RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 PODXLO00592 558 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 TMEM67Q5HYA8 995 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 LRIG3Q6UXM1 1119 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 YTHDF3Q7Z739 585 aaKnown RBP4.58□□□□□ -1.68
SYNE2-204ENST00000358025 CALML4Q96GE6 196 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 FUCA2Q9BTY2 467 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 LRRD1A4D1F6 860 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 MEFVO15553 781 aaPredicted RBP4.58□□□□□ -1.68
SYNE2-204ENST00000358025 PROM2Q8N271 834 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 STRN4Q9NRL3 753 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 ZNF189O75820 626 aaPredicted RBP4.58□□□□□ -1.68
SYNE2-204ENST00000358025 DYNC1I2Q13409 638 aaKnown RBP4.58□□□□□ -1.68
SYNE2-204ENST00000358025 RPS6KA1Q15418 735 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 FERMT3Q86UX7 667 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 PLCG2P16885 1265 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 KPNB1Q14974 876 aaKnown RBP4.58□□□□□ -1.68
SYNE2-204ENST00000358025 IQCB1Q15051 598 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 RRAGBQ5VZM2 374 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 Q6ZUG5 572 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 RAB11FIP4Q86YS3 637 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 CARD10Q9BWT7 1032 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 VCX3AQ9NNX9 186 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 SH3GLB2Q9NR46 395 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 TYW1Q9NV66 732 aaKnown RBP4.58□□□□□ -1.68
SYNE2-204ENST00000358025 WDR17Q8IZU2 1322 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 CCDC93Q567U6 631 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 KLHL10Q6JEL2 608 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 COG1Q8WTW3 980 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 IFIT5Q13325 482 aaKnown RBP4.58□□□□□ -1.68
SYNE2-204ENST00000358025 SREK1Q8WXA9 508 aaKnown RBP4.58□□□□□ -1.68
SYNE2-204ENST00000358025 E4F1Q66K89 784 aaPredicted RBP4.58□□□□□ -1.68
SYNE2-204ENST00000358025 SRLQ86TD4 932 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 MORC4Q8TE76 937 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 TRPM1Q7Z4N2 1603 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 GADD45BO75293 160 aaPredicted RBP4.58□□□□□ -1.68
SYNE2-204ENST00000358025 LDHCP07864 332 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 ABCD1P33897 745 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 NR1H3Q13133 447 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 COPRSQ9NQ92 184 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 FOSBP53539 338 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 NAA25Q14CX7 972 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 BBOF1Q8ND07 529 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 HYOU1Q9Y4L1 999 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 NECAB1Q8N987 351 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 PNMA2Q9UL42 364 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 SRPRBQ9Y5M8 271 aaKnown RBP4.58□□□□□ -1.68
SYNE2-204ENST00000358025 TRPM2O94759 1503 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 MYH10P35580 1976 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 BCORL1Q5H9F3 1711 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 MTIF2P46199 727 aaKnown RBP4.58□□□□□ -1.68
SYNE2-204ENST00000358025 FUT8Q9BYC5 575 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 KLHL14Q9P2G3 628 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 EMILIN1Q9Y6C2 1016 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 VIRMAQ69YN4 1812 aaKnown RBP4.58□□□□□ -1.68
SYNE2-204ENST00000358025 GRID2IPA4D2P6 1211 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 SMARCA5O60264 1052 aaPredicted RBP4.58□□□□□ -1.68
SYNE2-204ENST00000358025 PDE4BQ07343 736 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 AKAP4Q5JQC9 854 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 FOXP3Q9BZS1 431 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 GOLGA8AA7E2F4 631 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 CES2O00748 559 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 TMEM266Q2M3C6 531 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 LGSNQ5TDP6 509 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 DENND2CQ68D51 928 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 KIF6Q6ZMV9 814 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 A0A1W2PQC6 194 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 ABLIM1O14639 778 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 ZNF526Q8TF50 670 aaPredicted RBP4.58□□□□□ -1.68
SYNE2-204ENST00000358025 SYN2Q92777 582 aaPredicted RBP4.58□□□□□ -1.68
SYNE2-204ENST00000358025 THOC1Q96FV9 657 aaKnown RBP4.58□□□□□ -1.68
SYNE2-204ENST00000358025 PLEKHG2Q9H7P9 1386 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 MAP3K21Q5TCX8 1036 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 TCEAL9Q9UHQ7 104 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 ZNF608Q9ULD9 1512 aaPredicted RBP4.58□□□□□ -1.68
SYNE2-204ENST00000358025 CCDC188H7C350 402 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 PPP4R3CPQ6ZMV5 832 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 TBC1D22AQ8WUA7 517 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 Q9H521 79 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 UBN2Q6ZU65 1347 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 SH3TC1Q8TE82 1336 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 POLR3DP05423 398 aaPredicted RBP4.58□□□□□ -1.68
SYNE2-204ENST00000358025 CAV1Q03135 178 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 IP6K1Q92551 441 aa4.58□□□□□ -1.68
SYNE2-204ENST00000358025 KCNB1Q14721 858 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 CCDC197Q8NCU1 140 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 FAM81BQ96LP2 452 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 FGFR1OP2Q9NVK5 253 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.57□□□□□ -1.68
SYNE2-204ENST00000358025 PSMD2Q13200 908 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 STK17AQ9UEE5 414 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 PYCARDQ9ULZ3 195 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 LIFRP42702 1097 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 NMIQ13287 307 aaPredicted RBP4.57□□□□□ -1.68
SYNE2-204ENST00000358025 SDCCAG8Q86SQ7 713 aaPredicted RBP4.57□□□□□ -1.68
SYNE2-204ENST00000358025 PDE11AQ9HCR9 933 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 USP40Q9NVE5 1235 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 MAP3K2Q9Y2U5 619 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 FLT4P35916 1363 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 NPATQ14207 1427 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 FAM177BA6PVY3 158 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms