RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 SLC12A2P55011 1212 aa12.73□□□□□ -0.37
SPTBN1-202ENST00000356805 ZYXQ15942 572 aaKnown RBP12.73□□□□□ -0.37
SPTBN1-202ENST00000356805 HHATQ5VTY9 493 aa12.73□□□□□ -0.37
SPTBN1-202ENST00000356805 ASIC3Q9UHC3 531 aa12.73□□□□□ -0.37
SPTBN1-202ENST00000356805 AMOTL2Q9Y2J4 779 aa12.73□□□□□ -0.37
SPTBN1-202ENST00000356805 ABL1P00519 1130 aa12.73□□□□□ -0.37
SPTBN1-202ENST00000356805 TFCP2L1Q9NZI6 479 aa12.73□□□□□ -0.37
SPTBN1-202ENST00000356805 DCUN1D2Q6PH85 259 aa12.73□□□□□ -0.37
SPTBN1-202ENST00000356805 CARD10Q9BWT7 1032 aa12.73□□□□□ -0.37
SPTBN1-202ENST00000356805 BAIAP2L1Q9UHR4 511 aa12.73□□□□□ -0.37
SPTBN1-202ENST00000356805 PSDA5PKW4 1024 aaPredicted RBP12.73□□□□□ -0.37
SPTBN1-202ENST00000356805 CNGA1P29973 690 aa12.73□□□□□ -0.37
SPTBN1-202ENST00000356805 SYCE1Q8N0S2 351 aa12.73□□□□□ -0.37
SPTBN1-202ENST00000356805 VPS16Q9H269 839 aa12.73□□□□□ -0.37
SPTBN1-202ENST00000356805 TBC1D7Q9P0N9 293 aa12.73□□□□□ -0.37
SPTBN1-202ENST00000356805 SEPT10Q9P0V9 454 aa12.73□□□□□ -0.37
SPTBN1-202ENST00000356805 JRKLQ9Y4A0 524 aa12.73□□□□□ -0.37
SPTBN1-202ENST00000356805 PIK3C2GO75747 1445 aa12.73□□□□□ -0.37
SPTBN1-202ENST00000356805 AK2P54819 239 aa12.73□□□□□ -0.37
SPTBN1-202ENST00000356805 INPP1P49441 399 aa12.72□□□□□ -0.37
SPTBN1-202ENST00000356805 MUM1Q2TAK8 710 aa12.72□□□□□ -0.37
SPTBN1-202ENST00000356805 KIF14Q15058 1648 aa12.72□□□□□ -0.37
SPTBN1-202ENST00000356805 GRM8O00222 908 aa12.72□□□□□ -0.37
SPTBN1-202ENST00000356805 CAPS2Q9BXY5 557 aa12.72□□□□□ -0.37
SPTBN1-202ENST00000356805 RAB17Q9H0T7 212 aa12.72□□□□□ -0.37
SPTBN1-202ENST00000356805 HELBQ8NG08 1087 aaPredicted RBP12.72□□□□□ -0.37
SPTBN1-202ENST00000356805 SECISBP2LQ93073 1101 aaKnown RBP12.72□□□□□ -0.37
SPTBN1-202ENST00000356805 RRP15Q9Y3B9 282 aaKnown RBP12.72□□□□□ -0.37
SPTBN1-202ENST00000356805 PPFIA2O75334 1257 aa12.72□□□□□ -0.37
SPTBN1-202ENST00000356805 ETF1P62495 437 aaKnown RBP12.72□□□□□ -0.37
SPTBN1-202ENST00000356805 BRDTQ58F21 947 aaPredicted RBP12.72□□□□□ -0.37
SPTBN1-202ENST00000356805 HVCN1Q96D96 273 aa12.72□□□□□ -0.37
SPTBN1-202ENST00000356805 LMBRD1Q9NUN5 540 aa12.72□□□□□ -0.37
SPTBN1-202ENST00000356805 POLR3AO14802 1390 aaPredicted RBP12.72□□□□□ -0.37
SPTBN1-202ENST00000356805 FANCCQ00597 558 aa12.72□□□□□ -0.37
SPTBN1-202ENST00000356805 GPIHBP1Q8IV16 184 aa12.72□□□□□ -0.37
SPTBN1-202ENST00000356805 DDX21Q9NR30 783 aaKnown RBP eCLIP12.72□□□□□ -0.37
SPTBN1-202ENST00000356805 RNF123Q5XPI4 1314 aa12.72□□□□□ -0.37
SPTBN1-202ENST00000356805 FNBP4Q8N3X1 1017 aaPredicted RBP12.72□□□□□ -0.37
SPTBN1-202ENST00000356805 STK38LQ9Y2H1 464 aa12.72□□□□□ -0.37
SPTBN1-202ENST00000356805 BEND3Q5T5X7 828 aa12.72□□□□□ -0.37
SPTBN1-202ENST00000356805 MIER3Q7Z3K6 550 aa12.72□□□□□ -0.37
SPTBN1-202ENST00000356805 CCDC84Q86UT8 332 aaPredicted RBP12.72□□□□□ -0.37
SPTBN1-202ENST00000356805 SKA2Q8WVK7 121 aaPredicted RBP12.72□□□□□ -0.37
SPTBN1-202ENST00000356805 DNAJC8O75937 253 aaPredicted RBP12.71□□□□□ -0.37
SPTBN1-202ENST00000356805 PRPF6O94906 941 aaKnown RBP12.71□□□□□ -0.37
SPTBN1-202ENST00000356805 SLC39A6Q13433 755 aa12.71□□□□□ -0.37
SPTBN1-202ENST00000356805 TMTC4Q5T4D3 741 aa12.71□□□□□ -0.37
SPTBN1-202ENST00000356805 KLHL14Q9P2G3 628 aa12.71□□□□□ -0.37
SPTBN1-202ENST00000356805 PDE4DQ08499 809 aa12.71□□□□□ -0.37
SPTBN1-202ENST00000356805 CNNM4Q6P4Q7 775 aa12.71□□□□□ -0.37
SPTBN1-202ENST00000356805 DHX32Q7L7V1 743 aaKnown RBP12.71□□□□□ -0.37
SPTBN1-202ENST00000356805 COPS6Q7L5N1 327 aa12.71□□□□□ -0.37
SPTBN1-202ENST00000356805 CBX8Q9HC52 389 aa12.71□□□□□ -0.37
SPTBN1-202ENST00000356805 SMIM24O75264 130 aa12.71□□□□□ -0.37
SPTBN1-202ENST00000356805 USH1GQ495M9 461 aa12.71□□□□□ -0.37
SPTBN1-202ENST00000356805 ZCRB1Q8TBF4 217 aaKnown RBP12.71□□□□□ -0.37
SPTBN1-202ENST00000356805 PSPC1Q8WXF1 523 aaKnown RBP12.71□□□□□ -0.37
SPTBN1-202ENST00000356805 MYO1AQ9UBC5 1043 aa12.71□□□□□ -0.37
SPTBN1-202ENST00000356805 M0QZ92 97 aa12.71□□□□□ -0.38
SPTBN1-202ENST00000356805 ZMAT2Q96NC0 199 aaKnown RBP12.71□□□□□ -0.38
SPTBN1-202ENST00000356805 PSMB7Q99436 277 aa12.71□□□□□ -0.38
SPTBN1-202ENST00000356805 DBN1Q16643 649 aa12.71□□□□□ -0.38
SPTBN1-202ENST00000356805 ATP2A3Q93084 1043 aa12.71□□□□□ -0.38
SPTBN1-202ENST00000356805 MED10Q9BTT4 135 aa12.71□□□□□ -0.38
SPTBN1-202ENST00000356805 TSPYL2Q9H2G4 693 aaPredicted RBP12.71□□□□□ -0.38
SPTBN1-202ENST00000356805 CC2D2AQ9P2K1 1620 aa12.71□□□□□ -0.38
SPTBN1-202ENST00000356805 A0A1B0GVL5 298 aa12.7□□□□□ -0.38
SPTBN1-202ENST00000356805 KRT15P19012 456 aa12.7□□□□□ -0.38
SPTBN1-202ENST00000356805 ITKQ08881 620 aa12.7□□□□□ -0.38
SPTBN1-202ENST00000356805 DZIP3Q86Y13 1208 aaKnown RBP12.7□□□□□ -0.38
SPTBN1-202ENST00000356805 TRIM58Q8NG06 486 aa12.7□□□□□ -0.38
SPTBN1-202ENST00000356805 NAP1L4Q99733 375 aaKnown RBP12.7□□□□□ -0.38
SPTBN1-202ENST00000356805 ZRANB1Q9UGI0 708 aa12.7□□□□□ -0.38
SPTBN1-202ENST00000356805 SAR1BQ9Y6B6 198 aa12.7□□□□□ -0.38
SPTBN1-202ENST00000356805 KDM2BQ8NHM5 1336 aa12.7□□□□□ -0.38
SPTBN1-202ENST00000356805 GCNT3O95395 438 aa12.7□□□□□ -0.38
SPTBN1-202ENST00000356805 ATP8B2P98198 1209 aa12.7□□□□□ -0.38
SPTBN1-202ENST00000356805 RTCBQ9Y3I0 505 aaKnown RBP12.7□□□□□ -0.38
SPTBN1-202ENST00000356805 MUM1L1Q5H9M0 696 aa12.7□□□□□ -0.38
SPTBN1-202ENST00000356805 LGSNQ5TDP6 509 aa12.7□□□□□ -0.38
SPTBN1-202ENST00000356805 ARHGEF10LQ9HCE6 1279 aa12.7□□□□□ -0.38
SPTBN1-202ENST00000356805 ZBTB40Q9NUA8 1239 aa12.7□□□□□ -0.38
SPTBN1-202ENST00000356805 ALDH1L1O75891 902 aa12.7□□□□□ -0.38
SPTBN1-202ENST00000356805 CDC25BP30305 580 aa12.7□□□□□ -0.38
SPTBN1-202ENST00000356805 NCAPH2Q6IBW4 605 aa12.7□□□□□ -0.38
SPTBN1-202ENST00000356805 BCAS4Q8TDM0 211 aa12.7□□□□□ -0.38
SPTBN1-202ENST00000356805 PA2G4Q9UQ80 394 aaKnown RBP12.7□□□□□ -0.38
SPTBN1-202ENST00000356805 SSH2Q76I76 1423 aa12.7□□□□□ -0.38
SPTBN1-202ENST00000356805 OATP04181 439 aa12.7□□□□□ -0.38
SPTBN1-202ENST00000356805 TSTA3Q13630 321 aaPredicted RBP12.7□□□□□ -0.38
SPTBN1-202ENST00000356805 MRPL46Q9H2W6 279 aaKnown RBP12.7□□□□□ -0.38
SPTBN1-202ENST00000356805 CD2APQ9Y5K6 639 aa12.7□□□□□ -0.38
SPTBN1-202ENST00000356805 ARHGEF35A5YM69 484 aa12.69□□□□□ -0.38
SPTBN1-202ENST00000356805 WASLO00401 505 aaPredicted RBP12.69□□□□□ -0.38
SPTBN1-202ENST00000356805 ANKRD20A3Q5VUR7 823 aa12.69□□□□□ -0.38
SPTBN1-202ENST00000356805 DENND2CQ68D51 928 aa12.69□□□□□ -0.38
SPTBN1-202ENST00000356805 LMBR1LQ6UX01 489 aa12.69□□□□□ -0.38
SPTBN1-202ENST00000356805 CXorf38Q8TB03 319 aa12.69□□□□□ -0.38
SPTBN1-202ENST00000356805 STAG1Q8WVM7 1258 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms