RNA–Protein interactions for RNA: ENST00000359001.9

KCNIP4-201, Transcript of potassium voltage-gated channel interacting protein 4, humanhuman

TSL 1 (best) BASIC

Gene KCNIP4, Length 2,168 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4-201ENST00000359001 GRIN1Q05586 938 aa8.12□□□□□ -1.11
KCNIP4-201ENST00000359001 NR5A1Q13285 461 aa8.12□□□□□ -1.11
KCNIP4-201ENST00000359001 SAFBQ15424 915 aaKnown RBP eCLIP8.12□□□□□ -1.11
KCNIP4-201ENST00000359001 ZRSR1Q15695 479 aaKnown RBP8.12□□□□□ -1.11
KCNIP4-201ENST00000359001 NT5DC1Q5TFE4 455 aa8.12□□□□□ -1.11
KCNIP4-201ENST00000359001 TBC1D9BQ66K14 1250 aa8.12□□□□□ -1.11
KCNIP4-201ENST00000359001 ARMCX5Q6P1M9 558 aa8.12□□□□□ -1.11
KCNIP4-201ENST00000359001 ZNF579Q8NAF0 562 aaKnown RBP8.12□□□□□ -1.11
KCNIP4-201ENST00000359001 ESR2Q92731 530 aa8.12□□□□□ -1.11
KCNIP4-201ENST00000359001 UBAC1Q9BSL1 405 aa8.12□□□□□ -1.11
KCNIP4-201ENST00000359001 TOMM22Q9NS69 142 aa8.12□□□□□ -1.11
KCNIP4-201ENST00000359001 RAI14Q9P0K7 980 aa8.12□□□□□ -1.11
KCNIP4-201ENST00000359001 IFNKQ9P0W0 207 aa8.12□□□□□ -1.11
KCNIP4-201ENST00000359001 ABCF2Q9UG63 623 aa8.12□□□□□ -1.11
KCNIP4-201ENST00000359001 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.12□□□□□ -1.11
KCNIP4-201ENST00000359001 MYO1BO43795 1136 aa8.11□□□□□ -1.11
KCNIP4-201ENST00000359001 BMP6P22004 513 aa8.11□□□□□ -1.11
KCNIP4-201ENST00000359001 KLRK1P26718 216 aa8.11□□□□□ -1.11
KCNIP4-201ENST00000359001 MYL5Q02045 173 aa8.11□□□□□ -1.11
KCNIP4-201ENST00000359001 CCAR2Q8N163 923 aaKnown RBP8.11□□□□□ -1.11
KCNIP4-201ENST00000359001 CMTR1Q8N1G2 835 aaKnown RBP8.11□□□□□ -1.11
KCNIP4-201ENST00000359001 CCDC150Q8NCX0 1101 aa8.11□□□□□ -1.11
KCNIP4-201ENST00000359001 OXER1Q8TDS5 423 aa8.11□□□□□ -1.11
KCNIP4-201ENST00000359001 NSUN4Q96CB9 384 aaKnown RBP8.11□□□□□ -1.11
KCNIP4-201ENST00000359001 ZSCAN10Q96SZ4 725 aaPredicted RBP8.11□□□□□ -1.11
KCNIP4-201ENST00000359001 PCDHB6Q9Y5E3 794 aa8.11□□□□□ -1.11
KCNIP4-201ENST00000359001 PCDHA5Q9Y5H7 936 aa8.11□□□□□ -1.11
KCNIP4-201ENST00000359001 CYP2D7A0A087X1C5 515 aa8.11□□□□□ -1.11
KCNIP4-201ENST00000359001 MINDY4BA8MYZ0 360 aa8.11□□□□□ -1.11
KCNIP4-201ENST00000359001 FOXN1O15353 648 aa8.11□□□□□ -1.11
KCNIP4-201ENST00000359001 PRPF3O43395 683 aaKnown RBP8.11□□□□□ -1.11
KCNIP4-201ENST00000359001 ATP1A3P13637 1013 aa8.11□□□□□ -1.11
KCNIP4-201ENST00000359001 SARSP49591 514 aaKnown RBP8.11□□□□□ -1.11
KCNIP4-201ENST00000359001 TPM4P67936 248 aa8.11□□□□□ -1.11
KCNIP4-201ENST00000359001 FANCCQ00597 558 aa8.11□□□□□ -1.11
KCNIP4-201ENST00000359001 TROAPQ12815 778 aa8.11□□□□□ -1.11
KCNIP4-201ENST00000359001 SYCP1Q15431 976 aa8.11□□□□□ -1.11
KCNIP4-201ENST00000359001 TPD52L1Q16890 204 aaPredicted RBP8.11□□□□□ -1.11
KCNIP4-201ENST00000359001 CAVIN4Q5BKX8 364 aa8.11□□□□□ -1.11
KCNIP4-201ENST00000359001 RC3H1Q5TC82 1133 aaKnown RBP8.11□□□□□ -1.11
KCNIP4-201ENST00000359001 CTR9Q6PD62 1173 aa8.11□□□□□ -1.11
KCNIP4-201ENST00000359001 CNNM3Q8NE01 707 aa8.11□□□□□ -1.11
KCNIP4-201ENST00000359001 NUP133Q8WUM0 1156 aa8.11□□□□□ -1.11
KCNIP4-201ENST00000359001 TNFRSF25Q93038 417 aa8.11□□□□□ -1.11
KCNIP4-201ENST00000359001 PHF20Q9BVI0 1012 aa8.11□□□□□ -1.11
KCNIP4-201ENST00000359001 PAXBP1Q9Y5B6 917 aa8.11□□□□□ -1.11
KCNIP4-201ENST00000359001 SRPRBQ9Y5M8 271 aaKnown RBP8.11□□□□□ -1.11
KCNIP4-201ENST00000359001 ACTN4O43707 911 aaKnown RBP8.1□□□□□ -1.11
KCNIP4-201ENST00000359001 ORC4O43929 436 aa8.1□□□□□ -1.11
KCNIP4-201ENST00000359001 DDAH1O94760 285 aa8.1□□□□□ -1.11
KCNIP4-201ENST00000359001 SMC2O95347 1197 aa8.1□□□□□ -1.11
KCNIP4-201ENST00000359001 PRKCSHP14314 528 aaPredicted RBP8.1□□□□□ -1.11
KCNIP4-201ENST00000359001 LMOD1P29536 600 aaPredicted RBP8.1□□□□□ -1.11
KCNIP4-201ENST00000359001 PDE4BQ07343 736 aa8.1□□□□□ -1.11
KCNIP4-201ENST00000359001 DHX8Q14562 1220 aaKnown RBP8.1□□□□□ -1.11
KCNIP4-201ENST00000359001 NPY5RQ15761 445 aa8.1□□□□□ -1.11
KCNIP4-201ENST00000359001 E4F1Q66K89 784 aaPredicted RBP8.1□□□□□ -1.11
KCNIP4-201ENST00000359001 ISM2Q6H9L7 571 aa8.1□□□□□ -1.11
KCNIP4-201ENST00000359001 TMC6Q7Z403 805 aa8.1□□□□□ -1.11
KCNIP4-201ENST00000359001 SPATA20Q8TB22 786 aa8.1□□□□□ -1.11
KCNIP4-201ENST00000359001 DPF2Q92785 391 aa8.1□□□□□ -1.11
KCNIP4-201ENST00000359001 NARFQ9UHQ1 456 aa8.1□□□□□ -1.11
KCNIP4-201ENST00000359001 CNTNAP5Q8WYK1 1306 aa8.1□□□□□ -1.11
KCNIP4-201ENST00000359001 PLEKHA8P1O95397 391 aa8.1□□□□□ -1.11
KCNIP4-201ENST00000359001 PRR29P0C7W0 189 aa8.1□□□□□ -1.11
KCNIP4-201ENST00000359001 EVX2Q03828 476 aa8.1□□□□□ -1.11
KCNIP4-201ENST00000359001 NCBP1Q09161 790 aaKnown RBP8.1□□□□□ -1.11
KCNIP4-201ENST00000359001 POSTNQ15063 836 aa8.1□□□□□ -1.11
KCNIP4-201ENST00000359001 EARS2Q5JPH6 523 aaKnown RBP8.1□□□□□ -1.11
KCNIP4-201ENST00000359001 SPECC1Q5M775 1068 aa8.1□□□□□ -1.11
KCNIP4-201ENST00000359001 CEP135Q66GS9 1140 aa8.1□□□□□ -1.11
KCNIP4-201ENST00000359001 TMED8Q6PL24 325 aaPredicted RBP8.1□□□□□ -1.11
KCNIP4-201ENST00000359001 CCDC82Q8N4S0 544 aa8.1□□□□□ -1.11
KCNIP4-201ENST00000359001 NOL10Q9BSC4 688 aaKnown RBP8.1□□□□□ -1.11
KCNIP4-201ENST00000359001 RBM28Q9NW13 759 aaKnown RBP8.1□□□□□ -1.11
KCNIP4-201ENST00000359001 MAN1B1Q9UKM7 699 aa8.1□□□□□ -1.11
KCNIP4-201ENST00000359001 DDX60LQ5H9U9 1706 aaKnown RBP8.09□□□□□ -1.11
KCNIP4-201ENST00000359001 NAV1Q8NEY1 1877 aa8.09□□□□□ -1.11
KCNIP4-201ENST00000359001 PSDA5PKW4 1024 aaPredicted RBP8.09□□□□□ -1.11
KCNIP4-201ENST00000359001 FAM205CA6NFA0 338 aa8.09□□□□□ -1.11
KCNIP4-201ENST00000359001 NUTM2BA6NNL0 878 aaPredicted RBP8.09□□□□□ -1.11
KCNIP4-201ENST00000359001 NUTM2EB1AL46 878 aaPredicted RBP8.09□□□□□ -1.11
KCNIP4-201ENST00000359001 RPS6KA4O75676 772 aa8.09□□□□□ -1.11
KCNIP4-201ENST00000359001 ZNF18P17022 549 aa8.09□□□□□ -1.11
KCNIP4-201ENST00000359001 TM4SF1P30408 202 aa8.09□□□□□ -1.11
KCNIP4-201ENST00000359001 KCNQ4P56696 695 aa8.09□□□□□ -1.11
KCNIP4-201ENST00000359001 RPS8P62241 208 aaKnown RBP8.09□□□□□ -1.11
KCNIP4-201ENST00000359001 MECOMQ03112 1051 aa8.09□□□□□ -1.11
KCNIP4-201ENST00000359001 MORC3Q14149 939 aa8.09□□□□□ -1.11
KCNIP4-201ENST00000359001 VPS72Q15906 364 aa8.09□□□□□ -1.11
KCNIP4-201ENST00000359001 IFIT1BQ5T764 474 aaKnown RBP8.09□□□□□ -1.11
KCNIP4-201ENST00000359001 TMTC3Q6ZXV5 915 aa8.09□□□□□ -1.11
KCNIP4-201ENST00000359001 SMIM5Q71RC9 77 aa8.09□□□□□ -1.11
KCNIP4-201ENST00000359001 PTF1AQ7RTS3 328 aa8.09□□□□□ -1.11
KCNIP4-201ENST00000359001 NUTM2AQ8IVF1 878 aaPredicted RBP8.09□□□□□ -1.11
KCNIP4-201ENST00000359001 TRIML1Q8N9V2 468 aa8.09□□□□□ -1.11
KCNIP4-201ENST00000359001 NYXQ9GZU5 481 aa8.09□□□□□ -1.11
KCNIP4-201ENST00000359001 DCP1AQ9NPI6 582 aaPredicted RBP8.09□□□□□ -1.11
KCNIP4-201ENST00000359001 INTS13Q9NVM9 706 aa8.09□□□□□ -1.11
KCNIP4-201ENST00000359001 AATFQ9NY61 560 aaKnown RBP eCLIP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms