RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 CCDC197Q8NCU1 140 aa7.29□□□□□ -1.24
VPS13B-202ENST00000357162 PANX2Q96RD6 677 aa7.29□□□□□ -1.24
VPS13B-202ENST00000357162 UBE4BO95155 1302 aa7.29□□□□□ -1.24
VPS13B-202ENST00000357162 ESRRGP62508 458 aa7.29□□□□□ -1.24
VPS13B-202ENST00000357162 SYT10Q6XYQ8 523 aa7.29□□□□□ -1.24
VPS13B-202ENST00000357162 SYNCQ9H7C4 482 aa7.29□□□□□ -1.24
VPS13B-202ENST00000357162 HLA-DOAP06340 250 aa7.29□□□□□ -1.24
VPS13B-202ENST00000357162 SNRPA1P09661 255 aaKnown RBP7.29□□□□□ -1.24
VPS13B-202ENST00000357162 ZNF444Q8N0Y2 327 aaPredicted RBP7.29□□□□□ -1.24
VPS13B-202ENST00000357162 CDC23Q9UJX2 597 aa7.29□□□□□ -1.24
VPS13B-202ENST00000357162 FRMD4BQ9Y2L6 1034 aa7.29□□□□□ -1.24
VPS13B-202ENST00000357162 KRT2P35908 639 aa7.29□□□□□ -1.24
VPS13B-202ENST00000357162 SYCP3Q8IZU3 236 aa7.29□□□□□ -1.24
VPS13B-202ENST00000357162 TARSL2A2RTX5 802 aaKnown RBP7.29□□□□□ -1.24
VPS13B-202ENST00000357162 MLECQ14165 292 aa7.29□□□□□ -1.24
VPS13B-202ENST00000357162 GTF3C6Q969F1 213 aa7.29□□□□□ -1.24
VPS13B-202ENST00000357162 NCAPGQ9BPX3 1015 aa7.29□□□□□ -1.24
VPS13B-202ENST00000357162 SGSM2O43147 1006 aa7.29□□□□□ -1.24
VPS13B-202ENST00000357162 FANCCQ00597 558 aa7.29□□□□□ -1.24
VPS13B-202ENST00000357162 PPP1R7Q15435 360 aa7.29□□□□□ -1.24
VPS13B-202ENST00000357162 MICU3Q86XE3 530 aa7.29□□□□□ -1.24
VPS13B-202ENST00000357162 GUCA1BQ9UMX6 200 aa7.29□□□□□ -1.24
VPS13B-202ENST00000357162 MYH15Q9Y2K3 1946 aa7.29□□□□□ -1.24
VPS13B-202ENST00000357162 DKC1O60832 514 aaKnown RBP eCLIP7.28□□□□□ -1.24
VPS13B-202ENST00000357162 BCRP11274 1271 aa7.28□□□□□ -1.24
VPS13B-202ENST00000357162 DNM2P50570 870 aa7.28□□□□□ -1.24
VPS13B-202ENST00000357162 EXOC7Q9UPT5 735 aa7.28□□□□□ -1.24
VPS13B-202ENST00000357162 WASLO00401 505 aaPredicted RBP7.28□□□□□ -1.24
VPS13B-202ENST00000357162 CMA1P23946 247 aa7.28□□□□□ -1.24
VPS13B-202ENST00000357162 SLC20A2Q08357 652 aa7.28□□□□□ -1.24
VPS13B-202ENST00000357162 POSTNQ15063 836 aa7.28□□□□□ -1.24
VPS13B-202ENST00000357162 VIPAS39Q9H9C1 493 aa7.28□□□□□ -1.24
VPS13B-202ENST00000357162 MEX3CQ5U5Q3 659 aaKnown RBP7.28□□□□□ -1.24
VPS13B-202ENST00000357162 SARM1Q6SZW1 724 aa7.28□□□□□ -1.24
VPS13B-202ENST00000357162 VIRMAQ69YN4 1812 aaKnown RBP7.28□□□□□ -1.24
VPS13B-202ENST00000357162 CFAP73A6NFT4 308 aa7.28□□□□□ -1.24
VPS13B-202ENST00000357162 ZNF202O95125 648 aa7.28□□□□□ -1.24
VPS13B-202ENST00000357162 MUM1Q2TAK8 710 aa7.28□□□□□ -1.24
VPS13B-202ENST00000357162 MICAL1Q8TDZ2 1067 aa7.28□□□□□ -1.24
VPS13B-202ENST00000357162 OLFM3Q96PB7 478 aa7.28□□□□□ -1.24
VPS13B-202ENST00000357162 UHRF1BP1LA0JNW5 1464 aa7.28□□□□□ -1.24
VPS13B-202ENST00000357162 CHUKO15111 745 aa7.28□□□□□ -1.24
VPS13B-202ENST00000357162 SMTNP53814 917 aa7.28□□□□□ -1.24
VPS13B-202ENST00000357162 MIER3Q7Z3K6 550 aa7.28□□□□□ -1.24
VPS13B-202ENST00000357162 LZICQ8WZA0 190 aa7.28□□□□□ -1.24
VPS13B-202ENST00000357162 TSPYL2Q9H2G4 693 aaPredicted RBP7.28□□□□□ -1.24
VPS13B-202ENST00000357162 NFE2L3Q9Y4A8 694 aa7.28□□□□□ -1.24
VPS13B-202ENST00000357162 KDM3AQ9Y4C1 1321 aa7.28□□□□□ -1.24
VPS13B-202ENST00000357162 UNC13CQ8NB66 2214 aa7.28□□□□□ -1.24
VPS13B-202ENST00000357162 GFAPP14136 432 aa7.28□□□□□ -1.24
VPS13B-202ENST00000357162 SLC4A8Q2Y0W8 1093 aa7.28□□□□□ -1.24
VPS13B-202ENST00000357162 OSBPL3Q9H4L5 887 aa7.28□□□□□ -1.24
VPS13B-202ENST00000357162 WNK2Q9Y3S1 2297 aa7.28□□□□□ -1.24
VPS13B-202ENST00000357162 KSR2Q6VAB6 950 aa7.28□□□□□ -1.24
VPS13B-202ENST00000357162 STAG1Q8WVM7 1258 aa7.28□□□□□ -1.24
VPS13B-202ENST00000357162 MTA3Q9BTC8 594 aa7.28□□□□□ -1.24
VPS13B-202ENST00000357162 CACNA1GO43497 2377 aa7.28□□□□□ -1.24
VPS13B-202ENST00000357162 EDC4Q6P2E9 1401 aaKnown RBP7.28□□□□□ -1.24
VPS13B-202ENST00000357162 RNF8O76064 485 aa7.28□□□□□ -1.24
VPS13B-202ENST00000357162 MKRN3Q13064 507 aaKnown RBP7.28□□□□□ -1.24
VPS13B-202ENST00000357162 VSIG1Q86XK7 387 aa7.28□□□□□ -1.24
VPS13B-202ENST00000357162 DSCC1Q9BVC3 393 aa7.28□□□□□ -1.24
VPS13B-202ENST00000357162 KIAA1468Q9P260 1216 aa7.28□□□□□ -1.24
VPS13B-202ENST00000357162 AHCTF1Q8WYP5 2266 aa7.28□□□□□ -1.24
VPS13B-202ENST00000357162 ABCC10Q5T3U5 1492 aa7.28□□□□□ -1.24
VPS13B-202ENST00000357162 ANO9A1A5B4 782 aa7.28□□□□□ -1.24
VPS13B-202ENST00000357162 CCDC160A6NGH7 325 aa7.28□□□□□ -1.24
VPS13B-202ENST00000357162 YY1AP1Q9H869 796 aa7.28□□□□□ -1.24
VPS13B-202ENST00000357162 SCOCQ9UIL1 159 aa7.28□□□□□ -1.24
VPS13B-202ENST00000357162 IPO5O00410 1097 aaKnown RBP7.28□□□□□ -1.24
VPS13B-202ENST00000357162 PDE6CP51160 858 aa7.28□□□□□ -1.24
VPS13B-202ENST00000357162 KAT14Q9H8E8 782 aa7.28□□□□□ -1.24
VPS13B-202ENST00000357162 SBNO1A3KN83 1393 aa7.27□□□□□ -1.24
VPS13B-202ENST00000357162 RFX7Q2KHR2 1363 aa7.27□□□□□ -1.24
VPS13B-202ENST00000357162 DISP3Q9P2K9 1392 aa7.27□□□□□ -1.24
VPS13B-202ENST00000357162 CRACR2BQ8N4Y2 399 aaPredicted RBP7.27□□□□□ -1.24
VPS13B-202ENST00000357162 IL1RAPL2Q9NP60 686 aa7.27□□□□□ -1.24
VPS13B-202ENST00000357162 TESK2Q96S53 571 aa7.27□□□□□ -1.25
VPS13B-202ENST00000357162 BOLA2Q9H3K6 86 aa7.27□□□□□ -1.25
VPS13B-202ENST00000357162 MKNK2Q9HBH9 465 aa7.27□□□□□ -1.25
VPS13B-202ENST00000357162 NDE1Q9NXR1 346 aa7.27□□□□□ -1.25
VPS13B-202ENST00000357162 WDR7Q9Y4E6 1490 aa7.27□□□□□ -1.25
VPS13B-202ENST00000357162 SATB2Q9UPW6 733 aa7.27□□□□□ -1.25
VPS13B-202ENST00000357162 URB2Q14146 1524 aaKnown RBP7.27□□□□□ -1.25
VPS13B-202ENST00000357162 CACNA1EQ15878 2313 aa7.27□□□□□ -1.25
VPS13B-202ENST00000357162 TBC1D8BQ0IIM8 1120 aa7.27□□□□□ -1.25
VPS13B-202ENST00000357162 KRT71Q3SY84 523 aa7.27□□□□□ -1.25
VPS13B-202ENST00000357162 TTLL7Q6ZT98 887 aa7.27□□□□□ -1.25
VPS13B-202ENST00000357162 VPS52Q8N1B4 723 aa7.27□□□□□ -1.25
VPS13B-202ENST00000357162 TRIM11Q96F44 468 aa7.27□□□□□ -1.25
VPS13B-202ENST00000357162 SH3GL3Q99963 347 aa7.27□□□□□ -1.25
VPS13B-202ENST00000357162 HYOU1Q9Y4L1 999 aa7.27□□□□□ -1.25
VPS13B-202ENST00000357162 BIN1O00499 593 aa7.27□□□□□ -1.25
VPS13B-202ENST00000357162 AK2P54819 239 aa7.27□□□□□ -1.25
VPS13B-202ENST00000357162 RRS1Q15050 365 aaKnown RBP7.27□□□□□ -1.25
VPS13B-202ENST00000357162 IFIT1BQ5T764 474 aaKnown RBP7.27□□□□□ -1.25
VPS13B-202ENST00000357162 NME8Q8N427 588 aa7.27□□□□□ -1.25
VPS13B-202ENST00000357162 BICD1Q96G01 975 aa7.27□□□□□ -1.25
VPS13B-202ENST00000357162 RIMS2Q9UQ26 1411 aa7.27□□□□□ -1.25
VPS13B-202ENST00000357162 ARHGEF11O15085 1522 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms