RNA–Protein interactions for RNA: ENST00000358763.6

SYN3-202, Transcript of synapsin III, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYN3, Length 3,126 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-202ENST00000358763 CDKL5O76039 1030 aa13.97□□□□□ -0.17
SYN3-202ENST00000358763 CACNB3P54284 484 aa13.97□□□□□ -0.17
SYN3-202ENST00000358763 SLC26A6Q9BXS9 759 aa13.97□□□□□ -0.17
SYN3-202ENST00000358763 IARSP41252 1262 aaKnown RBP13.96□□□□□ -0.17
SYN3-202ENST00000358763 TGFB2P61812 414 aa13.96□□□□□ -0.17
SYN3-202ENST00000358763 CAVIN1Q6NZI2 390 aaKnown RBP13.96□□□□□ -0.17
SYN3-202ENST00000358763 PSMD1Q99460 953 aa13.96□□□□□ -0.17
SYN3-202ENST00000358763 TFIP11Q9UBB9 837 aaKnown RBP13.96□□□□□ -0.17
SYN3-202ENST00000358763 RAD17O75943 681 aa13.96□□□□□ -0.18
SYN3-202ENST00000358763 NFIAQ12857 509 aa13.96□□□□□ -0.18
SYN3-202ENST00000358763 FANCBQ8NB91 859 aa13.96□□□□□ -0.18
SYN3-202ENST00000358763 RBM27Q9P2N5 1060 aaKnown RBP13.96□□□□□ -0.18
SYN3-202ENST00000358763 ECM29Q5VYK3 1845 aa13.96□□□□□ -0.18
SYN3-202ENST00000358763 RASA1P20936 1047 aa13.95□□□□□ -0.18
SYN3-202ENST00000358763 CDK8P49336 464 aa13.95□□□□□ -0.18
SYN3-202ENST00000358763 CATIPQ7Z7H3 387 aa13.95□□□□□ -0.18
SYN3-202ENST00000358763 ALG1Q9BT22 464 aa13.95□□□□□ -0.18
SYN3-202ENST00000358763 NID2Q14112 1375 aa13.95□□□□□ -0.18
SYN3-202ENST00000358763 TSPY3P0CV98 308 aa13.95□□□□□ -0.18
SYN3-202ENST00000358763 TSPY8P0CW00 308 aa13.95□□□□□ -0.18
SYN3-202ENST00000358763 FKBP1AP62942 108 aaKnown RBP13.95□□□□□ -0.18
SYN3-202ENST00000358763 KRT85P78386 507 aa13.95□□□□□ -0.18
SYN3-202ENST00000358763 DALRD3Q5D0E6 543 aaKnown RBP13.95□□□□□ -0.18
SYN3-202ENST00000358763 C16orf86Q6ZW13 317 aa13.95□□□□□ -0.18
SYN3-202ENST00000358763 ZNF444Q8N0Y2 327 aaPredicted RBP13.95□□□□□ -0.18
SYN3-202ENST00000358763 IL17RBQ9NRM6 502 aa13.95□□□□□ -0.18
SYN3-202ENST00000358763 RCSD1Q6JBY9 416 aa13.95□□□□□ -0.18
SYN3-202ENST00000358763 ZDHHC15Q96MV8 337 aa13.95□□□□□ -0.18
SYN3-202ENST00000358763 SSRP1Q08945 709 aaKnown RBP13.94□□□□□ -0.18
SYN3-202ENST00000358763 GRIPAP1Q4V328 841 aa13.94□□□□□ -0.18
SYN3-202ENST00000358763 TMEM87AQ8NBN3 555 aa13.94□□□□□ -0.18
SYN3-202ENST00000358763 IFNAR1P17181 557 aa13.94□□□□□ -0.18
SYN3-202ENST00000358763 GUCY1A2P33402 732 aa13.94□□□□□ -0.18
SYN3-202ENST00000358763 FBXO18Q8NFZ0 1043 aa13.94□□□□□ -0.18
SYN3-202ENST00000358763 ZSCAN16Q9H4T2 348 aaPredicted RBP13.94□□□□□ -0.18
SYN3-202ENST00000358763 TCP10Q12799 353 aa13.93□□□□□ -0.18
SYN3-202ENST00000358763 TROAPQ12815 778 aa13.93□□□□□ -0.18
SYN3-202ENST00000358763 TTC6Q86TZ1 520 aa13.93□□□□□ -0.18
SYN3-202ENST00000358763 SGIP1Q9BQI5 828 aa13.93□□□□□ -0.18
SYN3-202ENST00000358763 OSBPL5Q9H0X9 879 aaPredicted RBP13.93□□□□□ -0.18
SYN3-202ENST00000358763 PSMD14O00487 310 aa13.93□□□□□ -0.18
SYN3-202ENST00000358763 PLEKHA8P1O95397 391 aa13.93□□□□□ -0.18
SYN3-202ENST00000358763 FMNL1O95466 1100 aaPredicted RBP13.93□□□□□ -0.18
SYN3-202ENST00000358763 SLURP2P0DP57 97 aa13.93□□□□□ -0.18
SYN3-202ENST00000358763 CEBPZQ03701 1054 aaKnown RBP13.93□□□□□ -0.18
SYN3-202ENST00000358763 ZFPM1Q8IX07 1006 aa13.93□□□□□ -0.18
SYN3-202ENST00000358763 FTOQ9C0B1 505 aaKnown RBP eCLIP13.93□□□□□ -0.18
SYN3-202ENST00000358763 MTMR7Q9Y216 660 aa13.93□□□□□ -0.18
SYN3-202ENST00000358763 ZBTB12Q9Y330 459 aaPredicted RBP13.93□□□□□ -0.18
SYN3-202ENST00000358763 CCDC196A0A1B0GTZ2 297 aa13.93□□□□□ -0.18
SYN3-202ENST00000358763 RCAN1P53805 252 aa13.93□□□□□ -0.18
SYN3-202ENST00000358763 ZNF287Q9HBT7 754 aa13.93□□□□□ -0.18
SYN3-202ENST00000358763 STX8Q9UNK0 236 aa13.93□□□□□ -0.18
SYN3-202ENST00000358763 BCS1LQ9Y276 419 aa13.93□□□□□ -0.18
SYN3-202ENST00000358763 BRCA1P38398 1863 aaKnown RBP13.92□□□□□ -0.18
SYN3-202ENST00000358763 hCG_1642624A0A1W2PR95 340 aa13.92□□□□□ -0.18
SYN3-202ENST00000358763 MBD3O95983 291 aa13.92□□□□□ -0.18
SYN3-202ENST00000358763 SOGA3Q5TF21 947 aa13.92□□□□□ -0.18
SYN3-202ENST00000358763 NBPF11Q86T75 865 aa13.92□□□□□ -0.18
SYN3-202ENST00000358763 KAT14Q9H8E8 782 aa13.92□□□□□ -0.18
SYN3-202ENST00000358763 STK36Q9NRP7 1315 aa13.92□□□□□ -0.18
SYN3-202ENST00000358763 DDAH1O94760 285 aa13.92□□□□□ -0.18
SYN3-202ENST00000358763 PTGER2P43116 358 aa13.92□□□□□ -0.18
SYN3-202ENST00000358763 CFAP100Q494V2 611 aa13.92□□□□□ -0.18
SYN3-202ENST00000358763 KRT40Q6A162 431 aa13.92□□□□□ -0.18
SYN3-202ENST00000358763 NIM1KQ8IY84 436 aa13.92□□□□□ -0.18
SYN3-202ENST00000358763 TRIM22Q8IYM9 498 aa13.92□□□□□ -0.18
SYN3-202ENST00000358763 CRACR2BQ8N4Y2 399 aaPredicted RBP13.92□□□□□ -0.18
SYN3-202ENST00000358763 TDRD3Q9H7E2 651 aaKnown RBP13.92□□□□□ -0.18
SYN3-202ENST00000358763 TMEM63CQ9P1W3 806 aa13.92□□□□□ -0.18
SYN3-202ENST00000358763 SERPINA10Q9UK55 444 aa13.92□□□□□ -0.18
SYN3-202ENST00000358763 UTRNP46939 3433 aa13.92□□□□□ -0.18
SYN3-202ENST00000358763 PSME4Q14997 1843 aa13.91□□□□□ -0.18
SYN3-202ENST00000358763 KIF28PB7ZC32 967 aa13.91□□□□□ -0.18
SYN3-202ENST00000358763 HDLBPQ00341 1268 aaKnown RBP13.91□□□□□ -0.18
SYN3-202ENST00000358763 RSBN1LQ6PCB5 846 aaPredicted RBP13.91□□□□□ -0.18
SYN3-202ENST00000358763 SPATA32Q96LK8 384 aa13.91□□□□□ -0.18
SYN3-202ENST00000358763 MYH15Q9Y2K3 1946 aa13.91□□□□□ -0.18
SYN3-202ENST00000358763 CSPP1Q1MSJ5 1256 aa13.91□□□□□ -0.18
SYN3-202ENST00000358763 PNMA1Q8ND90 353 aa13.91□□□□□ -0.18
SYN3-202ENST00000358763 CTCFLQ8NI51 663 aaPredicted RBP13.91□□□□□ -0.18
SYN3-202ENST00000358763 TAOK3Q9H2K8 898 aa13.91□□□□□ -0.18
SYN3-202ENST00000358763 CALM1P0DP23 149 aa13.9□□□□□ -0.18
SYN3-202ENST00000358763 CALM2P0DP24 149 aa13.9□□□□□ -0.18
SYN3-202ENST00000358763 CALM3P0DP25 149 aa13.9□□□□□ -0.18
SYN3-202ENST00000358763 MRIQ9BWK5 157 aa13.9□□□□□ -0.18
SYN3-202ENST00000358763 FAM198AQ9UFP1 575 aa13.9□□□□□ -0.18
SYN3-202ENST00000358763 UBE2HP62256 183 aa13.9□□□□□ -0.18
SYN3-202ENST00000358763 KIF23Q02241 960 aaPredicted RBP13.9□□□□□ -0.18
SYN3-202ENST00000358763 GABPAQ06546 454 aa13.9□□□□□ -0.18
SYN3-202ENST00000358763 RASGRP2Q7LDG7 609 aa13.9□□□□□ -0.18
SYN3-202ENST00000358763 DGKHQ86XP1 1220 aa13.9□□□□□ -0.18
SYN3-202ENST00000358763 LEO1Q8WVC0 666 aaPredicted RBP13.9□□□□□ -0.18
SYN3-202ENST00000358763 PRMT6Q96LA8 375 aaPredicted RBP13.9□□□□□ -0.18
SYN3-202ENST00000358763 SERPINB13Q9UIV8 391 aa13.9□□□□□ -0.18
SYN3-202ENST00000358763 FAM196BA6NMK8 535 aa13.9□□□□□ -0.18
SYN3-202ENST00000358763 NFKBIEO00221 500 aa13.9□□□□□ -0.18
SYN3-202ENST00000358763 TRIM29Q14134 588 aa13.9□□□□□ -0.18
SYN3-202ENST00000358763 ZSCAN29Q8IWY8 852 aaPredicted RBP13.9□□□□□ -0.18
SYN3-202ENST00000358763 NLGN2Q8NFZ4 835 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms