RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 MRPS25P82663 173 aaKnown RBP14.15□□□□□ -0.14
BDNF-202ENST00000356660 ATRIPQ8WXE1 791 aa14.15□□□□□ -0.14
BDNF-202ENST00000356660 BPIFA3Q9BQP9 254 aa14.15□□□□□ -0.14
BDNF-202ENST00000356660 FUT8Q9BYC5 575 aa14.15□□□□□ -0.14
BDNF-202ENST00000356660 ARAP3Q8WWN8 1544 aa14.15□□□□□ -0.14
BDNF-202ENST00000356660 ERLIN2O94905 339 aa14.15□□□□□ -0.14
BDNF-202ENST00000356660 TFRCP02786 760 aaKnown RBP14.15□□□□□ -0.14
BDNF-202ENST00000356660 ADORA1P30542 326 aa14.15□□□□□ -0.14
BDNF-202ENST00000356660 USPL1Q5W0Q7 1092 aa14.15□□□□□ -0.14
BDNF-202ENST00000356660 TRIM65Q6PJ69 517 aa14.15□□□□□ -0.14
BDNF-202ENST00000356660 TRMT1LQ7Z2T5 733 aaKnown RBP14.15□□□□□ -0.14
BDNF-202ENST00000356660 MIGA1Q8NAN2 632 aa14.15□□□□□ -0.14
BDNF-202ENST00000356660 KAZALD1Q96I82 304 aa14.15□□□□□ -0.14
BDNF-202ENST00000356660 WWC3Q9ULE0 1092 aa14.15□□□□□ -0.14
BDNF-202ENST00000356660 PAFAH1B1P43034 410 aa14.14□□□□□ -0.15
BDNF-202ENST00000356660 MTIF2P46199 727 aaKnown RBP14.14□□□□□ -0.15
BDNF-202ENST00000356660 CTDSPL2Q05D32 466 aa14.14□□□□□ -0.15
BDNF-202ENST00000356660 SLC20A2Q08357 652 aa14.14□□□□□ -0.15
BDNF-202ENST00000356660 SND1Q7KZF4 910 aaKnown RBP eCLIP14.14□□□□□ -0.15
BDNF-202ENST00000356660 FAM71BQ8TC56 605 aa14.14□□□□□ -0.15
BDNF-202ENST00000356660 ZNF652Q9Y2D9 606 aa14.14□□□□□ -0.15
BDNF-202ENST00000356660 GOLGA6L10A6NI86 522 aa14.14□□□□□ -0.15
BDNF-202ENST00000356660 VSNL1P62760 191 aa14.14□□□□□ -0.15
BDNF-202ENST00000356660 PDE4BQ07343 736 aa14.14□□□□□ -0.15
BDNF-202ENST00000356660 NCAPHQ15003 741 aa14.14□□□□□ -0.15
BDNF-202ENST00000356660 OTUD6BQ8N6M0 293 aa14.14□□□□□ -0.15
BDNF-202ENST00000356660 NDUFAB1O14561 156 aa14.14□□□□□ -0.15
BDNF-202ENST00000356660 ZRANB2O95218 330 aaKnown RBP eCLIP14.14□□□□□ -0.15
BDNF-202ENST00000356660 IDEP14735 1019 aa14.14□□□□□ -0.15
BDNF-202ENST00000356660 NR5A1Q13285 461 aa14.14□□□□□ -0.15
BDNF-202ENST00000356660 TMTC1Q8IUR5 882 aa14.14□□□□□ -0.15
BDNF-202ENST00000356660 BCAS4Q8TDM0 211 aa14.14□□□□□ -0.15
BDNF-202ENST00000356660 KIDINS220Q9ULH0 1771 aa14.14□□□□□ -0.15
BDNF-202ENST00000356660 MROH7-TTC4A0A0A0MT08 1334 aa14.13□□□□□ -0.15
BDNF-202ENST00000356660 GOLGA6BA6NDN3 693 aa14.13□□□□□ -0.15
BDNF-202ENST00000356660 MPHOSPH10O00566 681 aaKnown RBP14.13□□□□□ -0.15
BDNF-202ENST00000356660 KRT86O43790 486 aa14.13□□□□□ -0.15
BDNF-202ENST00000356660 CCDC93Q567U6 631 aa14.13□□□□□ -0.15
BDNF-202ENST00000356660 RILPL1Q5EBL4 403 aa14.13□□□□□ -0.15
BDNF-202ENST00000356660 CYP26C1Q6V0L0 522 aa14.13□□□□□ -0.15
BDNF-202ENST00000356660 NOSTRINQ8IVI9 506 aa14.13□□□□□ -0.15
BDNF-202ENST00000356660 STX8Q9UNK0 236 aa14.13□□□□□ -0.15
BDNF-202ENST00000356660 MROH1Q8NDA8 1641 aa14.13□□□□□ -0.15
BDNF-202ENST00000356660 EXOSC10Q01780 885 aaKnown RBP14.13□□□□□ -0.15
BDNF-202ENST00000356660 CKAP4Q07065 602 aaKnown RBP14.13□□□□□ -0.15
BDNF-202ENST00000356660 CCDC91Q7Z6B0 441 aa14.13□□□□□ -0.15
BDNF-202ENST00000356660 METTL16Q86W50 562 aaKnown RBP14.13□□□□□ -0.15
BDNF-202ENST00000356660 PUS7LQ9H0K6 701 aaKnown RBP14.13□□□□□ -0.15
BDNF-202ENST00000356660 PRR29P0C7W0 189 aa14.13□□□□□ -0.15
BDNF-202ENST00000356660 ERCC3P19447 782 aa14.13□□□□□ -0.15
BDNF-202ENST00000356660 INPP5BP32019 993 aa14.13□□□□□ -0.15
BDNF-202ENST00000356660 NLRP5P59047 1200 aa14.13□□□□□ -0.15
BDNF-202ENST00000356660 GSPT2Q8IYD1 628 aaKnown RBP14.13□□□□□ -0.15
BDNF-202ENST00000356660 SIRT1Q96EB6 747 aa14.13□□□□□ -0.15
BDNF-202ENST00000356660 INCENPQ9NQS7 918 aa14.13□□□□□ -0.15
BDNF-202ENST00000356660 SAMM50Q9Y512 469 aa14.13□□□□□ -0.15
BDNF-202ENST00000356660 C6orf229H3BNL8 230 aa14.12□□□□□ -0.15
BDNF-202ENST00000356660 AKR1B10O60218 316 aa14.12□□□□□ -0.15
BDNF-202ENST00000356660 HLTFQ14527 1009 aaKnown RBP eCLIP14.12□□□□□ -0.15
BDNF-202ENST00000356660 MAATS1Q7Z4T9 603 aa14.12□□□□□ -0.15
BDNF-202ENST00000356660 RIN2Q8WYP3 895 aaPredicted RBP14.12□□□□□ -0.15
BDNF-202ENST00000356660 TUBBP07437 444 aa14.12□□□□□ -0.15
BDNF-202ENST00000356660 CYP7A1P22680 504 aa14.12□□□□□ -0.15
BDNF-202ENST00000356660 FMR1Q06787 632 aaKnown RBP eCLIP14.12□□□□□ -0.15
BDNF-202ENST00000356660 ZFYVE27Q5T4F4 411 aa14.12□□□□□ -0.15
BDNF-202ENST00000356660 IFT81Q8WYA0 676 aa14.12□□□□□ -0.15
BDNF-202ENST00000356660 DCAF5Q96JK2 942 aa14.12□□□□□ -0.15
BDNF-202ENST00000356660 USO1O60763 962 aaKnown RBP14.12□□□□□ -0.15
BDNF-202ENST00000356660 HSF2BPO75031 334 aa14.12□□□□□ -0.15
BDNF-202ENST00000356660 KCNJ6P48051 423 aa14.12□□□□□ -0.15
BDNF-202ENST00000356660 KIF5AQ12840 1032 aa14.12□□□□□ -0.15
BDNF-202ENST00000356660 TDRD12Q587J7 1177 aaKnown RBP14.12□□□□□ -0.15
BDNF-202ENST00000356660 APOA5Q6Q788 366 aa14.12□□□□□ -0.15
BDNF-202ENST00000356660 TC2NQ8N9U0 490 aa14.12□□□□□ -0.15
BDNF-202ENST00000356660 SAR1BQ9Y6B6 198 aa14.12□□□□□ -0.15
BDNF-202ENST00000356660 SH3TC1Q8TE82 1336 aa14.12□□□□□ -0.15
BDNF-202ENST00000356660 TSPY2A6NKD2 308 aa14.12□□□□□ -0.15
BDNF-202ENST00000356660 SRGAP2O75044 1071 aa14.12□□□□□ -0.15
BDNF-202ENST00000356660 PPP6R2O75170 966 aa14.12□□□□□ -0.15
BDNF-202ENST00000356660 CYLC1P35663 651 aaPredicted RBP14.12□□□□□ -0.15
BDNF-202ENST00000356660 MAGEA9P43362 315 aa14.12□□□□□ -0.15
BDNF-202ENST00000356660 ATP1A2P50993 1020 aa14.12□□□□□ -0.15
BDNF-202ENST00000356660 TUBB4BP68371 445 aa14.12□□□□□ -0.15
BDNF-202ENST00000356660 WHAMMP3Q1A5X7 153 aa14.12□□□□□ -0.15
BDNF-202ENST00000356660 ILDR1Q86SU0 546 aaPredicted RBP14.12□□□□□ -0.15
BDNF-202ENST00000356660 CEP57Q86XR8 500 aa14.12□□□□□ -0.15
BDNF-202ENST00000356660 ZNF444Q8N0Y2 327 aaPredicted RBP14.12□□□□□ -0.15
BDNF-202ENST00000356660 NIP7Q9Y221 180 aaKnown RBP eCLIP14.12□□□□□ -0.15
BDNF-202ENST00000356660 ADGRG1Q9Y653 693 aa14.12□□□□□ -0.15
BDNF-202ENST00000356660 CDC25AP30304 524 aa14.11□□□□□ -0.15
BDNF-202ENST00000356660 MCM7P33993 719 aa14.11□□□□□ -0.15
BDNF-202ENST00000356660 ATP6V1AP38606 617 aa14.11□□□□□ -0.15
BDNF-202ENST00000356660 RNASE9P60153 205 aaKnown RBP14.11□□□□□ -0.15
BDNF-202ENST00000356660 SPAG1Q07617 926 aa14.11□□□□□ -0.15
BDNF-202ENST00000356660 FOXR1Q6PIV2 292 aa14.11□□□□□ -0.15
BDNF-202ENST00000356660 TTLL7Q6ZT98 887 aa14.11□□□□□ -0.15
BDNF-202ENST00000356660 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.11□□□□□ -0.15
BDNF-202ENST00000356660 VPS54Q9P1Q0 977 aa14.11□□□□□ -0.15
BDNF-202ENST00000356660 HECW2Q9P2P5 1572 aa14.11□□□□□ -0.15
BDNF-202ENST00000356660 PLCD1P51178 756 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms