aa17.18■□□□□ 0.34
GABPB1-202ENST00000359031 CUTAO60888 179 aa17.18■□□□□ 0.34
GABPB1-202ENST00000359031 WDHD1O75717 1129 aaPredicted RBP17.18■□□□□ 0.34
GABPB1-202ENST00000359031 USP5P45974 858 aa17.18■□□□□ 0.34
GABPB1-202ENST00000359031 FUT2Q10981 343 aa17.18■□□□□ 0.34
GABPB1-202ENST00000359031 TROAPQ12815 778 aa17.18■□□□□ 0.34
GABPB1-202ENST00000359031 AMOTL1Q8IY63 956 aa17.18■□□□□ 0.34
GABPB1-202ENST00000359031 FLAD1Q8NFF5 587 aa17.18■□□□□ 0.34
GABPB1-202ENST00000359031 SDF4Q9BRK5 362 aa17.18■□□□□ 0.34
GABPB1-202ENST00000359031 CD209Q9NNX6 404 aa17.18■□□□□ 0.34
GABPB1-202ENST00000359031 MCM9Q9NXL9 1143 aa17.18■□□□□ 0.34
GABPB1-202ENST00000359031 BTBD18B2RXH4 712 aa17.17■□□□□ 0.34
GABPB1-202ENST00000359031 CYP2D6P10635 497 aa17.17■□□□□ 0.34
GABPB1-202ENST00000359031 HSPA6P17066 643 aa17.17■□□□□ 0.34
GABPB1-202ENST00000359031 IQCB1Q15051 598 aa17.17■□□□□ 0.34
GABPB1-202ENST00000359031 C12orf60Q5U649 245 aa17.17■□□□□ 0.34
GABPB1-202ENST00000359031 TMTC3Q6ZXV5 915 aa17.17■□□□□ 0.34
GABPB1-202ENST00000359031 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.17■□□□□ 0.34
GABPB1-202ENST00000359031 SLC51AQ86UW1 340 aa17.17■□□□□ 0.34
GABPB1-202ENST00000359031 CEP57L1Q8IYX8 460 aa17.17■□□□□ 0.34
GABPB1-202ENST00000359031 NAT10Q9H0A0 1025 aaKnown RBP17.17■□□□□ 0.34
GABPB1-202ENST00000359031 HPSEQ9Y251 543 aa17.17■□□□□ 0.34
GABPB1-202ENST00000359031 GOLGA6L19H0YKK7 550 aa17.16■□□□□ 0.34
GABPB1-202ENST00000359031 ZNF202O95125 648 aa17.16■□□□□ 0.34
GABPB1-202ENST00000359031 MARCKSP29966 332 aaPredicted RBP17.16■□□□□ 0.34
GABPB1-202ENST00000359031 CCDC178Q5BJE1 867 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms