RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 USP17L12C9JPN9 530 aa15.35■□□□□ 0.05
VCP-201ENST00000358901 USP17L21D6R901 530 aa15.35■□□□□ 0.05
VCP-201ENST00000358901 CETN3O15182 167 aa15.35■□□□□ 0.05
VCP-201ENST00000358901 ARID4AP29374 1257 aaPredicted RBP15.35■□□□□ 0.05
VCP-201ENST00000358901 RBM6P78332 1123 aaKnown RBP15.35■□□□□ 0.05
VCP-201ENST00000358901 TTC31Q49AM3 519 aaPredicted RBP15.35■□□□□ 0.05
VCP-201ENST00000358901 HERC4Q5GLZ8 1057 aaPredicted RBP15.35■□□□□ 0.05
VCP-201ENST00000358901 FAM47AQ5JRC9 791 aa15.35■□□□□ 0.05
VCP-201ENST00000358901 ANKS4BQ8N8V4 417 aa15.35■□□□□ 0.05
VCP-201ENST00000358901 TDRD7Q8NHU6 1098 aaKnown RBP15.35■□□□□ 0.05
VCP-201ENST00000358901 CACTINQ8WUQ7 758 aaKnown RBP15.35■□□□□ 0.05
VCP-201ENST00000358901 NUP58Q9BVL2 599 aa15.35■□□□□ 0.05
VCP-201ENST00000358901 SYNCQ9H7C4 482 aa15.35■□□□□ 0.05
VCP-201ENST00000358901 PCDHA5Q9Y5H7 936 aa15.35■□□□□ 0.05
VCP-201ENST00000358901 ADCY9O60503 1353 aa15.34■□□□□ 0.05
VCP-201ENST00000358901 GNPATO15228 680 aa15.34■□□□□ 0.05
VCP-201ENST00000358901 TFAP4Q01664 338 aa15.34■□□□□ 0.05
VCP-201ENST00000358901 SNX29Q8TEQ0 813 aa15.34■□□□□ 0.05
VCP-201ENST00000358901 UIMC1Q96RL1 719 aa15.34■□□□□ 0.05
VCP-201ENST00000358901 ZBTB21Q9ULJ3 1066 aa15.34■□□□□ 0.05
VCP-201ENST00000358901 IFNL3Q8IZI9 196 aa15.34■□□□□ 0.05
VCP-201ENST00000358901 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.34■□□□□ 0.05
VCP-201ENST00000358901 METP08581 1390 aa15.34■□□□□ 0.05
VCP-201ENST00000358901 GSTA5Q7RTV2 222 aa15.34■□□□□ 0.05
VCP-201ENST00000358901 FCHSD1Q86WN1 690 aa15.34■□□□□ 0.05
VCP-201ENST00000358901 FANCBQ8NB91 859 aa15.34■□□□□ 0.05
VCP-201ENST00000358901 KIAA1524Q8TCG1 905 aa15.34■□□□□ 0.05
VCP-201ENST00000358901 FAM207AQ9NSI2 230 aaPredicted RBP15.34■□□□□ 0.05
VCP-201ENST00000358901 MTRF1LQ9UGC7 380 aaKnown RBP15.34■□□□□ 0.05
VCP-201ENST00000358901 IGSF1Q8N6C5 1336 aa15.34■□□□□ 0.05
VCP-201ENST00000358901 GOLGA6CA6NDK9 693 aa15.34■□□□□ 0.05
VCP-201ENST00000358901 GOLGA6DP0CG33 693 aa15.34■□□□□ 0.05
VCP-201ENST00000358901 PPARDQ03181 441 aa15.34■□□□□ 0.05
VCP-201ENST00000358901 PUS3Q9BZE2 481 aaKnown RBP15.34■□□□□ 0.05
VCP-201ENST00000358901 GOLGA6AQ9NYA3 693 aa15.34■□□□□ 0.05
VCP-201ENST00000358901 MROH5Q6ZUA9 1318 aa15.33■□□□□ 0.05
VCP-201ENST00000358901 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.33■□□□□ 0.055e-7■■■■□ 21
VCP-201ENST00000358901 PPARAQ07869 468 aa15.33■□□□□ 0.04
VCP-201ENST00000358901 RAD51AP2Q09MP3 1159 aa15.33■□□□□ 0.04
VCP-201ENST00000358901 SLC9C1Q4G0N8 1177 aa15.33■□□□□ 0.04
VCP-201ENST00000358901 C8orf37Q96NL8 207 aa15.33■□□□□ 0.04
VCP-201ENST00000358901 PPP2R2CQ9Y2T4 447 aa15.33■□□□□ 0.04
VCP-201ENST00000358901 PRAMEF22A3QJZ6 481 aa15.33■□□□□ 0.04
VCP-201ENST00000358901 NSUN7Q8NE18 718 aaKnown RBP15.33■□□□□ 0.04
VCP-201ENST00000358901 OR8K1Q8NGG5 319 aa15.33■□□□□ 0.04
VCP-201ENST00000358901 PPP1R14CQ8TAE6 165 aa15.33■□□□□ 0.04
VCP-201ENST00000358901 NOX5Q96PH1 765 aa15.33■□□□□ 0.04
VCP-201ENST00000358901 CALCOCO2Q13137 446 aa15.33■□□□□ 0.04
VCP-201ENST00000358901 DPCR1Q3MIW9 517 aa15.33■□□□□ 0.04
VCP-201ENST00000358901 MSL1Q68DK7 614 aa15.33■□□□□ 0.04
VCP-201ENST00000358901 CCDC50Q8IVM0 306 aa15.33■□□□□ 0.04
VCP-201ENST00000358901 GPR161Q8N6U8 529 aaKnown RBP15.33■□□□□ 0.04
VCP-201ENST00000358901 STMN4Q9H169 189 aaPredicted RBP15.33■□□□□ 0.04
VCP-201ENST00000358901 SND1Q7KZF4 910 aaKnown RBP eCLIP15.32■□□□□ 0.042e-7■■■□□ 16
VCP-201ENST00000358901 SDR42E1Q8WUS8 393 aa15.32■□□□□ 0.04
VCP-201ENST00000358901 RTEL1Q9NZ71 1219 aa15.32■□□□□ 0.04
VCP-201ENST00000358901 GOLGA6BA6NDN3 693 aa15.32■□□□□ 0.04
VCP-201ENST00000358901 UFL1O94874 794 aa15.32■□□□□ 0.04
VCP-201ENST00000358901 KRT25Q7Z3Z0 450 aa15.32■□□□□ 0.04
VCP-201ENST00000358901 CCDC84Q86UT8 332 aaPredicted RBP15.32■□□□□ 0.04
VCP-201ENST00000358901 DDX12PQ92771 950 aa15.32■□□□□ 0.04
VCP-201ENST00000358901 IQCGQ9H095 443 aaKnown RBP15.32■□□□□ 0.04
VCP-201ENST00000358901 NLRC4Q9NPP4 1024 aa15.32■□□□□ 0.04
VCP-201ENST00000358901 TBC1D7Q9P0N9 293 aa15.32■□□□□ 0.04
VCP-201ENST00000358901 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.32■□□□□ 0.04
VCP-201ENST00000358901 A0A1W2PQ27 194 aa15.32■□□□□ 0.04
VCP-201ENST00000358901 A0A1W2PQ64 194 aa15.32■□□□□ 0.04
VCP-201ENST00000358901 A0A1W2PQD8 194 aa15.32■□□□□ 0.04
VCP-201ENST00000358901 CABP7Q86V35 215 aa15.32■□□□□ 0.04
VCP-201ENST00000358901 CCDC26Q8TAB7 109 aa15.32■□□□□ 0.04
VCP-201ENST00000358901 IMPG2Q9BZV3 1241 aa15.32■□□□□ 0.04
VCP-201ENST00000358901 DNAI2Q9GZS0 605 aa15.32■□□□□ 0.04
VCP-201ENST00000358901 VEZTQ9HBM0 779 aa15.32■□□□□ 0.04
VCP-201ENST00000358901 EPB41P11171 864 aaKnown RBP15.31■□□□□ 0.04
VCP-201ENST00000358901 CTSWP56202 376 aa15.31■□□□□ 0.04
VCP-201ENST00000358901 VWA3BQ502W6 1294 aa15.31■□□□□ 0.04
VCP-201ENST00000358901 C11orf57Q6ZUT1 292 aaPredicted RBP15.31■□□□□ 0.04
VCP-201ENST00000358901 TRIM31Q9BZY9 425 aa15.31■□□□□ 0.04
VCP-201ENST00000358901 TNKSO95271 1327 aa15.31■□□□□ 0.04
VCP-201ENST00000358901 PBRM1Q86U86 1689 aa15.31■□□□□ 0.04
VCP-201ENST00000358901 ADORA1P30542 326 aa15.31■□□□□ 0.04
VCP-201ENST00000358901 NF2P35240 595 aa15.31■□□□□ 0.04
VCP-201ENST00000358901 PPP1R7Q15435 360 aa15.31■□□□□ 0.04
VCP-201ENST00000358901 NELFCDQ8IXH7 590 aa15.31■□□□□ 0.04
VCP-201ENST00000358901 EEF2KMTQ96G04 330 aa15.31■□□□□ 0.04
VCP-201ENST00000358901 KCNK9Q9NPC2 374 aa15.31■□□□□ 0.04
VCP-201ENST00000358901 PKD2L1Q9P0L9 805 aa15.31■□□□□ 0.04
VCP-201ENST00000358901 ZMYM6O95789 1325 aa15.31■□□□□ 0.04
VCP-201ENST00000358901 ATP2A1O14983 1001 aa15.31■□□□□ 0.04
VCP-201ENST00000358901 TTLL12Q14166 644 aaPredicted RBP15.31■□□□□ 0.04
VCP-201ENST00000358901 ZMYM1Q5SVZ6 1142 aa15.31■□□□□ 0.04
VCP-201ENST00000358901 MAPKAPK5Q8IW41 473 aa15.31■□□□□ 0.04
VCP-201ENST00000358901 MTUS1Q9ULD2 1270 aa15.31■□□□□ 0.04
VCP-201ENST00000358901 WDR66Q8TBY9 1149 aa15.31■□□□□ 0.04
VCP-201ENST00000358901 FRMD4BQ9Y2L6 1034 aa15.31■□□□□ 0.04
VCP-201ENST00000358901 SAR1BQ9Y6B6 198 aa15.31■□□□□ 0.04
VCP-201ENST00000358901 CEP170Q5SW79 1584 aa15.3■□□□□ 0.04
VCP-201ENST00000358901 CHMP2AO43633 222 aa15.3■□□□□ 0.04
VCP-201ENST00000358901 CEP104O60308 925 aa15.3■□□□□ 0.04
VCP-201ENST00000358901 ZBTB16Q05516 673 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms